prot_P-wetherbeei_contig56899.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig56899.1.1
Unique Name	prot_P-wetherbeei_contig56899.1.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	110

Homology

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BLAST of mRNA_P-wetherbeei_contig56899.1.1 vs. uniprot
Match: A0A6L7XWQ8_9GAMM (ABC transporter permease n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6L7XWQ8_9GAMM)

HSP 1 Score: 194 bits (494), Expect = 8.150e-60
Identity = 97/110 (88.18%), Postives = 106/110 (96.36%), Query Frame = 0

Query:    1 MMILLFGVTLGWLPTQGYVSIFDDPLEGLRHMLLPAFSLGITSCALIMRQTRSAMLEVLAQDYIRTARAKGMAERVVIWIHALRNSLLPVVTVLGLQTGRIFAGAVVIET 110
            M ILLFGVTLGWLPTQGYV IF+DP+EGLRHM LPAF+LG+TSCALIMRQ+RSAMLEVLAQDY+RTARAKG++ERVVIWIHALRN+LLPVVTV GLQTGRIFAGAVVIET
Sbjct:  152 MAILLFGVTLGWLPTQGYVDIFEDPVEGLRHMALPAFALGVTSCALIMRQSRSAMLEVLAQDYMRTARAKGLSERVVIWIHALRNALLPVVTVFGLQTGRIFAGAVVIET 261

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BLAST of mRNA_P-wetherbeei_contig56899.1.1 vs. uniprot
Match: A0A2E6A657_9GAMM (ABC transmembrane type-1 domain-containing protein n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E6A657_9GAMM)

HSP 1 Score: 187 bits (475), Expect = 6.000e-57
Identity = 94/110 (85.45%), Postives = 103/110 (93.64%), Query Frame = 0

Query:    1 MMILLFGVTLGWLPTQGYVSIFDDPLEGLRHMLLPAFSLGITSCALIMRQTRSAMLEVLAQDYIRTARAKGMAERVVIWIHALRNSLLPVVTVLGLQTGRIFAGAVVIET 110
            M ILLFGV LGWLPTQGYV+IFDDP+EGLRHM+LPAF+LGITSCALIMRQ+RSAMLEVLAQDY+RTARAKG+    VIW+HALRN+LLPVVTV GLQTGRIFAGAVVIET
Sbjct:  152 MSILLFGVILGWLPTQGYVNIFDDPVEGLRHMVLPAFALGITSCALIMRQSRSAMLEVLAQDYVRTARAKGLLGYKVIWVHALRNALLPVVTVFGLQTGRIFAGAVVIET 261

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BLAST of mRNA_P-wetherbeei_contig56899.1.1 vs. uniprot
Match: A0A6N9C0W4_9GAMM (ABC transporter permease n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6N9C0W4_9GAMM)

HSP 1 Score: 185 bits (470), Expect = 3.500e-56
Identity = 93/110 (84.55%), Postives = 103/110 (93.64%), Query Frame = 0

Query:    1 MMILLFGVTLGWLPTQGYVSIFDDPLEGLRHMLLPAFSLGITSCALIMRQTRSAMLEVLAQDYIRTARAKGMAERVVIWIHALRNSLLPVVTVLGLQTGRIFAGAVVIET 110
            M ILLFGVTLGWLPTQGYV IF+DPLEG+R+M+LPAF+LGITS A+IMRQ+RSAMLEVLAQDY+RTARAKGM E+ VIW HALRN+LLPVVTV GLQTGRIFAGAVVIET
Sbjct:  152 MAILLFGVTLGWLPTQGYVDIFEDPLEGIRYMILPAFALGITSSAIIMRQSRSAMLEVLAQDYVRTARAKGMREKAVIWRHALRNALLPVVTVFGLQTGRIFAGAVVIET 261

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BLAST of mRNA_P-wetherbeei_contig56899.1.1 vs. uniprot
Match: A0A6B0XML6_9BACT (ABC transporter permease n=7 Tax=Holophagales bacterium TaxID=2478486 RepID=A0A6B0XML6_9BACT)

HSP 1 Score: 184 bits (466), Expect = 1.360e-55
Identity = 89/110 (80.91%), Postives = 103/110 (93.64%), Query Frame = 0

Query:    1 MMILLFGVTLGWLPTQGYVSIFDDPLEGLRHMLLPAFSLGITSCALIMRQTRSAMLEVLAQDYIRTARAKGMAERVVIWIHALRNSLLPVVTVLGLQTGRIFAGAVVIET 110
            M ILLFGV LGWLP+QGYVS+FDDPL+ LRHM+LPAF+LG+TSCALIMRQ+RSAMLEVLAQDY+RT+RA+G  ER VIW HALRN+LLPV+T+LGLQTGRIFAGA+VIET
Sbjct:  152 MAILLFGVGLGWLPSQGYVSLFDDPLQSLRHMVLPAFALGVTSCALIMRQSRSAMLEVLAQDYLRTSRARGSRERTVIWSHALRNALLPVITILGLQTGRIFAGAIVIET 261

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BLAST of mRNA_P-wetherbeei_contig56899.1.1 vs. uniprot
Match: A0A2E7XH99_9GAMM (Peptide ABC transporter n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E7XH99_9GAMM)

HSP 1 Score: 181 bits (460), Expect = 1.060e-54
Identity = 91/110 (82.73%), Postives = 99/110 (90.00%), Query Frame = 0

Query:    1 MMILLFGVTLGWLPTQGYVSIFDDPLEGLRHMLLPAFSLGITSCALIMRQTRSAMLEVLAQDYIRTARAKGMAERVVIWIHALRNSLLPVVTVLGLQTGRIFAGAVVIET 110
            M ILLFGV LGWLPTQGYV IF+DP EG RHM+LPAF+LGITS ALIMRQ+RSAMLEVL QDY+RTARAKGM  R V+W+HALRN+LLPVVTV GLQTGRIFAGAVVIET
Sbjct:  152 MSILLFGVILGWLPTQGYVDIFEDPAEGFRHMILPAFALGITSWALIMRQSRSAMLEVLTQDYVRTARAKGMRPRSVVWVHALRNALLPVVTVFGLQTGRIFAGAVVIET 261

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BLAST of mRNA_P-wetherbeei_contig56899.1.1 vs. uniprot
Match: A0A2E6YV13_9GAMM (ABC transmembrane type-1 domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E6YV13_9GAMM)

HSP 1 Score: 180 bits (457), Expect = 3.100e-54
Identity = 93/110 (84.55%), Postives = 101/110 (91.82%), Query Frame = 0

Query:    1 MMILLFGVTLGWLPTQGYVSIFDDPLEGLRHMLLPAFSLGITSCALIMRQTRSAMLEVLAQDYIRTARAKGMAERVVIWIHALRNSLLPVVTVLGLQTGRIFAGAVVIET 110
            M ILLFGV LGWLPTQGYV I+  PLEGL+HM+LPAF+LGITS ALIMRQ+RSAMLEVLAQDY+RTARAKG+ ER VIWIHALRN+LLPVVTV GLQTGRIFAGAVVIET
Sbjct:  152 MCILLFGVKLGWLPTQGYVDIWQYPLEGLKHMVLPAFALGITSWALIMRQSRSAMLEVLAQDYMRTARAKGLYERTVIWIHALRNALLPVVTVFGLQTGRIFAGAVVIET 261

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BLAST of mRNA_P-wetherbeei_contig56899.1.1 vs. uniprot
Match: A0A2D8Y2U0_9GAMM (ABC transmembrane type-1 domain-containing protein n=3 Tax=Proteobacteria TaxID=1224 RepID=A0A2D8Y2U0_9GAMM)

HSP 1 Score: 171 bits (433), Expect = 1.270e-50
Identity = 85/110 (77.27%), Postives = 96/110 (87.27%), Query Frame = 0

Query:    1 MMILLFGVTLGWLPTQGYVSIFDDPLEGLRHMLLPAFSLGITSCALIMRQTRSAMLEVLAQDYIRTARAKGMAERVVIWIHALRNSLLPVVTVLGLQTGRIFAGAVVIET 110
            M IL FGV LGWLPTQGYV IF++P EGLRHM+LPAF+LGITS ALIMRQ RSAMLEVLAQDY+RTA AKG+    V+W+HALRN+LLPVVTV GLQTGRI AG++VIET
Sbjct:  152 MCILYFGVVLGWLPTQGYVDIFENPXEGLRHMILPAFALGITSWALIMRQCRSAMLEVLAQDYVRTAHAKGLLRTKVVWVHALRNALLPVVTVFGLQTGRIXAGSIVIET 261

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BLAST of mRNA_P-wetherbeei_contig56899.1.1 vs. uniprot
Match: UPI000487E6B2 (ABC transporter permease n=1 Tax=Bradyrhizobium sp. WSM1417 TaxID=754500 RepID=UPI000487E6B2)

HSP 1 Score: 157 bits (397), Expect = 3.240e-45
Identity = 82/110 (74.55%), Postives = 94/110 (85.45%), Query Frame = 0

Query:    2 MILLFGVTLGWLPTQGYVSIFDDPLEG-LRHMLLPAFSLGITSCALIMRQTRSAMLEVLAQDYIRTARAKGMAERVVIWIHALRNSLLPVVTVLGLQTGRIFAGAVVIET 110
            MILLFGV L WLP QGYV  F D L G L H++LPA +L +TSCAL+MRQTRSAMLEVLAQDY+RTARAKGM   +VIW+H+LRN+LLPVVT+LGLQ G+IFAGAVVIET
Sbjct:  153 MILLFGVELRWLPVQGYVP-FSDSLRGWLAHIVLPAIALAVTSCALLMRQTRSAMLEVLAQDYVRTARAKGMPNSIVIWVHSLRNALLPVVTLLGLQVGQIFAGAVVIET 261

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BLAST of mRNA_P-wetherbeei_contig56899.1.1 vs. uniprot
Match: UPI0019CCEDBD (ABC transporter permease n=1 Tax=Acetobacteraceae bacterium TaxID=1909293 RepID=UPI0019CCEDBD)

HSP 1 Score: 144 bits (364), Expect = 2.830e-40
Identity = 75/110 (68.18%), Postives = 90/110 (81.82%), Query Frame = 0

Query:    1 MMILLFGVTLGWLPTQGYVSIFDDPLEGLRHMLLPAFSLGITSCALIMRQTRSAMLEVLAQDYIRTARAKGMAERVVIWIHALRNSLLPVVTVLGLQTGRIFAGAVVIET 110
            M+ILLFGV L WLPTQG+V+   DP E LRHM+LPA +LG  S AL+MRQTRSA++EVLA DYIRTARAKG+A R V+  HA  N+LLPVVTV+GL+ GR+ AGAVV+ET
Sbjct:  152 MLILLFGVHLHWLPTQGFVAFNVDPWENLRHMVLPAIALGTGSAALLMRQTRSALIEVLALDYIRTARAKGLARRAVVLEHAWPNALLPVVTVMGLEIGRMLAGAVVVET 261

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BLAST of mRNA_P-wetherbeei_contig56899.1.1 vs. uniprot
Match: A0A7V1QSI1_9CHLR (ABC transporter permease n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A7V1QSI1_9CHLR)

HSP 1 Score: 141 bits (355), Expect = 6.400e-39
Identity = 70/108 (64.81%), Postives = 85/108 (78.70%), Query Frame = 0

Query:    3 ILLFGVTLGWLPTQGYVSIFDDPLEGLRHMLLPAFSLGITSCALIMRQTRSAMLEVLAQDYIRTARAKGMAERVVIWIHALRNSLLPVVTVLGLQTGRIFAGAVVIET 110
            ILLF V L WLP  G+VS+F+DP+ G+R + LP   LG  S AL+ RQTRS MLEVLAQDY+RTARAKG+ E  V+W+HALRN+LL VVTV+GL  GR+ AG+VVIET
Sbjct:  156 ILLFAVKLRWLPPSGFVSLFEDPMRGVRFLALPVLVLGWESAALVTRQTRSGMLEVLAQDYVRTARAKGLREARVVWVHALRNALLAVVTVIGLLVGRLLAGSVVIET 263

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig56899.1.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig56899.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6L7XWQ8_9GAMM	8.150e-60	88.18	ABC transporter permease n=2 Tax=Gammaproteobacter...	[more]
A0A2E6A657_9GAMM	6.000e-57	85.45	ABC transmembrane type-1 domain-containing protein...	[more]
A0A6N9C0W4_9GAMM	3.500e-56	84.55	ABC transporter permease n=1 Tax=Gammaproteobacter...	[more]
A0A6B0XML6_9BACT	1.360e-55	80.91	ABC transporter permease n=7 Tax=Holophagales bact...	[more]
A0A2E7XH99_9GAMM	1.060e-54	82.73	Peptide ABC transporter n=1 Tax=Gammaproteobacteri...	[more]
A0A2E6YV13_9GAMM	3.100e-54	84.55	ABC transmembrane type-1 domain-containing protein...	[more]
A0A2D8Y2U0_9GAMM	1.270e-50	77.27	ABC transmembrane type-1 domain-containing protein...	[more]
UPI000487E6B2	3.240e-45	74.55	ABC transporter permease n=1 Tax=Bradyrhizobium sp...	[more]
UPI0019CCEDBD	2.830e-40	68.18	ABC transporter permease n=1 Tax=Acetobacteraceae ...	[more]
A0A7V1QSI1_9CHLR	6.400e-39	64.81	ABC transporter permease n=2 Tax=Chloroflexi TaxID...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000515	ABC transporter type 1, transmembrane domain MetI-like	PFAM	PF00528	BPD_transp_1	coord: 9..110 e-value: 2.6E-18 score: 66.4
IPR000515	ABC transporter type 1, transmembrane domain MetI-like	PROSITE	PS50928	ABC_TM1	coord: 1..110 score: 9.21176
IPR000515	ABC transporter type 1, transmembrane domain MetI-like	CDD	cd06261	TM_PBP2	coord: 28..110 e-value: 4.38801E-8 score: 46.8881
IPR035906	MetI-like superfamily	GENE3D	1.10.3720.10		coord: 1..110 e-value: 6.6E-9 score: 37.5
IPR035906	MetI-like superfamily	SUPERFAMILY	161098	MetI-like	coord: 29..109
None	No IPR available	PANTHER	PTHR43163	DIPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN DPPB-RELATED	coord: 1..110

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig56899	contig	P-wetherbeei_contig56899:3..332 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig56899.1.1	mRNA_P-wetherbeei_contig56899.1.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig56899 3..512 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig56899.1.1 ID=prot_P-wetherbeei_contig56899.1.1|Name=mRNA_P-wetherbeei_contig56899.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=110bp
MMILLFGVTLGWLPTQGYVSIFDDPLEGLRHMLLPAFSLGITSCALIMRQ
TRSAMLEVLAQDYIRTARAKGMAERVVIWIHALRNSLLPVVTVLGLQTGR
IFAGAVVIET

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000515	MetI-like
IPR035906	MetI-like_sf