prot_P-wetherbeei_contig56650.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig56650.1.1
Unique Nameprot_P-wetherbeei_contig56650.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length158
Homology
BLAST of mRNA_P-wetherbeei_contig56650.1.1 vs. uniprot
Match: A0A1H6I4L8_9BRAD (Tripartite-type tricarboxylate transporter, receptor component TctC n=8 Tax=Tardiphaga TaxID=1395974 RepID=A0A1H6I4L8_9BRAD)

HSP 1 Score: 280 bits (716), Expect = 2.210e-92
Identity = 140/158 (88.61%), Postives = 145/158 (91.77%), Query Frame = 0
Query:    1 MRGTTHLPNRRQFVTTSLGAAAWLGAPSLVRASTWPTKPIKMLAGSAAGGQTDQFARVYGEYLQRELGQTVVVENKAGAGGAVAAMELKRSDPDGHTLMICNTTAYMLNPVLIKDIKYSVPQDFAWVTVMPGGSLSLMVSEKIGAKTLKDFIDYARKT 158
            MR    L NRRQFVT   GAAA L APSLVRA++WPTKPIK+LAGSAAGGQTDQF+RVYGEYL RELGQTVVVENKAGAGGAVAAMELKRSDPDGHTLMICNTTAYMLNPVLIKDIKYSVPQDFAWV VMPGGSL LMVSEK+GAKTLKDFIDYARKT
Sbjct:    1 MRNNLRLLNRRQFVTVGAGAAALLSAPSLVRANSWPTKPIKILAGSAAGGQTDQFSRVYGEYLSRELGQTVVVENKAGAGGAVAAMELKRSDPDGHTLMICNTTAYMLNPVLIKDIKYSVPQDFAWVAVMPGGSLPLMVSEKVGAKTLKDFIDYARKT 158          
BLAST of mRNA_P-wetherbeei_contig56650.1.1 vs. uniprot
Match: UPI001BA49075 (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Rhodopseudomonas sp. SK50-23 TaxID=340268 RepID=UPI001BA49075)

HSP 1 Score: 272 bits (695), Expect = 3.290e-89
Identity = 134/152 (88.16%), Postives = 144/152 (94.74%), Query Frame = 0
Query:    7 LPNRRQFVTTSLGAAAWLGAPSLVRASTWPTKPIKMLAGSAAGGQTDQFARVYGEYLQRELGQTVVVENKAGAGGAVAAMELKRSDPDGHTLMICNTTAYMLNPVLIKDIKYSVPQDFAWVTVMPGGSLSLMVSEKIGAKTLKDFIDYARKT 158
            L NRRQFVT   GAAA L APS++RA++WPTKPIK+LAGSAAGGQTDQFARVYGEYLQRELGQTVVVENKAGAGGAVAA+ELKR+DPDGHTLMICNTTAYMLNPVLIKDIKY+VPQDFAWVTVMPGGSL L+VSEK GAKTLKDFIDYA+KT
Sbjct:    7 LLNRRQFVTAGAGAAALLSAPSILRANSWPTKPIKILAGSAAGGQTDQFARVYGEYLQRELGQTVVVENKAGAGGAVAALELKRADPDGHTLMICNTTAYMLNPVLIKDIKYNVPQDFAWVTVMPGGSLPLVVSEKTGAKTLKDFIDYAKKT 158          
BLAST of mRNA_P-wetherbeei_contig56650.1.1 vs. uniprot
Match: A0A4V1ZPH6_9BRAD (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Bradyrhizobiaceae bacterium TaxID=2072420 RepID=A0A4V1ZPH6_9BRAD)

HSP 1 Score: 266 bits (680), Expect = 1.820e-86
Identity = 129/158 (81.65%), Postives = 142/158 (89.87%), Query Frame = 0
Query:    1 MRGTTHLPNRRQFVTTSLGAAAWLGAPSLVRASTWPTKPIKMLAGSAAGGQTDQFARVYGEYLQRELGQTVVVENKAGAGGAVAAMELKRSDPDGHTLMICNTTAYMLNPVLIKDIKYSVPQDFAWVTVMPGGSLSLMVSEKIGAKTLKDFIDYARKT 158
            +R   HL NRRQ      GAAA + APSL+RA++WPTKPIK+LAGSAAGGQTDQF+RVYGEYLQRELGQTVV+ENKAGAGGAVAA+ELKRSDPDGHTLMICNTTAYMLNPVLIKD+KY+VPQDF WV VMPGGSL L+VSEKIGAKTL DFIDYA+KT
Sbjct:   35 VRNNLHLLNRRQLFAAGAGAAAMVSAPSLLRANSWPTKPIKILAGSAAGGQTDQFSRVYGEYLQRELGQTVVIENKAGAGGAVAALELKRSDPDGHTLMICNTTAYMLNPVLIKDVKYNVPQDFTWVAVMPGGSLPLVVSEKIGAKTLADFIDYAKKT 192          
BLAST of mRNA_P-wetherbeei_contig56650.1.1 vs. uniprot
Match: A0A257KPG9_9BRAD (Uncharacterized protein n=2 Tax=Bradyrhizobiaceae TaxID=41294 RepID=A0A257KPG9_9BRAD)

HSP 1 Score: 264 bits (675), Expect = 5.820e-86
Identity = 129/158 (81.65%), Postives = 141/158 (89.24%), Query Frame = 0
Query:    1 MRGTTHLPNRRQFVTTSLGAAAWLGAPSLVRASTWPTKPIKMLAGSAAGGQTDQFARVYGEYLQRELGQTVVVENKAGAGGAVAAMELKRSDPDGHTLMICNTTAYMLNPVLIKDIKYSVPQDFAWVTVMPGGSLSLMVSEKIGAKTLKDFIDYARKT 158
            +R    L +RRQFV    GA A L APSLVRAS+WPTKPIK+LAGSA GGQTDQFAR+YGEYLQRELGQT+VVENKAGAGGAVAA+ELKR+DPDGHTLMICNTTAYMLNPVLIKDIKY+VPQDF WV VMPGGSL L+V EK+GAKTLKDFIDYA+KT
Sbjct:   16 VRNKLRLLSRRQFVAAGAGATALLSAPSLVRASSWPTKPIKILAGSAPGGQTDQFARLYGEYLQRELGQTIVVENKAGAGGAVAALELKRADPDGHTLMICNTTAYMLNPVLIKDIKYNVPQDFTWVAVMPGGSLPLVVGEKVGAKTLKDFIDYAKKT 173          
BLAST of mRNA_P-wetherbeei_contig56650.1.1 vs. uniprot
Match: A0A515KIW7_9BRAD (Tripartite tricarboxylate transporter substrate binding protein n=2 Tax=Tardiphaga TaxID=1395974 RepID=A0A515KIW7_9BRAD)

HSP 1 Score: 257 bits (657), Expect = 2.500e-83
Identity = 127/158 (80.38%), Postives = 142/158 (89.87%), Query Frame = 0
Query:    1 MRGTTHLPNRRQFVTTSLGAAAWLGAPSLVRASTWPTKPIKMLAGSAAGGQTDQFARVYGEYLQRELGQTVVVENKAGAGGAVAAMELKRSDPDGHTLMICNTTAYMLNPVLIKDIKYSVPQDFAWVTVMPGGSLSLMVSEKIGAKTLKDFIDYARKT 158
            MR  + L NRRQ +    GAAA L APSL+RASTWPTKPI+MLAGSAAGGQTDQFARVYGEYL RELGQTVVVENKAGAGGAVAAMELKR++PDGHTLMICNTTAYMLNPV+IKDIKY+V +DFAWV+VMPGGSL L+V+EK+GAKTL +FI YAR+T
Sbjct:   10 MRNRSLLLNRRQLIGAGAGAAALLSAPSLLRASTWPTKPIRMLAGSAAGGQTDQFARVYGEYLSRELGQTVVVENKAGAGGAVAAMELKRAEPDGHTLMICNTTAYMLNPVVIKDIKYNVAEDFAWVSVMPGGSLPLVVNEKVGAKTLAEFIAYARRT 167          
BLAST of mRNA_P-wetherbeei_contig56650.1.1 vs. uniprot
Match: UPI0019C4EDD5 (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Tardiphaga sp. TaxID=1926292 RepID=UPI0019C4EDD5)

HSP 1 Score: 248 bits (633), Expect = 8.440e-80
Identity = 119/151 (78.81%), Postives = 135/151 (89.40%), Query Frame = 0
Query:    7 LPNRRQFVTTSLGAAAWLGAPSLVRASTWPTKPIKMLAGSAAGGQTDQFARVYGEYLQRELGQTVVVENKAGAGGAVAAMELKRSDPDGHTLMICNTTAYMLNPVLIKDIKYSVPQDFAWVTVMPGGSLSLMVSEKIGAKTLKDFIDYARK 157
            L +RRQ +T   G AAWL APSLV+A TWPT+PI++LAGSAAGGQTDQFARVYGEYL R+LGQTVVVENKAGAGGA+ A ELKRS+PDGHTLMICNTTAYMLNPVLIKDI+Y+V +DFAW+TVMPGGSL  +VSEK+GAKTL +FI YARK
Sbjct:    7 LLDRRQLMTAGAGIAAWLSAPSLVKADTWPTRPIRILAGSAAGGQTDQFARVYGEYLSRQLGQTVVVENKAGAGGALPAAELKRSEPDGHTLMICNTTAYMLNPVLIKDIQYNVAEDFAWITVMPGGSLPFLVSEKVGAKTLPEFIAYARK 157          
BLAST of mRNA_P-wetherbeei_contig56650.1.1 vs. uniprot
Match: A0A257KU30_9BRAD (Uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium PARB1 TaxID=2015576 RepID=A0A257KU30_9BRAD)

HSP 1 Score: 210 bits (534), Expect = 4.040e-64
Identity = 103/155 (66.45%), Postives = 127/155 (81.94%), Query Frame = 0
Query:    4 TTHLPNRRQFVTTSLGAAAWLGAPSLVRASTWPTKPIKMLAGSAAGGQTDQFARVYGEYLQRELGQTVVVENKAGAGGAVAAMELKRSDPDGHTLMICNTTAYMLNPVLIKDIKYSVPQDFAWVTVMPGGSLSLMVSEKIGAKTLKDFIDYARKT 158
            TT L  RR+ +T   GAAA L APS  RA+TWP+KPI++LAG AAGGQTDQF+R YG+Y+ RE GQTVVVENK GAGGA+AA+ELKRS PDGHTLMI NTT +MLNPVL+KDI+Y   +DFA +++MP GS+ L VSEK+ AKTL +FI+YA+K+
Sbjct:   64 TTALLTRRRLMTAGAGAAALLCAPSFGRANTWPSKPIRILAGFAAGGQTDQFSRAYGDYISRETGQTVVVENKTGAGGALAAVELKRSAPDGHTLMITNTTTFMLNPVLMKDIRYDPLKDFAMISMMPSGSVPLFVSEKVPAKTLPEFIEYAKKS 218          
BLAST of mRNA_P-wetherbeei_contig56650.1.1 vs. uniprot
Match: UPI001BF0B49F (Tripartite tricarboxylate transporter substrate binding protein n=2 Tax=Rhodopseudomonas sp. SK50-23 TaxID=340268 RepID=UPI001BF0B49F)

HSP 1 Score: 201 bits (511), Expect = 7.970e-61
Identity = 97/137 (70.80%), Postives = 119/137 (86.86%), Query Frame = 0
Query:   22 AWLGAPSLVRASTWPTKPIKMLAGSAAGGQTDQFARVYGEYLQRELGQTVVVENKAGAGGAVAAMELKRSDPDGHTLMICNTTAYMLNPVLIKDIKYSVPQDFAWVTVMPGGSLSLMVSEKIGAKTLKDFIDYARKT 158
            A L APSLVRA++WPTKPI++LAG AAGGQTDQF+R YG+Y+ RE+GQTVVVENK GAGGA+AA+ELKRS PDGHTLMI NTT +MLNPVL+KDI+Y   +DFA +++MP GS+ L VSEK+ AKTL +FIDYA+K+
Sbjct:   68 ALLCAPSLVRANSWPTKPIRILAGFAAGGQTDQFSRAYGDYISREVGQTVVVENKTGAGGALAAVELKRSAPDGHTLMITNTTTFMLNPVLMKDIRYDPLKDFAMISMMPSGSVPLFVSEKVPAKTLAEFIDYAKKS 204          
BLAST of mRNA_P-wetherbeei_contig56650.1.1 vs. uniprot
Match: A0A1W9IHP2_9PROT (Uncharacterized protein n=1 Tax=Proteobacteria bacterium SG_bin9 TaxID=1827385 RepID=A0A1W9IHP2_9PROT)

HSP 1 Score: 195 bits (495), Expect = 2.950e-59
Identity = 92/131 (70.23%), Postives = 112/131 (85.50%), Query Frame = 0
Query:   27 PSLVRASTWPTKPIKMLAGSAAGGQTDQFARVYGEYLQRELGQTVVVENKAGAGGAVAAMELKRSDPDGHTLMICNTTAYMLNPVLIKDIKYSVPQDFAWVTVMPGGSLSLMVSEKIGAKTLKDFIDYARK 157
            PS+VRA  WP+KPIK++ G AAGGQTDQF+RVYGEY+ RELGQ VVVENK GA GA+AAME+KRSDPDG+TLM+ NT  YMLNP+L KD+KYS+ +DF +V++MP G L L++SEKIGAKTL +FI YARK
Sbjct:    2 PSIVRAQAWPSKPIKIVCGFAAGGQTDQFSRVYGEYIARELGQPVVVENKTGASGAIAAMEVKRSDPDGYTLMMSNTGTYMLNPLLQKDVKYSIAEDFVFVSMMPTGGLPLLISEKIGAKTLAEFIAYARK 132          
BLAST of mRNA_P-wetherbeei_contig56650.1.1 vs. uniprot
Match: UPI001BA84EBB (tripartite tricarboxylate transporter substrate binding protein n=2 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=UPI001BA84EBB)

HSP 1 Score: 182 bits (462), Expect = 5.300e-54
Identity = 92/149 (61.74%), Postives = 109/149 (73.15%), Query Frame = 0
Query:   10 RRQFVTTSLGAAAWLGAPSLVRASTWPTKPIKMLAGSAAGGQTDQFARVYGEYLQRELGQTVVVENKAGAGGAVAAMELKRSDPDGHTLMICNTTAYMLNPVLIKDIKYSVPQDFAWVTVMPGGSLSLMVSEKIGAKTLKDFIDYARKT 158
            RRQ +      AA   A      + WP KPIKML G AAGGQTD FAR YG+Y+ R++GQTVVVENK G GGAV+A+ELKRS PDG+T MI NTT YM NPV +KDI+Y V +DF  V++MP GSL L+VSEK GAK L++FI YARKT
Sbjct:    9 RRQLMAAGAATAAVASAGPGFANTAWPAKPIKMLVGFAAGGQTDLFARTYGDYISRQVGQTVVVENKVGGGGAVSAVELKRSAPDGYTAMINNTTTYMTNPVTMKDIRYDVGKDFVVVSIMPTGSLPLIVSEKCGAKNLEEFIAYARKT 157          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig56650.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1H6I4L8_9BRAD2.210e-9288.61Tripartite-type tricarboxylate transporter, recept... [more]
UPI001BA490753.290e-8988.16tripartite tricarboxylate transporter substrate bi... [more]
A0A4V1ZPH6_9BRAD1.820e-8681.65Tripartite tricarboxylate transporter substrate bi... [more]
A0A257KPG9_9BRAD5.820e-8681.65Uncharacterized protein n=2 Tax=Bradyrhizobiaceae ... [more]
A0A515KIW7_9BRAD2.500e-8380.38Tripartite tricarboxylate transporter substrate bi... [more]
UPI0019C4EDD58.440e-8078.81Tripartite tricarboxylate transporter substrate bi... [more]
A0A257KU30_9BRAD4.040e-6466.45Uncharacterized protein n=1 Tax=Bradyrhizobiaceae ... [more]
UPI001BF0B49F7.970e-6170.80Tripartite tricarboxylate transporter substrate bi... [more]
A0A1W9IHP2_9PROT2.950e-5970.23Uncharacterized protein n=1 Tax=Proteobacteria bac... [more]
UPI001BA84EBB5.300e-5461.74tripartite tricarboxylate transporter substrate bi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005064Bordetella uptake genePFAMPF03401TctCcoord: 56..157
e-value: 7.0E-21
score: 74.5
IPR005064Bordetella uptake genePANTHERPTHR42928TRICARBOXYLATE-BINDING PROTEINcoord: 9..157
NoneNo IPR availableGENE3D3.40.190.10coord: 134..157
e-value: 2.7E-37
score: 130.4
NoneNo IPR availablePANTHERPTHR42928:SF5BLR1237 PROTEINcoord: 9..157
IPR042100Bordetella uptake gene, domain 1GENE3D3.40.190.150Bordetella uptake gene, domain 1coord: 36..133
e-value: 2.7E-37
score: 130.4
IPR006311Twin-arginine translocation pathway, signal sequencePROSITEPS51318TATcoord: 1..32
score: 7.763235

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig56650contigP-wetherbeei_contig56650:43..516 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig56650.1.1mRNA_P-wetherbeei_contig56650.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig56650 16..516 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig56650.1.1 ID=prot_P-wetherbeei_contig56650.1.1|Name=mRNA_P-wetherbeei_contig56650.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=158bp
MRGTTHLPNRRQFVTTSLGAAAWLGAPSLVRASTWPTKPIKMLAGSAAGG
QTDQFARVYGEYLQRELGQTVVVENKAGAGGAVAAMELKRSDPDGHTLMI
CNTTAYMLNPVLIKDIKYSVPQDFAWVTVMPGGSLSLMVSEKIGAKTLKD
FIDYARKT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005064BUG
IPR042100Bug_dom1
IPR006311TAT_signal