prot_P-wetherbeei_contig57724.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig57724.1.1
Unique Nameprot_P-wetherbeei_contig57724.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length111
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig57724.1.1 vs. uniprot
Match: UPI0019AC71D9 (Cytochrome c n=1 Tax=Prolixibacteraceae bacterium TaxID=2053594 RepID=UPI0019AC71D9)

HSP 1 Score: 159 bits (401), Expect = 2.120e-48
Identity = 74/110 (67.27%), Postives = 87/110 (79.09%), Query Frame = 0 
Query:    1 MNKLWIAIVAVAGVXXXXXXXXXXXXXKGKEKSALCASCHGPDGNTPIMPEYPRLAGQPHDYLEKALRDYKSGKRKNPLMAPMAQTLSKEDIKDLAAYYSSLSGDLKVKY 110
            MN  WIA+VA AG+             KGKEK+A+C++CHG DGNTP+ P+YP++A QP D+LEKALRDYKSGKRKNPLM P AQ LSK+D+KDLAAYYSSLSGDLKVKY
Sbjct:    1 MNTFWIALVAAAGLAATGTAVAGGDAAKGKEKAAVCSACHGADGNTPLTPDYPKIASQPADFLEKALRDYKSGKRKNPLMGPQAQNLSKQDMKDLAAYYSSLSGDLKVKY 110
[Close]
BLAST of mRNA_P-wetherbeei_contig57724.1.1 vs. uniprot
Match: A0A3N5EXG8_9BURK (Cytochrome c n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A3N5EXG8_9BURK)

HSP 1 Score: 107 bits (267), Expect = 5.410e-28
Identity = 51/82 (62.20%), Postives = 66/82 (80.49%), Query Frame = 0 
Query:   29 GKEKS-ALCASCHGPDGNTPIMPEYPRLAGQPHDYLEKALRDYKSGKRKNPLMAPMAQTLSKEDIKDLAAYYSSLSGDLKVK 109
            GK K+ ++CA+CHG DGNTPI P YP+LAGQ  D+LE+AL DYKSG RKN +MA  +Q LS+ DI++LAAYY+SL G L++K
Sbjct:   29 GKAKAESVCAACHGKDGNTPIDPSYPKLAGQYRDFLERALLDYKSGARKNAIMAGQSQALSRADIENLAAYYASLPGSLRIK 110
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BLAST of mRNA_P-wetherbeei_contig57724.1.1 vs. uniprot
Match: A0A536SNL1_9PROT (Cytochrome c n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536SNL1_9PROT)

HSP 1 Score: 106 bits (265), Expect = 9.700e-28
Identity = 49/80 (61.25%), Postives = 61/80 (76.25%), Query Frame = 0 
Query:   29 GKEKSALCASCHGPDGNTPIMPEYPRLAGQPHDYLEKALRDYKSGKRKNPLMAPMAQTLSKEDIKDLAAYYSSLSGDLKV 108
            GK+KS  CA+CHGPDGN+P  P++PRLAGQ +DYL KALRDY+SG RKNP+MA     L+ +D+ DLAA+YS   G L V
Sbjct:   26 GKQKSQACAACHGPDGNSPTGPDFPRLAGQHYDYLLKALRDYRSGARKNPIMAAQVGNLNPQDMADLAAFYSGQKGVLHV 105
[Close]
BLAST of mRNA_P-wetherbeei_contig57724.1.1 vs. uniprot
Match: A0A8I1R8L2_9BURK (Cytochrome c n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A8I1R8L2_9BURK)

HSP 1 Score: 105 bits (263), Expect = 2.600e-27
Identity = 51/82 (62.20%), Postives = 65/82 (79.27%), Query Frame = 0 
Query:   29 GKEKSA-LCASCHGPDGNTPIMPEYPRLAGQPHDYLEKALRDYKSGKRKNPLMAPMAQTLSKEDIKDLAAYYSSLSGDLKVK 109
            G EK+A +CA+CHG DGNTPI P YP+LAGQ  DYLE+AL DY+SG RKNP+M   A+ LS+ DI++LAAYY+SL G+L  +
Sbjct:   35 GAEKAAQVCAACHGKDGNTPIDPTYPKLAGQHADYLERALLDYQSGHRKNPIMGAQAKQLSRADIRNLAAYYASLPGNLSSR 116
[Close]
BLAST of mRNA_P-wetherbeei_contig57724.1.1 vs. uniprot
Match: A0A536XVU4_9PROT (Cytochrome c n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536XVU4_9PROT)

HSP 1 Score: 105 bits (262), Expect = 2.690e-27
Identity = 49/80 (61.25%), Postives = 59/80 (73.75%), Query Frame = 0 
Query:   29 GKEKSALCASCHGPDGNTPIMPEYPRLAGQPHDYLEKALRDYKSGKRKNPLMAPMAQTLSKEDIKDLAAYYSSLSGDLKV 108
            GK KS  CA+CHGPDGN+P  P++PRLAGQ +DYL KALRDYKSG RKNP+M      L+ +D+ DLAA+YS   G L V
Sbjct:   25 GKPKSQACAACHGPDGNSPTSPDFPRLAGQHYDYLLKALRDYKSGARKNPIMGAQVGGLNPQDMADLAAFYSRQRGSLHV 104
[Close]
BLAST of mRNA_P-wetherbeei_contig57724.1.1 vs. uniprot
Match: UPI00197D7786 (cytochrome c n=1 Tax=Niveibacterium TaxID=1769726 RepID=UPI00197D7786)

HSP 1 Score: 104 bits (260), Expect = 5.270e-27
Identity = 50/82 (60.98%), Postives = 64/82 (78.05%), Query Frame = 0 
Query:   28 KGKEKSALCASCHGPDGNTPIMPEYPRLAGQPHDYLEKALRDYKSGKRKNPLMAPMAQTLSKEDIKDLAAYYSSLSGDLKVK 109
            KGKEKS +CA+CHG DGN+   P++P+LAGQ  DY+ +AL DYK+GKRKNP+M  MA  LSKED+ DLAAY+S+  G + VK
Sbjct:   24 KGKEKSTVCAACHGADGNS-ASPDFPKLAGQHEDYIVRALTDYKAGKRKNPIMMGMAAPLSKEDVADLAAYFSAQKGLVIVK 104
[Close]
BLAST of mRNA_P-wetherbeei_contig57724.1.1 vs. uniprot
Match: A0A536TY35_9PROT (Cytochrome c n=4 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536TY35_9PROT)

HSP 1 Score: 103 bits (258), Expect = 1.090e-26
Identity = 49/80 (61.25%), Postives = 59/80 (73.75%), Query Frame = 0 
Query:   29 GKEKSALCASCHGPDGNTPIMPEYPRLAGQPHDYLEKALRDYKSGKRKNPLMAPMAQTLSKEDIKDLAAYYSSLSGDLKV 108
            GK KS  CA+CHGPDGN+P  P++PRLAGQ +DYL KALRDYKSG RKNP+M      L+ +D+ DLAA+YS   G L V
Sbjct:   25 GKLKSQTCAACHGPDGNSPAGPDFPRLAGQYYDYLLKALRDYKSGARKNPIMGGQVGGLNSQDMADLAAFYSRQKGSLHV 104
[Close]
BLAST of mRNA_P-wetherbeei_contig57724.1.1 vs. uniprot
Match: A0A5C7EYP6_9PROT (Cytochrome c n=1 Tax=Pelomicrobium methylotrophicum TaxID=2602750 RepID=A0A5C7EYP6_9PROT)

HSP 1 Score: 103 bits (256), Expect = 2.530e-26
Identity = 51/109 (46.79%), Postives = 69/109 (63.30%), Query Frame = 0 
Query:    1 MNKLWIAIVAVAGVXXXXXXXXXXXXXKGKEKSALCASCHGPDGNTPIMPEYPRLAGQPHDYLEKALRDYKSGKRKNPLMAPMAQTLSKEDIKDLAAYYSSLSGDLKVK 109
            M K+W   VA+ G+               K  + +CA+CHGP G+ P+ P+YPRLAGQ  DYL KAL DYK+G R+NP+M   A  LS+ DI++LAAY++S  G L+VK
Sbjct:    1 MKKIW--AVALVGLLGAVQACAADPEAGKKIATEVCAACHGPTGDAPMTPQYPRLAGQHRDYLAKALTDYKTGARQNPIMQGFAANLSERDIENLAAYFASQKGSLRVK 107
[Close]
BLAST of mRNA_P-wetherbeei_contig57724.1.1 vs. uniprot
Match: A0A840BN88_9RHOO (Cytochrome c553 n=1 Tax=Niveibacterium umoris TaxID=1193620 RepID=A0A840BN88_9RHOO)

HSP 1 Score: 102 bits (255), Expect = 3.390e-26
Identity = 47/77 (61.04%), Postives = 62/77 (80.52%), Query Frame = 0 
Query:   28 KGKEKSALCASCHGPDGNTPIMPEYPRLAGQPHDYLEKALRDYKSGKRKNPLMAPMAQTLSKEDIKDLAAYYSSLSG 104
            KGKEKSA+CA+CHG DGN+   P++P+LAGQ  DY+ +AL DYK+GKRKNP+M  MA  L+KED+ D+AAY+S+  G
Sbjct:   28 KGKEKSAMCAACHGADGNS-ASPDFPKLAGQHEDYIVRALTDYKAGKRKNPIMMGMAAPLTKEDVADVAAYFSAQKG 103
[Close]
BLAST of mRNA_P-wetherbeei_contig57724.1.1 vs. uniprot
Match: A0A1F4E4E4_9PROT (Cytochrome C n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 TaxID=1797497 RepID=A0A1F4E4E4_9PROT)

HSP 1 Score: 102 bits (254), Expect = 4.420e-26
Identity = 52/82 (63.41%), Postives = 60/82 (73.17%), Query Frame = 0 
Query:   29 GKEKSALCASCHGPDGNTPIMPEYPRLAGQPHDYLEKALRDYKSGKRKNPLMAPMAQTLSKEDIKDLAAYYSSLSGDLKVKY 110
            GKEKS  CA+CHGPDGN+   P++P+LAGQ  DYL K L DYKSG RKN +MAP   +LSK DI DLAA+YS   G L VKY
Sbjct:   27 GKEKSKTCAACHGPDGNSQA-PDFPKLAGQHEDYLVKTLNDYKSGARKNAIMAPQTASLSKRDIADLAAFYSQQKG-LVVKY 106
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57724.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0019AC71D92.120e-4867.27Cytochrome c n=1 Tax=Prolixibacteraceae bacterium ... [more]
A0A3N5EXG8_9BURK5.410e-2862.20Cytochrome c n=1 Tax=Burkholderiales bacterium Tax... [more]
A0A536SNL1_9PROT9.700e-2861.25Cytochrome c n=1 Tax=Betaproteobacteria bacterium ... [more]
A0A8I1R8L2_9BURK2.600e-2762.20Cytochrome c n=1 Tax=Burkholderiales bacterium Tax... [more]
A0A536XVU4_9PROT2.690e-2761.25Cytochrome c n=1 Tax=Betaproteobacteria bacterium ... [more]
UPI00197D77865.270e-2760.98cytochrome c n=1 Tax=Niveibacterium TaxID=1769726 ... [more]
A0A536TY35_9PROT1.090e-2661.25Cytochrome c n=4 Tax=Betaproteobacteria bacterium ... [more]
A0A5C7EYP6_9PROT2.530e-2646.79Cytochrome c n=1 Tax=Pelomicrobium methylotrophicu... [more]
A0A840BN88_9RHOO3.390e-2661.04Cytochrome c553 n=1 Tax=Niveibacterium umoris TaxI... [more]
A0A1F4E4E4_9PROT4.420e-2663.41Cytochrome C n=1 Tax=Betaproteobacteria bacterium ... [more]

Pages

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009056Cytochrome c-like domainPFAMPF13442Cytochrome_CBB3coord: 34..98
e-value: 7.3E-9
score: 35.8
IPR009056Cytochrome c-like domainPROSITEPS51007CYTCcoord: 18..103
score: 10.607313
IPR036909Cytochrome c-like domain superfamilyGENE3D1.10.760.10coord: 24..102
e-value: 3.2E-29
score: 103.1
IPR036909Cytochrome c-like domain superfamilySUPERFAMILY46626Cytochrome ccoord: 4..104
NoneNo IPR availablePIRSRPIRSR000005-1PIRSR000005-1coord: 27..102
e-value: 1.9E-26
score: 90.9
NoneNo IPR availablePIRSRPIRSR000005-2PIRSR000005-2coord: 27..102
e-value: 1.9E-26
score: 90.9
NoneNo IPR availablePIRSRPIRSR000006-2PIRSR000006-2coord: 22..46
e-value: 0.042
score: 11.1
NoneNo IPR availablePANTHERPTHR33751CBB3-TYPE CYTOCHROME C OXIDASE SUBUNIT FIXPcoord: 6..103
NoneNo IPR availablePANTHERPTHR33751:SF9CYTOCHROME BC1 COMPLEX CYTOCHROME C SUBUNITcoord: 6..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig57724contigP-wetherbeei_contig57724:26..358 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig57724.1.1mRNA_P-wetherbeei_contig57724.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig57724 26..358 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig57724.1.1 ID=prot_P-wetherbeei_contig57724.1.1|Name=mRNA_P-wetherbeei_contig57724.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=111bp
MNKLWIAIVAVAGVVVAGNAVAGGNVAKGKEKSALCASCHGPDGNTPIMP
EYPRLAGQPHDYLEKALRDYKSGKRKNPLMAPMAQTLSKEDIKDLAAYYS
SLSGDLKVKY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009056Cyt_c-like_dom
IPR036909Cyt_c-like_dom_sf