prot_P-wetherbeei_contig57813.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig57813.1.1
Unique Nameprot_P-wetherbeei_contig57813.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length159
Homology
BLAST of mRNA_P-wetherbeei_contig57813.1.1 vs. uniprot
Match: A0A7Z9PUH2_9BACT (Tetratricopeptide repeat protein (Fragment) n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9PUH2_9BACT)

HSP 1 Score: 58.5 bits (140), Expect = 1.160e-7
Identity = 24/63 (38.10%), Postives = 39/63 (61.90%), Query Frame = 0
Query:    2 SRQGLIRGTQRMWDQYEITEQDSVFKFYHIGIAQLVLGKTQACIDSMSKVLNMNPNFEKALYY 64
            +R   IR     W  Y+   ++++FK+Y++G+A ++LG       +  KV++MNPNFEK LYY
Sbjct:  115 TRYQAIREAAASWKDYKEKREENIFKYYNLGVAAMILGGFDDARKAFEKVVSMNPNFEKCLYY 177          
BLAST of mRNA_P-wetherbeei_contig57813.1.1 vs. uniprot
Match: A0A7X7UKS9_9BACT (Tetratricopeptide repeat protein n=1 Tax=Bacteroidales bacterium TaxID=2030927 RepID=A0A7X7UKS9_9BACT)

HSP 1 Score: 53.1 bits (126), Expect = 2.950e-5
Identity = 40/128 (31.25%), Postives = 61/128 (47.66%), Query Frame = 0
Query:   31 IGIAQLVLGKTQACIDSMSKVLNMNPNFEKALYYRSRSYRMLGMLREAGRDLQKHLELRPRDPYANYALGICLMEVGRTPQAIACFNKALNDKPGYFKAHLQVAQAYLTLTQYEQAHESLKKALQISP 158
            +G A L LG+     ++ +K L + P F  AL   +R Y +L    +      K +  +P +P A Y      ME G T  A+  + KA+  KP YF AH+Q+   Y    Q + A    K AL+++P
Sbjct:   93 LGDAYLNLGQPVLAENAYAKALKLQPTFNDALIGMARYYLVLKNHDQTLALTAKAIINQPFNPSAYYLAAWSFMEKGDTLSALKNYLKAIEQKPDYFDAHVQLGILY-GKKQPQMAEAFFKNALRLNP 219          
BLAST of mRNA_P-wetherbeei_contig57813.1.1 vs. uniprot
Match: A0A7Y3R8V6_9FLAO (Tetratricopeptide repeat protein n=2 Tax=unclassified Flavobacterium TaxID=196869 RepID=A0A7Y3R8V6_9FLAO)

HSP 1 Score: 51.6 bits (122), Expect = 8.810e-5
Identity = 43/170 (25.29%), Postives = 75/170 (44.12%), Query Frame = 0
Query:    1 YSRQGLIRGTQRMWDQYEITEQDSVFKFYHIGIAQLVLGKTQACID---------SMSKVLNMNPNFEKALYYRSRSYRMLGMLREAGRDLQKHLELRPRDPYANYALGICLMEVGRTPQAIACFNKALNDKPGYFKAHLQV---AQAYLTLTQYEQAHESLKKALQISP 158
            YS +G +    R   Q+E+   D    +      Q++  +    +D           + ++N+ P F    + R+ SY M    +EA RD++K LEL P+D  +   L     ++    +A+A + + L D P     H+     A  Y  L Q+++A   + KAL+I P
Sbjct:   58 YSNRGHVY---RQQGQFELAVSDYTQSYALYPNIQVLYARANTYMDMEQYEKAQADYTAIINLEPTFSDIYFDRAYSYIMQKKYQEAMRDMEKQLELTPKDFKSLANLINLKKQLDLKEEALADYKRLLKDFPDAEDLHIVYNNRANLYSDLKQFDKALADINKALEIKP 224          
BLAST of mRNA_P-wetherbeei_contig57813.1.1 vs. uniprot
Match: A0A1Q8BG86_9CREN (Uncharacterized protein n=1 Tax=Crenarchaeota archaeon 13_1_20CM_2_51_8 TaxID=1805093 RepID=A0A1Q8BG86_9CREN)

HSP 1 Score: 51.6 bits (122), Expect = 9.530e-5
Identity = 33/106 (31.13%), Postives = 54/106 (50.94%), Query Frame = 0
Query:   48 MSKVLNMNPNFEKALYYRSRSYRMLGMLREAGRDLQKHLELRPRDPYANYALGICLMEVGRTPQAIACFNKALNDKPGYFKAHLQVAQAYLTLTQYEQAHESLKKA 153
            + +V+ + PN+  A ++ S     +G   EA    ++ LEL P        +GI L+ +GRT +AIA F K L   PG+   ++  A A   +  ++QA E  +KA
Sbjct:  151 LKRVIALKPNYATAYHWYSNVLGGMGRYEEAVEFEKRALELDPYSSIFGQGIGIHLLLMGRTREAIAQFEKTLEIDPGFASVYIWKAWANERVGNFDQAIEDAEKA 256          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57813.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A7Z9PUH2_9BACT1.160e-738.10Tetratricopeptide repeat protein (Fragment) n=1 Ta... [more]
A0A7X7UKS9_9BACT2.950e-531.25Tetratricopeptide repeat protein n=1 Tax=Bacteroid... [more]
A0A7Y3R8V6_9FLAO8.810e-525.29Tetratricopeptide repeat protein n=2 Tax=unclassif... [more]
A0A1Q8BG86_9CREN9.530e-531.13Uncharacterized protein n=1 Tax=Crenarchaeota arch... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 127..159
e-value: 83.0
score: 6.9
coord: 25..58
e-value: 14.0
score: 13.7
coord: 93..126
e-value: 0.75
score: 18.8
coord: 59..92
e-value: 13.0
score: 14.1
IPR019734Tetratricopeptide repeatPFAMPF13181TPR_8coord: 128..159
e-value: 1.2E-4
score: 22.0
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 93..126
score: 8.6144
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 127..159
score: 8.0244
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 94..159
e-value: 1.3E-17
score: 65.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 10..93
e-value: 1.8E-12
score: 49.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 22..158
NoneNo IPR availablePFAMPF14559TPR_19coord: 73..125
e-value: 7.5E-6
score: 26.3
NoneNo IPR availablePANTHERPTHR44943CELLULOSE SYNTHASE OPERON PROTEIN Ccoord: 28..159
NoneNo IPR availablePROSITEPS50293TPR_REGIONcoord: 127..159
score: 11.786971

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig57813contigP-wetherbeei_contig57813:17..493 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig57813.1.1mRNA_P-wetherbeei_contig57813.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig57813 17..493 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig57813.1.1 ID=prot_P-wetherbeei_contig57813.1.1|Name=mRNA_P-wetherbeei_contig57813.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=159bp
YSRQGLIRGTQRMWDQYEITEQDSVFKFYHIGIAQLVLGKTQACIDSMSK
VLNMNPNFEKALYYRSRSYRMLGMLREAGRDLQKHLELRPRDPYANYALG
ICLMEVGRTPQAIACFNKALNDKPGYFKAHLQVAQAYLTLTQYEQAHESL
KKALQISPQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf