prot_P-wetherbeei_contig58101.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig58101.1.1
Unique Nameprot_P-wetherbeei_contig58101.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length130
Homology
BLAST of mRNA_P-wetherbeei_contig58101.1.1 vs. uniprot
Match: A0A2E1ED04_9HYPH (Very short patch repair endonuclease n=1 Tax=Parvibaculum sp. TaxID=2024848 RepID=A0A2E1ED04_9HYPH)

HSP 1 Score: 177 bits (449), Expect = 5.510e-55
Identity = 81/121 (66.94%), Postives = 91/121 (75.21%), Query Frame = 0
Query:    1 MQAIKSKDTKPEWIVRRLLHSAGYRYRLHAAQLPGKPDIVFPSRHKVILIHGCFWHGHTCKRGARLPHSNTEYWRQKISNNRARDARTKQLLRKTGWSIHTVWECELKNQKRLLNRLRRFL 121
            M+A+K KDT PEW VRR+LH+AGYRYRLH  +LPGKPD+ FPSR KVI IHGCFWHGH CKRGAR P SN EYWR KIS N  RDA     LR  GWSI  +WECE+K+    LNRL+ FL
Sbjct:   10 MRAVKDKDTAPEWSVRRMLHAAGYRYRLHCKELPGKPDLCFPSRKKVIFIHGCFWHGHNCKRGAREPKSNVEYWRAKISRNCERDAAHMAALRSVGWSILILWECEIKSGTATLNRLKAFL 130          
BLAST of mRNA_P-wetherbeei_contig58101.1.1 vs. uniprot
Match: UPI001C31CA88 (DNA mismatch endonuclease Vsr n=1 Tax=Sphingobium sp. AS12 TaxID=2849495 RepID=UPI001C31CA88)

HSP 1 Score: 171 bits (432), Expect = 1.940e-52
Identity = 74/122 (60.66%), Postives = 93/122 (76.23%), Query Frame = 0
Query:    1 MQAIKSKDTKPEWIVRRLLHSAGYRYRLHAAQLPGKPDIVFPSRHKVILIHGCFWHGHTCKRGARLPHSNTEYWRQKISNNRARDARTKQLLRKTGWSIHTVWECELKNQKRLLNRLRRFLN 122
            M+A++SKDTKPE IVR+L+H  GYRYRLH   LPG PD+VF +R +V+ +HGCFWHGH CKRGAR P +N EYWR+KI  NRARD+R    L   GW + T+WECEL N++ L +RLR FL+
Sbjct:   12 MRAVRSKDTKPEMIVRKLIHGMGYRYRLHRKDLPGSPDLVFAARRRVVFVHGCFWHGHDCKRGARQPKANAEYWREKIERNRARDSRATGGLTANGWLVATIWECELGNREHLKDRLRSFLD 133          
BLAST of mRNA_P-wetherbeei_contig58101.1.1 vs. uniprot
Match: UPI0015DA33CC (DNA mismatch endonuclease Vsr n=1 Tax=Agrobacterium vitis TaxID=373 RepID=UPI0015DA33CC)

HSP 1 Score: 170 bits (430), Expect = 3.550e-52
Identity = 74/122 (60.66%), Postives = 93/122 (76.23%), Query Frame = 0
Query:    1 MQAIKSKDTKPEWIVRRLLHSAGYRYRLHAAQLPGKPDIVFPSRHKVILIHGCFWHGHTCKRGARLPHSNTEYWRQKISNNRARDARTKQLLRKTGWSIHTVWECELKNQKRLLNRLRRFLN 122
            M+A++SKDTKPE IVRRLLHS G+R+RLH   LPG PD+VFP RHKVI +HGCFWHGH C RGAR+P +N  YW  K+  NR RD R+ +LL + GW+   VWECE+K++ RL +R+  FLN
Sbjct:   11 MRAVRSKDTKPELIVRRLLHSLGFRFRLHRRDLPGSPDLVFPGRHKVIFVHGCFWHGHDCSRGARVPKTNQVYWTDKVKRNRERDERSHRLLSELGWTTCVVWECEIKDRVRLTDRVLSFLN 132          
BLAST of mRNA_P-wetherbeei_contig58101.1.1 vs. uniprot
Match: A0A2D4VGN9_9HYPH (Very short patch repair endonuclease n=1 Tax=Parvibaculum sp. TaxID=2024848 RepID=A0A2D4VGN9_9HYPH)

HSP 1 Score: 169 bits (427), Expect = 7.410e-52
Identity = 75/122 (61.48%), Postives = 91/122 (74.59%), Query Frame = 0
Query:    1 MQAIKSKDTKPEWIVRRLLHSAGYRYRLHAAQLPGKPDIVFPSRHKVILIHGCFWHGHTCKRGARLPHSNTEYWRQKISNNRARDARTKQLLRKTGWSIHTVWECELKNQKRLLNRLRRFLN 122
            M+A+K+KDTKPE  VRR+L  AGYRYRLH + LPGKPD+VFPSR K+I +HGCFWHGHTC+RG RLP SN +YW  KI  N  RD      LR  GW  H VWECEL++Q R+  +L+RFL+
Sbjct:    1 MRAVKAKDTKPEMQVRRMLFKAGYRYRLHRSDLPGKPDLVFPSRKKIIFVHGCFWHGHTCRRGNRLPKSNRDYWSSKIKRNVERDRTHLSKLRHLGWVTHIVWECELRDQDRVFQQLKRFLD 122          
BLAST of mRNA_P-wetherbeei_contig58101.1.1 vs. uniprot
Match: UPI0004AE70F9 (DNA mismatch endonuclease Vsr n=1 Tax=Methylopila sp. 73B TaxID=1120792 RepID=UPI0004AE70F9)

HSP 1 Score: 168 bits (425), Expect = 1.490e-51
Identity = 74/121 (61.16%), Postives = 89/121 (73.55%), Query Frame = 0
Query:    1 MQAIKSKDTKPEWIVRRLLHSAGYRYRLHAAQLPGKPDIVFPSRHKVILIHGCFWHGHTCKRGARLPHSNTEYWRQKISNNRARDARTKQLLRKTGWSIHTVWECELKNQKRLLNRLRRFL 121
            M+A+KS+DTKPE +VRR  H+ GYR+RLH   LPG PD+VFP+R KVI +HGCFWHGH C RGAR P +NT+YWR KI+ N ARDAR +  L   GW   T+WECELK   RL  RL+ FL
Sbjct:    1 MRAVKSRDTKPEMLVRRAAHALGYRFRLHRKDLPGSPDLVFPARKKVIFVHGCFWHGHECARGARTPKTNTDYWRAKIARNVARDARARSALDALGWETLTIWECELKKDTRLAERLKSFL 121          
BLAST of mRNA_P-wetherbeei_contig58101.1.1 vs. uniprot
Match: A0A2W4QV52_9PROT (Very short patch repair endonuclease n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4QV52_9PROT)

HSP 1 Score: 167 bits (424), Expect = 2.730e-51
Identity = 78/122 (63.93%), Postives = 91/122 (74.59%), Query Frame = 0
Query:    1 MQAIKSKDTKPEWIVRRLLHSAGYRYRLHAAQLPGKPDIVFPSRHKVILIHGCFWHGHTCKRGARLPHSNTEYWRQKISNNRARDARTKQLLRKTGWSIHTVWECELKNQKRLLNRLRRFLN 122
            M A+K KDT+PE +VRRL HS GYRYRLH A LPGKPD+VFPSR KVI +HGCFWHGH C RG+R+P +N  YW  KI  NRARD R +Q LR+ GW + TVWECE K+   L  R+ RFLN
Sbjct:   11 MAAVKGKDTEPELVVRRLCHSLGYRYRLHRADLPGKPDLVFPSRRKVIFVHGCFWHGHDCARGSRVPKTNRTYWVAKIGRNRARDERYQQRLRELGWRVLTVWECETKSPG-LKRRIVRFLN 131          
BLAST of mRNA_P-wetherbeei_contig58101.1.1 vs. uniprot
Match: A0A1Q9AEE1_9HYPH (Very short patch repair endonuclease n=1 Tax=Rhizobium rhizosphaerae TaxID=1672749 RepID=A0A1Q9AEE1_9HYPH)

HSP 1 Score: 167 bits (424), Expect = 3.990e-51
Identity = 77/121 (63.64%), Postives = 88/121 (72.73%), Query Frame = 0
Query:    1 MQAIKSKDTKPEWIVRRLLHSAGYRYRLHAAQLPGKPDIVFPSRHKVILIHGCFWHGHTCKRGARLPHSNTEYWRQKISNNRARDARTKQLLRKTGWSIHTVWECELKNQKRLLNRLRRFL 121
            M  +KSKDT PE +VRRLLHS GYRYRLH AQLPGKPD+VF  R KV+ +HGCFWHGH CKRGAR+P +  EYW  K++ NR RD R    L + GWS+ TVWECELK    L  RLR FL
Sbjct:    1 MSQVKSKDTTPEIVVRRLLHSMGYRYRLHGAQLPGKPDLVFSGRKKVLFVHGCFWHGHDCKRGARIPATRQEYWLAKVARNRERDVRNVSSLVQAGWSVMTVWECELKAGLALEERLRSFL 121          
BLAST of mRNA_P-wetherbeei_contig58101.1.1 vs. uniprot
Match: A3UG24_9PROT (Very short patch repair endonuclease n=2 Tax=unclassified Oceanicaulis TaxID=2632123 RepID=A3UG24_9PROT)

HSP 1 Score: 166 bits (420), Expect = 1.480e-50
Identity = 73/121 (60.33%), Postives = 87/121 (71.90%), Query Frame = 0
Query:    1 MQAIKSKDTKPEWIVRRLLHSAGYRYRLHAAQLPGKPDIVFPSRHKVILIHGCFWHGHTCKRGARLPHSNTEYWRQKISNNRARDARTKQLLRKTGWSIHTVWECELKNQKRLLNRLRRFL 121
            M+A+K KDTKPE IVRRL H+ GYR+RLH   LPGKPD+VFP R KVI +HGCFWHGH C RG+R P  N EYWR KI+ N  RDA   Q L + GW    +WECE+K++  L +RLR FL
Sbjct:   19 MRAVKGKDTKPEMIVRRLAHALGYRFRLHRKDLPGKPDLVFPGRRKVIFVHGCFWHGHECARGSRQPKQNAEYWRNKIARNVERDADNLQALERLGWQTQVIWECEMKDRDALADRLRAFL 139          
BLAST of mRNA_P-wetherbeei_contig58101.1.1 vs. uniprot
Match: UPI001E3440DC (very short patch repair endonuclease n=1 Tax=Rhizobium TaxID=379 RepID=UPI001E3440DC)

HSP 1 Score: 164 bits (415), Expect = 5.300e-50
Identity = 74/125 (59.20%), Postives = 92/125 (73.60%), Query Frame = 0
Query:    1 MQAIKSKDTKPEWIVRRLLHSAGYRYRLHAAQLPGKPDIVFPSRHKVILIHGCFWHGHTCKRGARLPHSNTEYWRQKISNNRARDARTKQLLRKTGWSIHTVWECELK--NQKRLLNRLRRFLNK 123
            M+A+KSKDT PE IVRRL+HS G+RYRLH   LPGKPD++FP+R KVI +HGCFWHGH C RGAR P SN +YW  KI+ N  RD R  + L+K GW + TVWEC+ K  +++ L  RL  FLN+
Sbjct:    1 MRAVKSKDTAPEMIVRRLVHSLGFRYRLHRKDLPGKPDLIFPARRKVIFVHGCFWHGHDCSRGARKPKSNADYWHAKIARNVERDGRNNEALQKAGWDVMTVWECDTKVADREGLAVRLDAFLNR 125          
BLAST of mRNA_P-wetherbeei_contig58101.1.1 vs. uniprot
Match: UPI001378CB9F (very short patch repair endonuclease n=1 Tax=Microvirga arsenatis TaxID=2692265 RepID=UPI001378CB9F)

HSP 1 Score: 164 bits (415), Expect = 8.240e-50
Identity = 72/123 (58.54%), Postives = 93/123 (75.61%), Query Frame = 0
Query:    1 MQAIKSKDTKPEWIVRRLLHSAGYRYRLHAAQLPGKPDIVFPSRHKVILIHGCFWHGHTCKRGARLPHSNTEYWRQKISNNRARDARTKQLLRKTGWSIHTVWECE--LKNQKRLLNRLRRFL 121
            M+A+KSKDT PE +VR+L+H  GYRYRLHA  LPGKPD+VFP R KVIL++GCFWHGH CKRGAR P +N EYWR K+  NR RD R ++ LR+ GW + T+WEC+  +  Q+ L + + +FL
Sbjct:    7 MRAVKSKDTTPELVVRQLVHGMGYRYRLHAKDLPGKPDLVFPQRRKVILVNGCFWHGHHCKRGARQPKANAEYWRAKVQKNRDRDRRNEKALREAGWEVLTIWECQTAVSQQEELRSAIAQFL 129          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig58101.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E1ED04_9HYPH5.510e-5566.94Very short patch repair endonuclease n=1 Tax=Parvi... [more]
UPI001C31CA881.940e-5260.66DNA mismatch endonuclease Vsr n=1 Tax=Sphingobium ... [more]
UPI0015DA33CC3.550e-5260.66DNA mismatch endonuclease Vsr n=1 Tax=Agrobacteriu... [more]
A0A2D4VGN9_9HYPH7.410e-5261.48Very short patch repair endonuclease n=1 Tax=Parvi... [more]
UPI0004AE70F91.490e-5161.16DNA mismatch endonuclease Vsr n=1 Tax=Methylopila ... [more]
A0A2W4QV52_9PROT2.730e-5163.93Very short patch repair endonuclease n=1 Tax=Prote... [more]
A0A1Q9AEE1_9HYPH3.990e-5163.64Very short patch repair endonuclease n=1 Tax=Rhizo... [more]
A3UG24_9PROT1.480e-5060.33Very short patch repair endonuclease n=2 Tax=uncla... [more]
UPI001E3440DC5.300e-5059.20very short patch repair endonuclease n=1 Tax=Rhizo... [more]
UPI001378CB9F8.240e-5058.54very short patch repair endonuclease n=1 Tax=Micro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.960.10VSR Endonucleasecoord: 8..128
e-value: 4.8E-46
score: 157.7
IPR004603DNA mismatch endonuclease VSRPIRSFPIRSF018267VSR_endonuccoord: 1..129
e-value: 4.0E-50
score: 167.0
IPR004603DNA mismatch endonuclease VSRPFAMPF03852Vsrcoord: 1..62
e-value: 3.5E-27
score: 94.0
IPR004603DNA mismatch endonuclease VSRTIGRFAMTIGR00632TIGR00632coord: 1..106
e-value: 1.0E-41
score: 139.9
IPR004603DNA mismatch endonuclease VSRCDDcd00221Vsrcoord: 1..107
e-value: 7.11881E-43
score: 135.198
IPR011335Restriction endonuclease type II-likeSUPERFAMILY52980Restriction endonuclease-likecoord: 1..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig58101contigP-wetherbeei_contig58101:101..490 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig58101.1.1mRNA_P-wetherbeei_contig58101.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig58101 101..505 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig58101.1.1 ID=prot_P-wetherbeei_contig58101.1.1|Name=mRNA_P-wetherbeei_contig58101.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=130bp
MQAIKSKDTKPEWIVRRLLHSAGYRYRLHAAQLPGKPDIVFPSRHKVILI
HGCFWHGHTCKRGARLPHSNTEYWRQKISNNRARDARTKQLLRKTGWSIH
TVWECELKNQKRLLNRLRRFLNKVPHAKS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004603DNA_mismatch_endonuc_vsr
IPR011335Restrct_endonuc-II-like