prot_P-wetherbeei_contig5749.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig5749.1.1
Unique Nameprot_P-wetherbeei_contig5749.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length370
Homology
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BLAST of mRNA_P-wetherbeei_contig5749.1.1 vs. uniprot
Match: A0A835YRB3_9STRA (AEX-3 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRB3_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 7.650e-16
Identity = 82/222 (36.94%), Postives = 102/222 (45.95%), Query Frame = 0 
Query:   11 VRADLSSVVLVNLSADAVVMPIRP---VGYVEIDSGGSGGR-NSNGXXXXXXXXXXXXHGGEDVFGQLEELPHDLVAATAAAIERAVPADMAPLPFRGAAVRR------AAAAAVPGAAPPR---RAQELCAPAVRVAVVDMMVELVGGYQTLRYVEGARARFITLSP----QKHRPFLTAMLSTQIWQLFREQCIGAGGGSXXXHHSREAQVQLFTECVEY 215
            V A LS+ V+VNL  D+VV+PI      G +E+            G              G   +G L E+P +L    A   ER +                      +   AVP AA      R +   APAVRVA VD+MV LVG  QTLRY +GA+ R I  +P    Q HR  L A+LS Q+WQLFRE C+            REAQVQLF ECVE+
Sbjct:  523 VTATLSAFVVVNLGKDSVVLPISSGLQSGRLEVRGDAPTEELQDGGPHVSAARAKATGLAGRAAYG-LAEMPRELALVAAHRTERCMXXXXXXXXXXXXXXXXXXXXXPSGRHAVPSAAAVHGTPRTRVFYAPAVRVAAVDLMVSLVGHCQTLRYADGAKERMIADAPEAHRQAHRQMLAALLSGQLWQLFREDCLEEDLPGRLPE--REAQVQLFCECVEH 741
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BLAST of mRNA_P-wetherbeei_contig5749.1.1 vs. uniprot
Match: D7FSS9_ECTSI (UDENN domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSS9_ECTSI)

HSP 1 Score: 85.9 bits (211), Expect = 1.850e-14
Identity = 71/221 (32.13%), Postives = 95/221 (42.99%), Query Frame = 0 
Query:   74 LEELPHDLVAATAAAIERAVPADMAPLPFRGAAVRRAAAAAVPGAAPPRRAQELCAPAVRVAVVDMMVELVGGYQTLRYVEGARARFITLSPQKHRPFLTAMLSTQIWQLFREQCIGAGGGSXXXHHSREAQVQLFTECVEYSRIAGCAISAAGAGVDLVHESSNGSXXXXXXXXXXXXXSSEMDARADCLPGVGSRRGSAGVSVSCSSVLYPSEDVAEVL 294
            L ELP  L +     + R VP +++P+  R     RA+    PG              +RVAVVD+MV+L G YQT RYV G++ R I  +P+ HR  L A+ STQ+W++F +  +    G+   +   E Q QLF  CVE +R  G        GV                                         G +G S SC  VLYPSEDV E L
Sbjct:  583 LAELPRALKSRAENRMRRCVPLEVSPVTDRSHHQPRASTLYTPG--------------LRVAVVDVMVDLFGDYQTYRYVPGSQKRMIGEAPEDHRKLLEAVYSTQLWRIFSDDLLAEEAGANGENW--EEQAQLFCACVERARHQG--------GVS----------------------------------------GPSGDSHSCQDVLYPSEDVEEQL 739
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5749.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835YRB3_9STRA7.650e-1636.94AEX-3 domain-containing protein n=1 Tax=Tribonema ... [more]
D7FSS9_ECTSI1.850e-1432.13UDENN domain-containing protein n=2 Tax=Ectocarpus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..70
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 310..369
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 243..264

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5749contigP-wetherbeei_contig5749:128..1526 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5749.1.1mRNA_P-wetherbeei_contig5749.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig5749 2..2742 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig5749.1.1 ID=prot_P-wetherbeei_contig5749.1.1|Name=mRNA_P-wetherbeei_contig5749.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=370bp
MGIPIGDLPAVRADLSSVVLVNLSADAVVMPIRPVGYVEIDSGGSGGRNS
NGGGRNSGGGGGGSHGGEDVFGQLEELPHDLVAATAAAIERAVPADMAPL
PFRGAAVRRAAAAAVPGAAPPRRAQELCAPAVRVAVVDMMVELVGGYQTL
RYVEGARARFITLSPQKHRPFLTAMLSTQIWQLFREQCIGAGGGSGHGHH
SREAQVQLFTECVEYSRIAGCAISAAGAGVDLVHESSNGSGGGGYGSGGS
GGGSSEMDARADCLPGVGSRRGSAGVSVSCSSVLYPSEDVAEVLESRRCR
HRCRRRCRKQKGPQRPRQQPIQSARRPEQRWRRRWQRGGGKPPHVFVDAV
GGTWPVPEPQSTPCRRCGA*
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