prot_P-wetherbeei_contig57384.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig57384.1.1
Unique Nameprot_P-wetherbeei_contig57384.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length128
Homology
BLAST of mRNA_P-wetherbeei_contig57384.1.1 vs. uniprot
Match: A0A3N5GU27_9HYPH (Protein translocase subunit SecDF (Fragment) n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A3N5GU27_9HYPH)

HSP 1 Score: 130 bits (327), Expect = 1.300e-36
Identity = 69/128 (53.91%), Postives = 95/128 (74.22%), Query Frame = 0
Query:    1 MLHFSRFQMIAILASVLIGLIFALPNALPAPWQEAMLRTIGAKSMTLGLDLQGGSNVVMEVDGKDLRDQLMLQLSSDIRSSLREAKIGYKGITRTENGVSVRLSDIADAARAKTELQKLQQPLTGGLM 128
            MLHF R++ ++I+A++L+ LI  +PN L    Q+ +L+  G + +TLGLDLQGGSNV++EV+ KDLRD+L  QL  DIRS+LREAKIGY GI   +NGVSVR++   D  RA+T+L  LQQPL  G++
Sbjct:    1 MLHFPRWKTLSIIATLLVSLILIVPNFLSKEQQD-VLKGYGLRPVTLGLDLQGGSNVLLEVEQKDLRDKLSQQLVGDIRSTLREAKIGYSGIRSNDNGVSVRITKPEDLERARTQLATLQQPLETGML 127          
BLAST of mRNA_P-wetherbeei_contig57384.1.1 vs. uniprot
Match: UPI00198451B5 (Protein translocase subunit SecD n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=UPI00198451B5)

HSP 1 Score: 132 bits (331), Expect = 1.300e-33
Identity = 70/130 (53.85%), Postives = 94/130 (72.31%), Query Frame = 0
Query:    1 MLHFSRFQMIAILASVLIGLIFALPNALPAPWQEAMLR---TIGAKSMTLGLDLQGGSNVVMEVDGKDLRDQLMLQLSSDIRSSLREAKIGYKGITRTENGVSVRLSDIADAARAKTELQKLQQPLTGGL 127
            ML F+R++ +AI+ SVL+ LI ALPN LP  W  A+     T   + MTLGLDLQGGSNV++EVD  D+ ++L  Q++ DIR +LREA+IGY GI R+ NGV+VR+++ AD ARA+ EL KL QP+  GL
Sbjct:    1 MLRFTRWKALAIIGSVLLALITALPNILPTAWNSALAGFPFTSALRPMTLGLDLQGGSNVLLEVDRNDIMNRLAQQITGDIRGALREARIGYSGINRSANGVTVRITNPADLARAREELGKLLQPVDPGL 130          
BLAST of mRNA_P-wetherbeei_contig57384.1.1 vs. uniprot
Match: UPI0018C62290 (protein translocase subunit SecD n=1 Tax=Aestuariivirga litoralis TaxID=2650924 RepID=UPI0018C62290)

HSP 1 Score: 130 bits (326), Expect = 7.830e-33
Identity = 68/129 (52.71%), Postives = 93/129 (72.09%), Query Frame = 0
Query:    1 MLHFSRFQMIAILASVLIGLIFALPNAL-PAPWQEAMLRTIGAKSMTLGLDLQGGSNVVMEVDGKDLRDQLMLQLSSDIRSSLREAKIGYKGITRTENGVSVRLSDIADAARAKTELQKLQQPLTGGLM 128
            M H+SR++++ IL +VL+G++ ALPNAL P  +   M R  G K MTLGLDLQGGSN++MEVD KDL D+L  QL  DIR SLRE K+GY G+ +T+NGV+V ++   D  +A TEL+KL  P+  G++
Sbjct:    1 MFHYSRWRVLLILGTVLLGIVLALPNALDPLGYSNVMTR-FGLKPMTLGLDLQGGSNILMEVDQKDLTDKLQQQLMGDIRLSLREQKVGYSGLGKTDNGVTVTVNKPEDTDKASTELKKLLNPVDSGVL 128          
BLAST of mRNA_P-wetherbeei_contig57384.1.1 vs. uniprot
Match: A0A2W2AL25_9HYPH (Protein translocase subunit SecD n=1 Tax=Aestuariivirga litoralis TaxID=2650924 RepID=A0A2W2AL25_9HYPH)

HSP 1 Score: 129 bits (325), Expect = 8.930e-33
Identity = 68/126 (53.97%), Postives = 91/126 (72.22%), Query Frame = 0
Query:    1 MLHFSRFQMIAILASVLIGLIFALPNALPAPWQEAMLRTIGAKSMTLGLDLQGGSNVVMEVDGKDLRDQLMLQLSSDIRSSLREAKIGYKGITRTENGVSVRLSDIADAARAKTELQKLQQPLTGG 126
            MLHFS+++   IL +VL+ ++ ALPN LPA +Q+ MLR  G + MTLGLDLQGG N+++E+D  DL+ ++  QL  DIRSSLREAKIGY GI R  +GV VR++   D  RA T+L+KL QP+  G
Sbjct:    1 MLHFSKWKQFGILFAVLLSIVVALPNVLPAKYQD-MLRPYGLRPMTLGLDLQGGVNILLEIDRDDLKKRMTEQLVGDIRSSLREAKIGYNGINRGPDGVRVRITKPEDVDRAVTDLRKLAQPVDAG 125          
BLAST of mRNA_P-wetherbeei_contig57384.1.1 vs. uniprot
Match: A0A6G6X1T4_9HYPH (Protein translocase subunit SecD n=1 Tax=Nordella sp. HKS 07 TaxID=2712222 RepID=A0A6G6X1T4_9HYPH)

HSP 1 Score: 122 bits (305), Expect = 5.890e-30
Identity = 65/127 (51.18%), Postives = 95/127 (74.80%), Query Frame = 0
Query:    1 MLHFSRFQMIAILASVLIGLIFALPNALPAPWQEAMLRTIGAKSMTLGLDLQGGSNVVMEVDGKDLRDQLMLQLSSDIRSSLREAKIGYKGITRTENGVSVRLSDIADAARAKTELQKLQQPLTGGL 127
            ML+FSR+++IAILAS+L G+IFALPN LP   Q+ +      + +TLGLDLQGGSNV+MEVD K+L + L++Q   D+R++LREA+IGYK + RT +GV+V++++  DA +A   L+ L QP+  G+
Sbjct:    1 MLNFSRWKIIAILASILAGIIFALPNVLPKDMQDKLREHTILRPITLGLDLQGGSNVLMEVDRKELTNTLIVQQMGDVRAALREARIGYK-LNRTPSGVTVQINNADDADKAYGVLRNLTQPIDTGM 126          
BLAST of mRNA_P-wetherbeei_contig57384.1.1 vs. uniprot
Match: UPI00190641BA (protein translocase subunit SecD n=1 Tax=Aestuariivirga sp. YIM B02566 TaxID=2800327 RepID=UPI00190641BA)

HSP 1 Score: 120 bits (301), Expect = 2.230e-29
Identity = 64/127 (50.39%), Postives = 92/127 (72.44%), Query Frame = 0
Query:    1 MLHFSRFQMIAILASVLIGLIFALPNALPAPWQEAMLRTIGAKSMTLGLDLQGGSNVVMEVDGKDLRDQLMLQLSSDIRSSLREAKIGYKGITRTENGVSVRLSDIADAARAKTELQKLQQPLTGGL 127
            ML+FSR++++AILAS+++G+ FALPN L    Q+ +      + +TLGLDLQGGSNV+MEVD K+L + L++Q   D+R+ LREA+IGYK + RT  GV+V+++D AD  +A   L+ L QPL  GL
Sbjct:    1 MLYFSRWKVLAILASIVVGIAFALPNVLTKDMQDKLREYTILRPLTLGLDLQGGSNVLMEVDRKELINTLIVQQMGDVRAVLREARIGYK-LNRTPTGVAVQITDAADTDKANQVLRNLTQPLDTGL 126          
BLAST of mRNA_P-wetherbeei_contig57384.1.1 vs. uniprot
Match: UPI001185EB0D (protein translocase subunit SecD n=1 Tax=Rhodoligotrophos appendicifer TaxID=987056 RepID=UPI001185EB0D)

HSP 1 Score: 115 bits (289), Expect = 1.030e-27
Identity = 62/126 (49.21%), Postives = 89/126 (70.63%), Query Frame = 0
Query:    2 LHFSRFQMIAILASVLIGLIFALPNALPAPWQEAMLRTIGAKSMTLGLDLQGGSNVVMEVDGKDLRDQLMLQLSSDIRSSLREAKIGYKGITRTENGVSVRLSDIADAARAKTELQKLQQPLTGGL 127
            ++F+R+++IAI A +L+G+I ALPN LPA  +E M   + +K+M LGLDLQGGS V++EVD  DL  QL  QL  DIR  LR+ +IGY G+ R+   VS+R+ + AD  +A T +Q+L QP++ GL
Sbjct:    1 MYFARWKIIAIFAVILLGVITALPNLLPADVRERMPAWLPSKTMNLGLDLQGGSQVLLEVDRADLVSQLTNQLMGDIRQVLRDERIGYTGLGRSGTQVSLRIRNSADVEKAITNIQELAQPVSTGL 126          
BLAST of mRNA_P-wetherbeei_contig57384.1.1 vs. uniprot
Match: A0A528MTV0_9HYPH (Protein translocase subunit SecDF (Fragment) n=1 Tax=Mesorhizobium sp. TaxID=1871066 RepID=A0A528MTV0_9HYPH)

HSP 1 Score: 110 bits (275), Expect = 3.010e-27
Identity = 53/127 (41.73%), Postives = 87/127 (68.50%), Query Frame = 0
Query:    1 MLHFSRFQMIAILASVLIGLIFALPNALPAPWQEAMLRTIGAKSMTLGLDLQGGSNVVMEVDGKDLRDQLMLQLSSDIRSSLREAKIGYKGITRTENGVSVRLSDIADAARAKTELQKLQQPLTGGL 127
            MLHFSR++ I I  +VL G+++A PN +PA    ++   +  + +TLGLDLQGGS++++++D +DL ++ +     ++R+SLR+A+IGY G+T T N + VR+ D      AKT L++L QP++ GL
Sbjct:    1 MLHFSRWKTILIWLTVLAGILYAAPNLVPASTLASLPNWLPKRQLTLGLDLQGGSHILLQIDRQDLANERLESARDEVRTSLRDAQIGYTGLTGTANSIQVRIRDQGQIEAAKTALERLTQPISTGL 127          
BLAST of mRNA_P-wetherbeei_contig57384.1.1 vs. uniprot
Match: A0A537NZZ0_9PROT (Protein translocase subunit SecD n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537NZZ0_9PROT)

HSP 1 Score: 113 bits (283), Expect = 6.350e-27
Identity = 62/127 (48.82%), Postives = 90/127 (70.87%), Query Frame = 0
Query:    1 MLHFSRFQMIAILASVLIGLIFALPNALPAPWQEAMLRTIGAKSMTLGLDLQGGSNVVMEVDGKDLRDQLMLQLSSDIRSSLREAKIGYKGITRTENGVSVRLSDIADAARAKTELQKLQQPLTGGL 127
            ML+FSR+++IAIL SVL G++ ALPN LP   Q+ +      + +TLGLDLQGGSNV+MEVD K+L D L++Q   D+R++LR A+I YK + RT +GV+V++++  D  +A   L+ L QP+  GL
Sbjct:    1 MLYFSRWKVIAILLSVLAGILCALPNILPKDIQDILRERTILRPVTLGLDLQGGSNVLMEVDRKELVDTLIVQQMGDVRAALRAARIAYK-LNRTPSGVTVQITEAGDVDKADDALKGLTQPIDTGL 126          
BLAST of mRNA_P-wetherbeei_contig57384.1.1 vs. uniprot
Match: UPI001AD9E920 (protein translocase subunit SecD n=1 Tax=Aquabacter sp. L1I39 TaxID=2820278 RepID=UPI001AD9E920)

HSP 1 Score: 112 bits (279), Expect = 2.510e-26
Identity = 59/128 (46.09%), Postives = 83/128 (64.84%), Query Frame = 0
Query:    1 MLHFSRFQMIAILASVLIGLIFALPNALPAPWQEAMLRTIGAKSMTLGLDLQGGSNVVMEVDGKDLRDQLMLQLSSDIRSSLREAKIGYKGITRTENGVSVRLSDIADAARAKTELQKLQQPLTGGLM 128
            MLHFSR + + ILA   +G++FALPN LP      +   + +  +TLGLDLQGGS++++EVDG  LR +   Q+  ++R  LRE KIGY G+   +  V  RL D AD+A+A TEL+KL  P++  LM
Sbjct:    1 MLHFSRLKTVLILAITALGILFALPNVLPPSVLAVLPHWLASSRVTLGLDLQGGSHILLEVDGAALRKERAEQVRDEVRKILREQKIGYTGLVIRDTIVQFRLRDPADSAKAVTELRKLAAPVSNALM 128          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57384.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3N5GU27_9HYPH1.300e-3653.91Protein translocase subunit SecDF (Fragment) n=1 T... [more]
UPI00198451B51.300e-3353.85Protein translocase subunit SecD n=1 Tax=Hyphomicr... [more]
UPI0018C622907.830e-3352.71protein translocase subunit SecD n=1 Tax=Aestuarii... [more]
A0A2W2AL25_9HYPH8.930e-3353.97Protein translocase subunit SecD n=1 Tax=Aestuarii... [more]
A0A6G6X1T4_9HYPH5.890e-3051.18Protein translocase subunit SecD n=1 Tax=Nordella ... [more]
UPI00190641BA2.230e-2950.39protein translocase subunit SecD n=1 Tax=Aestuarii... [more]
UPI001185EB0D1.030e-2749.21protein translocase subunit SecD n=1 Tax=Rhodoligo... [more]
A0A528MTV0_9HYPH3.010e-2741.73Protein translocase subunit SecDF (Fragment) n=1 T... [more]
A0A537NZZ0_9PROT6.350e-2748.82Protein translocase subunit SecD n=1 Tax=Alphaprot... [more]
UPI001AD9E9202.510e-2646.09protein translocase subunit SecD n=1 Tax=Aquabacte... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.3400coord: 47..122
e-value: 2.3E-9
score: 39.3
IPR022646Protein-export membrane protein SecD/SecF/SecDF, conserved sitePFAMPF07549Sec_GGcoord: 45..62
e-value: 4.5E-5
score: 22.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig57384contigP-wetherbeei_contig57384:66..449 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig57384.1.1mRNA_P-wetherbeei_contig57384.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig57384 66..449 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig57384.1.1 ID=prot_P-wetherbeei_contig57384.1.1|Name=mRNA_P-wetherbeei_contig57384.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=128bp
MLHFSRFQMIAILASVLIGLIFALPNALPAPWQEAMLRTIGAKSMTLGLD
LQGGSNVVMEVDGKDLRDQLMLQLSSDIRSSLREAKIGYKGITRTENGVS
VRLSDIADAARAKTELQKLQQPLTGGLM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022646SecD/SecF_CS