prot_P-wetherbeei_contig56798.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig56798.1.1
Unique Nameprot_P-wetherbeei_contig56798.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length164
Homology
BLAST of mRNA_P-wetherbeei_contig56798.1.1 vs. uniprot
Match: A0A2E5M9Z4_9GAMM (LPS export ABC transporter permease LptG n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E5M9Z4_9GAMM)

HSP 1 Score: 121 bits (304), Expect = 3.590e-30
Identity = 59/144 (40.97%), Postives = 92/144 (63.89%), Query Frame = 0
Query:   18 IPMVERQAQEYRSKTLPQTALGG--AEFWSRHENRFIRVGGVDFGRIPRDIEIYELGVRGRLQRLLQAHKADIVDDRKWLLHEVEERVLGEDSVQHKRMATLAWQSFLTPEQMATLIAPAHALSVFDLYSYIDEMRGSGIDTRQ 159
            +P++E  A E R++ L +T  GG  AEFW+R  N FIRVG V F  +P DIEIY+LG  G +  +L+A  AD++   +WLLHEV E  +    V  +  +  +WQSFL+P+QMA+L++P   L++ +LY Y++ +  + + + Q
Sbjct:  121 VPVLEDDASELRARKLSETVQGGGAAEFWTRDGNHFIRVGEVRFHSVPADIEIYDLGAGGTIASVLRAESADVLGPGRWLLHEVTESRIDGTEVSQRAESERSWQSFLSPDQMASLVSPIETLTLAELYHYVNYLEATALSSHQ 264          
BLAST of mRNA_P-wetherbeei_contig56798.1.1 vs. uniprot
Match: A0A2M7CWG4_9GAMM (LPS export ABC transporter permease LptG n=1 Tax=Xanthomonadales bacterium CG02_land_8_20_14_3_00_62_12 TaxID=1974108 RepID=A0A2M7CWG4_9GAMM)

HSP 1 Score: 104 bits (259), Expect = 1.200e-23
Identity = 68/159 (42.77%), Postives = 96/159 (60.38%), Query Frame = 0
Query:    1 MLVSVVVVTAMVGRATLIPMVERQAQEYRSKTLPQTALGGA--EFWSRHENRFIRVGGVDFGRIPRDIEIYELGVRGRLQRLLQAHKADIVDDRKWLLHEVEERVLGEDSVQHKRMATLAWQSFLTPEQMATLIAPAHALSVFDLYSYIDEMRGSGIDT 157
            M V V+V+T +V +   IP  ERQA   RS+ + QT + G+  +FW+R   R +RVG V  GR+P DIEIY+L    RL RL++A  ADI++  +WLLH V E VL   S       +L WQSFL+  Q+  LI PA+ LS   L SYI  ++ + +++
Sbjct:  106 MAVLVIVLTLLV-QTFGIPGWERQALRLRSQ-ITQTHVDGSITDFWTRTGGRLLRVGDVVMGRVPTDIEIYQLDEHDRLLRLIRAEHADILNQDEWLLHGVTETVLSGQSATTTSKPSLRWQSFLSQVQLGALIQPANTLSPQTLLSYIHRLQTNHLNS 262          
BLAST of mRNA_P-wetherbeei_contig56798.1.1 vs. uniprot
Match: A0A354ZAR0_9GAMM (LPS export ABC transporter permease LptG n=1 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A354ZAR0_9GAMM)

HSP 1 Score: 100 bits (250), Expect = 2.420e-22
Identity = 58/160 (36.25%), Postives = 94/160 (58.75%), Query Frame = 0
Query:    7 VVTAMVGRATLIPMVERQAQEYRSKTLPQTALGG--AEFWSRHENRFIRVGGVDFGRIPRDIEIYELGVRGRLQRLLQAHKADIVDDRKWLLHEVEERVLGEDSVQHKRMATLAWQSFLTPEQMATLIAPAHALSVFDLYSYIDEMRGSGIDTRQCQAML 164
            VV     R  +IP  ER A + R+  L +T + G   ++W+R   R +RVG V +GRIP D+EIY LG   R++ +++A +AD++DDR+WLLH+V  R L        R   L   + L  E++A+LI PA +L+  +L  YI  +  +G+++ + + +L
Sbjct:  111 VVAVFAARTWVIPDWERSALQLRATVLAETRIEGESTDYWTRSGERILRVGDVRYGRIPIDLEIYTLGPDRRVRSVIRAARADVIDDRRWLLHDVSLRELDRVLSAPIRHDRLELANPLDSERLASLIQPAESLAPRELIGYIASLEANGLNSHRYRFLL 270          
BLAST of mRNA_P-wetherbeei_contig56798.1.1 vs. uniprot
Match: A0A2N1XJA3_9GAMM (LPS export ABC transporter permease LptG n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2N1XJA3_9GAMM)

HSP 1 Score: 95.9 bits (237), Expect = 2.020e-20
Identity = 61/158 (38.61%), Postives = 90/158 (56.96%), Query Frame = 0
Query:    4 SVVVVTAMVGRATLIPMVERQAQEYRSKTLPQTALGGA--EFWSRHENRFIRVGGVDFGRIPRDIEIYELGVRGRLQRLLQAHKADIVDDRKWLLHEVEERVLGEDSVQHKRMATLAWQSFLTPEQMATLIAPAHALSVFDLYSYIDEMRGSGIDTRQ 159
            +++++ A V +   IP  ER A   R++ + QT + G+  EFW+R   R +RVG V  GRIP D+EIYEL  R RL  L++A +ADIV+  +WLL+ V E  +   S          W+SFL+  Q+  LI PA  LS  DL  YI  +  + +++ Q
Sbjct:  123 ALLILLAFVAQTYGIPHWERMALRLRAE-VTQTDVDGSNSEFWTRTGGRLLRVGEVVMGRIPTDLEIYELDERDRLIGLIRAERADIVNREEWLLYNVTESEINAQSATTTVEDRRIWRSFLSEPQLENLIQPAATLSPGDLLHYIVSLENNRLNSHQ 279          
BLAST of mRNA_P-wetherbeei_contig56798.1.1 vs. uniprot
Match: A0A831ZD87_9GAMM (LPS export ABC transporter permease LptG n=1 Tax=Crenotrichaceae bacterium TaxID=2268193 RepID=A0A831ZD87_9GAMM)

HSP 1 Score: 84.7 bits (208), Expect = 2.800e-16
Identity = 48/151 (31.79%), Postives = 79/151 (52.32%), Query Frame = 0
Query:    5 VVVVTAMVGRATLIPMVERQAQEYRS-KTLPQTALGGAEFWSRHENRFIRVGGVDFGRIPRDIEIYELGVRGRLQRLLQAHKADIVDDRKWLLHEVEERVLGEDSVQHKRMATLAWQSFLTPEQMATLIAPAHALSVFDLYSYIDEMRGSG 154
            ++++ A +    + P +E+QA    S KT   +  G   FWSR++  F+RVG + FGR+P DIEI+E     +L   ++A  A +  +  W L     +   + ++   R     W++FLT E+M  L  P  +LS+  L SY+D +R  G
Sbjct:  144 IILLVAFLFEQWIAPPLEQQALRLNSMKTSGLSLAGNNGFWSRNKQLFVRVGDIQFGRVPSDIEIFEFDNAHQLLTYIRAESARLQQNGAWSLTNASVKQFHDKTIDQSRHDDFQWKTFLTAEEMKALEYPIDSLSIQSLASYVDYLRSVG 294          
BLAST of mRNA_P-wetherbeei_contig56798.1.1 vs. uniprot
Match: A0A7Y3GJ43_9DELT (LPS export ABC transporter permease LptG n=1 Tax=Desulfobacterales bacterium TaxID=2044940 RepID=A0A7Y3GJ43_9DELT)

HSP 1 Score: 84.3 bits (207), Expect = 3.040e-16
Identity = 45/140 (32.14%), Postives = 83/140 (59.29%), Query Frame = 0
Query:   17 LIPMVERQAQEYRSKTLPQTALGGAE--FWSRHENRFIRVGGVDFGRIPRDIEIYELGVRGRLQRLLQAHKADIVDDRKWLLHEVEERVLGEDSVQHKRMATLAWQSFLTPEQMATLIAPAHALSVFDLYSYIDEMRGSG 154
            ++P +++ A+  R+  L  + +   +  FW+R    +I VG    G +  D++I+E   +GRL+    A +ADI D+R+WLL ++ ++ + + S+  + M +L   SFL+ +Q+  L  PA ++S FDL+ Y+  +RGSG
Sbjct:  121 VVPPMDQLARTRRAMALSSSGVTLTQQGFWARRGFSYIHVGKTLSGGVATDVDIFESDEKGRLRVFTYAREADIQDNRRWLLKDITQKNITDQSITTRHMESLTLDSFLSSDQVDILELPAISMSSFDLHRYVRALRGSG 260          
BLAST of mRNA_P-wetherbeei_contig56798.1.1 vs. uniprot
Match: A0A358JL08_9PROT (LPS export ABC transporter permease LptG n=4 Tax=Nitrosomonas TaxID=914 RepID=A0A358JL08_9PROT)

HSP 1 Score: 83.6 bits (205), Expect = 5.700e-16
Identity = 52/140 (37.14%), Postives = 76/140 (54.29%), Query Frame = 0
Query:   19 PMVERQAQEYRSKTLPQTA-LG-GAEFWSRHENRFIRVGGVDFGRIPRDIEIYELGVRGRLQRLLQAHKADIVDDRKWLLHEVEERVLGEDSVQHKRMATLAWQSFLTPEQMATLIAPAHALSVFDLYSYIDEMRGSGID 156
            P ++++A   R+  L QTA LG G   W+R+E   +R+G +       DIEI  L   G L   + A  ADI +D  W+L +V  R   E  +   R   L+WQSFL PE +ATL  P  +LS F+L  +++ +R +G D
Sbjct:  122 PQLQQKAISNRAAALNQTAELGRGLGIWTRNEQNILRIGQMLHAEKAADIEILHLDNTGFLSAHIHAQTADIRNDDAWILRQVIVRKFTEKEIFLTRAEALSWQSFLNPEDIATLTKPPESLSPFELVRHVNFLRSTGQD 261          
BLAST of mRNA_P-wetherbeei_contig56798.1.1 vs. uniprot
Match: A0A2K2VWN6_9DELT (LPS export ABC transporter permease LptG n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A2K2VWN6_9DELT)

HSP 1 Score: 79.0 bits (193), Expect = 2.730e-14
Identity = 46/138 (33.33%), Postives = 76/138 (55.07%), Query Frame = 0
Query:   19 PMVERQAQEYRSKTLPQTA--LGGAEFWSRHENRFIRVGGVDFGRIPRDIEIYELGVRGRLQRLLQAHKADIVDDRKWLLHEVEERVLGEDSVQHKRMATLAWQSFLTPEQMATLIAPAHALSVFDLYSYIDEMRGSG 154
            P +E+ A+  RS  +  T   L    FW+R  N FI VG    G I   +++YE    G L+  + A +ADI ++++W+L +++++V+ E  +    + T+A +SFL+ EQ+  L  P  +LS  DLY Y   +R  G
Sbjct:  123 PPMEQHARLSRSLAISDTGILLTKDGFWARQGNSFIHVGKTLSGGIATGLDVYEGDKEGGLRAFIHAREADIHNNKRWVLKDIQKKVIEEQRITTHNLPTMALESFLSTEQVNILELPPDSLSPSDLYKYNQALRQRG 260          
BLAST of mRNA_P-wetherbeei_contig56798.1.1 vs. uniprot
Match: A0A1H9KNP2_9PROT (Lipopolysaccharide export system permease protein n=3 Tax=Nitrosomonas TaxID=914 RepID=A0A1H9KNP2_9PROT)

HSP 1 Score: 77.4 bits (189), Expect = 9.680e-14
Identity = 48/140 (34.29%), Postives = 74/140 (52.86%), Query Frame = 0
Query:   19 PMVERQAQEYRSKTLPQTA-LG-GAEFWSRHENRFIRVGGVDFGRIPRDIEIYELGVRGRLQRLLQAHKADIVDDRKWLLHEVEERVLGEDSVQHKRMATLAWQSFLTPEQMATLIAPAHALSVFDLYSYIDEMRGSGID 156
            P ++++A   R+  L QTA LG G   W+R+E   +R+G +   +   D+EI        LQ  + A  A+I  ++ W+L  V  R      +   R  TL+WQSFL PE +ATL  P  +LS  +L  ++D +R +G D
Sbjct:  122 PQLQQKAISNRAVALNQTAELGKGLGIWTRNERNILRIGQMLHAKKAADVEILNFDQANLLQAHIHAEFAEIHSNKAWILTNVVIRKFTGSQILLSRAETLSWQSFLKPEDIATLTKPPESLSPIELVRHVDFLRSTGQD 261          
BLAST of mRNA_P-wetherbeei_contig56798.1.1 vs. uniprot
Match: A0A524IPI2_9BACT (LPS export ABC transporter permease LptG n=1 Tax=Nitrospirales bacterium TaxID=2358460 RepID=A0A524IPI2_9BACT)

HSP 1 Score: 76.3 bits (186), Expect = 2.590e-13
Identity = 40/132 (30.30%), Postives = 72/132 (54.55%), Query Frame = 0
Query:   19 PMVERQAQEYRSKTLPQTAL--GGAEFWSRHENRFIRVGGVDFGRIPRDIEIYELGVRGRLQRLLQAHKADIVDDRKWLLHEVEERVLGEDSVQHKRMATLAWQSFLTPEQMATLIAPAHALSVFDLYSYID 148
            P +++ A   RS  L  + +  G    W R  NR+IR+  + +G IP++I+I+E    G +   L A +AD+ + +KW+L  ++++++    V    + +L W S    E+M  L  PA +L+  DL+ YI+
Sbjct:  125 PTLDQYAHISRSLALSDSHVYQGKQGLWFREGNRYIRIKTLKYGEIPQEIDIFEFNPNGEMIAYLYAEEADVQNPQKWVLKNIQKKIIDGHRVSEVALPSLMWDSPFNREEMRLLTLPASSLAPSDLFRYIE 256          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig56798.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A2E5M9Z4_9GAMM3.590e-3040.97LPS export ABC transporter permease LptG n=1 Tax=G... [more]
A0A2M7CWG4_9GAMM1.200e-2342.77LPS export ABC transporter permease LptG n=1 Tax=X... [more]
A0A354ZAR0_9GAMM2.420e-2236.25LPS export ABC transporter permease LptG n=1 Tax=X... [more]
A0A2N1XJA3_9GAMM2.020e-2038.61LPS export ABC transporter permease LptG n=3 Tax=G... [more]
A0A831ZD87_9GAMM2.800e-1631.79LPS export ABC transporter permease LptG n=1 Tax=C... [more]
A0A7Y3GJ43_9DELT3.040e-1632.14LPS export ABC transporter permease LptG n=1 Tax=D... [more]
A0A358JL08_9PROT5.700e-1637.14LPS export ABC transporter permease LptG n=4 Tax=N... [more]
A0A2K2VWN6_9DELT2.730e-1433.33LPS export ABC transporter permease LptG n=2 Tax=P... [more]
A0A1H9KNP2_9PROT9.680e-1434.29Lipopolysaccharide export system permease protein ... [more]
A0A524IPI2_9BACT2.590e-1330.30LPS export ABC transporter permease LptG n=1 Tax=N... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005495Permease LptG/LptF-relatedPFAMPF03739LptF_LptGcoord: 2..159
e-value: 8.7E-11
score: 41.3
IPR005495Permease LptG/LptF-relatedPANTHERPTHR33529SLR0882 PROTEIN-RELATEDcoord: 5..160
NoneNo IPR availablePANTHERPTHR33529:SF2LIPOPOLYSACCHARIDE EXPORT SYSTEM PERMEASE PROTEIN LPTGcoord: 5..160

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig56798contigP-wetherbeei_contig56798:22..513 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig56798.1.1mRNA_P-wetherbeei_contig56798.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig56798 1..513 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig56798.1.1 ID=prot_P-wetherbeei_contig56798.1.1|Name=mRNA_P-wetherbeei_contig56798.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=164bp
MLVSVVVVTAMVGRATLIPMVERQAQEYRSKTLPQTALGGAEFWSRHENR
FIRVGGVDFGRIPRDIEIYELGVRGRLQRLLQAHKADIVDDRKWLLHEVE
ERVLGEDSVQHKRMATLAWQSFLTPEQMATLIAPAHALSVFDLYSYIDEM
RGSGIDTRQCQAML
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005495LptG/LptF_permease