prot_P-wetherbeei_contig56978.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig56978.1.1
Unique Name	prot_P-wetherbeei_contig56978.1.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	100

Homology

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BLAST of mRNA_P-wetherbeei_contig56978.1.1 vs. uniprot
Match: A0A1H1JRC2_9HYPH (Rhamnose ABC transporter membrane protein n=3 Tax=unclassified Hyphomicrobiales TaxID=41292 RepID=A0A1H1JRC2_9HYPH)

HSP 1 Score: 100 bits (250), Expect = 1.780e-23
Identity = 58/100 (58.00%), Postives = 73/100 (73.00%), Query Frame = 0

Query:    1 MNFLLKHRELALSLIIALMVTGISVYAPAFASFENATSVLNDTSILCMLALGQMMVIVTRGIDLSVASNLALSGMLSASLAQNYPDLPVIAFIAVAIATG 100
            M   L +REL L  I+A MV GISVYAPAF   ++   VLNDTS L M+A+ QM+VI+TRGIDLSVA+NLAL+GML+A +AQ++  LP  AF  +AI  G
Sbjct:    1 MKAFLAYRELVLGCIVAAMVIGISVYAPAFGQRDSLIGVLNDTSFLFMMAVAQMIVILTRGIDLSVAANLALTGMLTAMVAQSHHGLPPAAFAMLAIGIG 100

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BLAST of mRNA_P-wetherbeei_contig56978.1.1 vs. uniprot
Match: A0A2X3I4N3_KLEPN (L-rhamnose ABC transporter, transmembrane component 2 n=1 Tax=Klebsiella pneumoniae TaxID=573 RepID=A0A2X3I4N3_KLEPN)

HSP 1 Score: 94.4 bits (233), Expect = 7.030e-23
Identity = 51/96 (53.12%), Postives = 71/96 (73.96%), Query Frame = 0

Query:    5 LKHRELALSLIIALMVTGISVYAPAFASFENATSVLNDTSILCMLALGQMMVIVTRGIDLSVASNLALSGMLSASLAQNYPDLPVIAFIAVAIATG 100
            LKHRE  L+++I LM+  I   AP+F S  N   + NDT+IL +LALGQMMV++T+GIDLS+A+NLAL+GM+ A L  +YP +PV+A +A+A   G
Sbjct:    7 LKHREALLAVVIILMIGAIGSRAPSFVSPGNLVEMFNDTAILIILALGQMMVLLTKGIDLSMAANLALTGMIVALLNAHYPGIPVVALLALATLLG 102

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BLAST of mRNA_P-wetherbeei_contig56978.1.1 vs. uniprot
Match: UPI000205B66C (ABC transporter permease n=1 Tax=Klebsiella sp. MS 92-3 TaxID=749535 RepID=UPI000205B66C)

HSP 1 Score: 95.5 bits (236), Expect = 7.940e-23
Identity = 52/96 (54.17%), Postives = 71/96 (73.96%), Query Frame = 0

Query:    5 LKHRELALSLIIALMVTGISVYAPAFASFENATSVLNDTSILCMLALGQMMVIVTRGIDLSVASNLALSGMLSASLAQNYPDLPVIAFIAVAIATG 100
            LKHRE  L+L+I LM+  I   AP+F S  N   + NDT+IL +LALGQMMV++T+GIDLS+A+NLAL+GM+ A L  +YP +PV+A +A+A   G
Sbjct:    7 LKHREALLALVIILMIGAIGSRAPSFVSPGNLVEMFNDTAILIILALGQMMVLLTKGIDLSMAANLALTGMIVALLNAHYPGIPVVALLALATLLG 102

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BLAST of mRNA_P-wetherbeei_contig56978.1.1 vs. uniprot
Match: A0A2X3CZE2_KLEPN (L-rhamnose ABC transporter, transmembrane component 2 n=2 Tax=Klebsiella pneumoniae TaxID=573 RepID=A0A2X3CZE2_KLEPN)

HSP 1 Score: 94.4 bits (233), Expect = 1.110e-22
Identity = 51/96 (53.12%), Postives = 71/96 (73.96%), Query Frame = 0

Query:    5 LKHRELALSLIIALMVTGISVYAPAFASFENATSVLNDTSILCMLALGQMMVIVTRGIDLSVASNLALSGMLSASLAQNYPDLPVIAFIAVAIATG 100
            LKHRE  L+++I LM+  I   AP+F S  N   + NDT+IL +LALGQMMV++T+GIDLS+A+NLAL+GM+ A L  +YP +PV+A +A+A   G
Sbjct:    7 LKHREALLAVVIILMIGAIGSRAPSFVSPGNLVEMFNDTAILIILALGQMMVLLTKGIDLSMAANLALTGMIVALLNAHYPGIPVVALLALATLLG 102

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BLAST of mRNA_P-wetherbeei_contig56978.1.1 vs. uniprot
Match: A0A2P7S280_9HYPH (Branched-chain amino acid ABC transporter permease n=1 Tax=Mesorhizobium ephedrae TaxID=2116701 RepID=A0A2P7S280_9HYPH)

HSP 1 Score: 98.2 bits (243), Expect = 1.830e-22
Identity = 53/100 (53.00%), Postives = 73/100 (73.00%), Query Frame = 0

Query:    1 MNFLLKHRELALSLIIALMVTGISVYAPAFASFENATSVLNDTSILCMLALGQMMVIVTRGIDLSVASNLALSGMLSASLAQNYPDLPVIAFIAVAIATG 100
            M  LL  RELAL+LI+ + V  I  Y P F +++N   +L +TS+L M+AL QM+VI+TRGIDLSVA+NLALSGM++A ++Q YPD P++  I   +ATG
Sbjct:    1 MTKLLNFRELALALILVVGVAAIGAYQPVFLAWDNIGDLLTETSVLFMMALAQMVVILTRGIDLSVAANLALSGMMAALVSQYYPDTPLLLMILTGVATG 100

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BLAST of mRNA_P-wetherbeei_contig56978.1.1 vs. uniprot
Match: A0A845SE89_9GAMM (ABC transporter permease n=2 Tax=Acerihabitans arboris TaxID=2691583 RepID=A0A845SE89_9GAMM)

HSP 1 Score: 97.4 bits (241), Expect = 4.120e-22
Identity = 54/100 (54.00%), Postives = 73/100 (73.00%), Query Frame = 0

Query:    1 MNFLLKHRELALSLIIALMVTGISVYAPAFASFENATSVLNDTSILCMLALGQMMVIVTRGIDLSVASNLALSGMLSASLAQNYPDLPVIAFIAVAIATG 100
            M  LLKHREL L+++I LM+ G+   +P F    N   + NDT+IL +LALGQMMV++T+GIDLS+A+NLAL+GM+ A L  +YPDLP+   +AVA  TG
Sbjct:    2 MKNLLKHRELFLAVVILLMILGVGSRSPEFLYPGNVLDMFNDTAILIILALGQMMVLLTKGIDLSMAANLALTGMIVALLNFHYPDLPIWLLVAVATLTG 101

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BLAST of mRNA_P-wetherbeei_contig56978.1.1 vs. uniprot
Match: A0A378AUX0_KLEPO (L-rhamnose ABC transporter, transmembrane component 2 n=2 Tax=Klebsiella pneumoniae TaxID=573 RepID=A0A378AUX0_KLEPO)

HSP 1 Score: 94.4 bits (233), Expect = 1.320e-21
Identity = 51/96 (53.12%), Postives = 71/96 (73.96%), Query Frame = 0

Query:    5 LKHRELALSLIIALMVTGISVYAPAFASFENATSVLNDTSILCMLALGQMMVIVTRGIDLSVASNLALSGMLSASLAQNYPDLPVIAFIAVAIATG 100
            LKHRE  L+++I LM+  I   AP+F S  N   + NDT+IL +LALGQMMV++T+GIDLS+A+NLAL+GM+ A L  +YP +PV+A +A+A   G
Sbjct:    7 LKHREALLAVVIILMIGAIGSRAPSFVSPGNLVEMFNDTAILIILALGQMMVLLTKGIDLSMAANLALTGMIVALLNAHYPGIPVVALLALATLLG 102

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BLAST of mRNA_P-wetherbeei_contig56978.1.1 vs. uniprot
Match: A0A135HT22_9HYPH (Branched-chain amino acid ABC transporter permease n=6 Tax=Hyphomicrobiales TaxID=356 RepID=A0A135HT22_9HYPH)

HSP 1 Score: 95.9 bits (237), Expect = 1.410e-21
Identity = 55/100 (55.00%), Postives = 70/100 (70.00%), Query Frame = 0

Query:    1 MNFLLKHRELALSLIIALMVTGISVYAPAFASFENATSVLNDTSILCMLALGQMMVIVTRGIDLSVASNLALSGMLSASLAQNYPDLPVIAFIAVAIATG 100
            MN +LKHRE+ L  IIA++V G S  AP FAS +N   + NDTSIL +LALGQM VI+T+ IDLSVA+NLA +GM  A L   +P+LP+   I VA+  G
Sbjct:    1 MNRILKHREILLFGIIAILVAGFSARAPGFASPKNLAGIFNDTSILIILALGQMAVILTKSIDLSVAANLAFTGMAVAMLNAAHPELPLALLIVVALGIG 100

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BLAST of mRNA_P-wetherbeei_contig56978.1.1 vs. uniprot
Match: A0A3E1ZRA3_9ENTR (ABC transporter permease n=220 Tax=Bacteria TaxID=2 RepID=A0A3E1ZRA3_9ENTR)

HSP 1 Score: 95.5 bits (236), Expect = 1.970e-21
Identity = 53/97 (54.64%), Postives = 71/97 (73.20%), Query Frame = 0

Query:    4 LLKHRELALSLIIALMVTGISVYAPAFASFENATSVLNDTSILCMLALGQMMVIVTRGIDLSVASNLALSGMLSASLAQNYPDLPVIAFIAVAIATG 100
            LLKHRE  L+ +I LMV  I   AP+F +  N   + NDTSIL +LALGQMMV++T+GIDLS+A+NLAL+GM+ A +  +YPD+PV A + +A A G
Sbjct:    5 LLKHREALLAAVIVLMVIAIGARAPSFIAPGNLVEIFNDTSILIILALGQMMVLLTKGIDLSMAANLALTGMIVALINFHYPDVPVWALLILATALG 101

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BLAST of mRNA_P-wetherbeei_contig56978.1.1 vs. uniprot
Match: B9K2Z0_AGRVS (ABC transporter membrane spanning protein n=6 Tax=Agrobacterium vitis TaxID=373 RepID=B9K2Z0_AGRVS)

HSP 1 Score: 95.5 bits (236), Expect = 1.970e-21
Identity = 54/100 (54.00%), Postives = 69/100 (69.00%), Query Frame = 0

Query:    1 MNFLLKHRELALSLIIALMVTGISVYAPAFASFENATSVLNDTSILCMLALGQMMVIVTRGIDLSVASNLALSGMLSASLAQNYPDLPVIAFIAVAIATG 100
            M  LLKHRE+AL  II L++ G +  A  FAS  N  ++ NDTSIL +LAL QM VI+T+ IDLSVA+NLALSGM  A +  N+P LP++  IA A+  G
Sbjct:    1 MKSLLKHREIALGAIILLLIAGFATRAGGFASPGNLATIFNDTSILIILALAQMTVILTKSIDLSVAANLALSGMAVAMMDSNFPGLPLVLLIAAAVLIG 100

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig56978.1.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig56978.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A1H1JRC2_9HYPH	1.780e-23	58.00	Rhamnose ABC transporter membrane protein n=3 Tax=...	[more]
A0A2X3I4N3_KLEPN	7.030e-23	53.13	L-rhamnose ABC transporter, transmembrane componen...	[more]
UPI000205B66C	7.940e-23	54.17	ABC transporter permease n=1 Tax=Klebsiella sp. MS...	[more]
A0A2X3CZE2_KLEPN	1.110e-22	53.13	L-rhamnose ABC transporter, transmembrane componen...	[more]
A0A2P7S280_9HYPH	1.830e-22	53.00	Branched-chain amino acid ABC transporter permease...	[more]
A0A845SE89_9GAMM	4.120e-22	54.00	ABC transporter permease n=2 Tax=Acerihabitans arb...	[more]
A0A378AUX0_KLEPO	1.320e-21	53.13	L-rhamnose ABC transporter, transmembrane componen...	[more]
A0A135HT22_9HYPH	1.410e-21	55.00	Branched-chain amino acid ABC transporter permease...	[more]
A0A3E1ZRA3_9ENTR	1.970e-21	54.64	ABC transporter permease n=220 Tax=Bacteria TaxID=...	[more]
B9K2Z0_AGRVS	1.970e-21	54.00	ABC transporter membrane spanning protein n=6 Tax=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR32196:SF21	ABC TRANSPORTER PERMEASE PROTEIN YPHD-RELATED	coord: 6..98
None	No IPR available	PANTHER	PTHR32196	ABC TRANSPORTER PERMEASE PROTEIN YPHD-RELATED-RELATED	coord: 6..98

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig56978	contig	P-wetherbeei_contig56978:2..301 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig56978.1.1	mRNA_P-wetherbeei_contig56978.1.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig56978 2..301 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig56978.1.1 ID=prot_P-wetherbeei_contig56978.1.1|Name=mRNA_P-wetherbeei_contig56978.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=100bp
MNFLLKHRELALSLIIALMVTGISVYAPAFASFENATSVLNDTSILCMLA
LGQMMVIVTRGIDLSVASNLALSGMLSASLAQNYPDLPVIAFIAVAIATG