prot_P-wetherbeei_contig57238.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig57238.1.1
Unique Nameprot_P-wetherbeei_contig57238.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length34
Homology
BLAST of mRNA_P-wetherbeei_contig57238.1.1 vs. uniprot
Match: UPI001C3D9667 (PAS domain-containing protein n=1 Tax=Miltoncostaea oceani TaxID=2843216 RepID=UPI001C3D9667)

HSP 1 Score: 77.0 bits (188), Expect = 6.280e-17
Identity = 32/34 (94.12%), Postives = 33/34 (97.06%), Query Frame = 0
Query:    1 VPVFLCPRCAYRESSSERNVRHQPRGCSRCGFGF 34
            +PVFLCPRCAYRES SERNVRHQPRGCSRCGFGF
Sbjct:    1 MPVFLCPRCAYRESGSERNVRHQPRGCSRCGFGF 34          
BLAST of mRNA_P-wetherbeei_contig57238.1.1 vs. uniprot
Match: UPI001C3CF091 (PAS domain-containing protein n=1 Tax=Miltoncostaea marina TaxID=2843215 RepID=UPI001C3CF091)

HSP 1 Score: 75.1 bits (183), Expect = 3.560e-16
Identity = 31/34 (91.18%), Postives = 32/34 (94.12%), Query Frame = 0
Query:    1 VPVFLCPRCAYRESSSERNVRHQPRGCSRCGFGF 34
            +PVFLCPRCAYRE  SERNVRHQPRGCSRCGFGF
Sbjct:    1 MPVFLCPRCAYRERGSERNVRHQPRGCSRCGFGF 34          
BLAST of mRNA_P-wetherbeei_contig57238.1.1 vs. uniprot
Match: A0A7V9KCP0_9ACTN (PAS domain-containing protein n=2 Tax=Solirubrobacterales bacterium TaxID=1909295 RepID=A0A7V9KCP0_9ACTN)

HSP 1 Score: 47.4 bits (111), Expect = 1.910e-5
Identity = 17/34 (50.00%), Postives = 26/34 (76.47%), Query Frame = 0
Query:    3 VFLCPRCAYRESSSERNV--RHQPRGCSRCGFGF 34
            +F+CP C +R + ++R    R+QP+GCS+CGFGF
Sbjct:    4 LFICPNCGHRSTQTDRTAGFRNQPKGCSKCGFGF 37          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57238.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
UPI001C3D96676.280e-1794.12PAS domain-containing protein n=1 Tax=Miltoncostae... [more]
UPI001C3CF0913.560e-1691.18PAS domain-containing protein n=1 Tax=Miltoncostae... [more]
A0A7V9KCP0_9ACTN1.910e-550.00PAS domain-containing protein n=2 Tax=Solirubrobac... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig57238contigP-wetherbeei_contig57238:1..102 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig57238.1.1mRNA_P-wetherbeei_contig57238.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig57238 1..102 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig57238.1.1 ID=prot_P-wetherbeei_contig57238.1.1|Name=mRNA_P-wetherbeei_contig57238.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=34bp
VPVFLCPRCAYRESSSERNVRHQPRGCSRCGFGF
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