prot_P-wetherbeei_contig5662.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig5662.2.1
Unique Nameprot_P-wetherbeei_contig5662.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length74
Homology
BLAST of mRNA_P-wetherbeei_contig5662.2.1 vs. uniprot
Match: A0A835Z9L2_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9L2_9STRA)

HSP 1 Score: 103 bits (258), Expect = 2.390e-25
Identity = 42/57 (73.68%), Postives = 47/57 (82.46%), Query Frame = 0
Query:   16 DLEAGTSPECAICYNAVDPSLEDYMITPCDHVFHEACLVRWMQIKMECPTCRATLPP 72
            DLE GT PECAICYN VDPSL  +M+TPCDH FH  CL +W+ IKMECPTCR+TLPP
Sbjct:  238 DLETGTGPECAICYNVVDPSLRTHMVTPCDHCFHTECLQQWINIKMECPTCRSTLPP 294          
BLAST of mRNA_P-wetherbeei_contig5662.2.1 vs. uniprot
Match: A0A6H5JDM9_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDM9_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 3.650e-23
Identity = 48/73 (65.75%), Postives = 51/73 (69.86%), Query Frame = 0
Query:    3 AVTGTGGG--AEAQRDLEAGTSPECAICYNAVDPSLEDYMITPCDHVFHEACLVRWMQIKMECPTCRATLPPA 73
            A T T GG  +E  RDLEAG   EC ICY AVD  L DYM+TPCDHVFH+ CL RWM IK  CPTCR  LPPA
Sbjct:  698 ARTETAGGQPSEESRDLEAGNCLECTICYAAVDAELGDYMLTPCDHVFHQGCLTRWMDIKTTCPTCRQELPPA 770          
BLAST of mRNA_P-wetherbeei_contig5662.2.1 vs. uniprot
Match: A0A7S2HH52_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HH52_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 8.790e-19
Identity = 35/58 (60.34%), Postives = 42/58 (72.41%), Query Frame = 0
Query:   14 QRDLEAGTSPECAICYNAVDPSLEDYMITPCDHVFHEACLVRWMQIKMECPTCRATLP 71
            Q  +E G+S EC ICY+ +D +  DYMITPCDH+FH  CL RWM+ KMECP CR  LP
Sbjct:  258 QDTVENGSSLECVICYSTIDQATRDYMITPCDHIFHPTCLERWMEQKMECPVCRHVLP 315          
BLAST of mRNA_P-wetherbeei_contig5662.2.1 vs. uniprot
Match: A0A1D1YLS5_9ARAE (Transmembrane E3 ubiquitin-protein ligase 1 n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1YLS5_9ARAE)

HSP 1 Score: 83.6 bits (205), Expect = 4.400e-17
Identity = 35/54 (64.81%), Postives = 38/54 (70.37%), Query Frame = 0
Query:   22 SPECAICYNAVD--PSLEDYMITPCDHVFHEACLVRWMQIKMECPTCRATLPPA 73
            S +C IC  A+D  P   DYM+TPCDH FH  CL RWM IKMECPTCR  LPPA
Sbjct:  530 STDCVICMTAIDVTPPSNDYMVTPCDHFFHSGCLQRWMDIKMECPTCRRPLPPA 583          
BLAST of mRNA_P-wetherbeei_contig5662.2.1 vs. uniprot
Match: L8GD19_ACACA (Zinc finger family protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GD19_ACACA)

HSP 1 Score: 83.2 bits (204), Expect = 5.410e-17
Identity = 33/56 (58.93%), Postives = 41/56 (73.21%), Query Frame = 0
Query:   16 DLEAGTSPECAICYNAVDPSLEDYMITPCDHVFHEACLVRWMQIKMECPTCRATLP 71
            D E G S EC IC + V P+  DYM+TPC+H+FH+ CL +WM+ KMECPTCR  LP
Sbjct:  400 DAEQGESKECVICMSVVLPNQRDYMVTPCNHLFHQNCLEQWMEFKMECPTCRRPLP 455          
BLAST of mRNA_P-wetherbeei_contig5662.2.1 vs. uniprot
Match: A0A453BFP2_AEGTS (RING-type domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453BFP2_AEGTS)

HSP 1 Score: 76.6 bits (187), Expect = 7.200e-17
Identity = 30/52 (57.69%), Postives = 37/52 (71.15%), Query Frame = 0
Query:   24 ECAICYNAVDPS--LEDYMITPCDHVFHEACLVRWMQIKMECPTCRATLPPA 73
            +C IC   +D S    +YM+ PC+H+FH  CL RWM IKMECPTCR +LPPA
Sbjct:   25 DCVICMTTIDLSQRTSEYMVAPCEHIFHSGCLQRWMDIKMECPTCRRSLPPA 76          
BLAST of mRNA_P-wetherbeei_contig5662.2.1 vs. uniprot
Match: D3AZF4_POLPP (RING-type domain-containing protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3AZF4_POLPP)

HSP 1 Score: 82.4 bits (202), Expect = 1.110e-16
Identity = 32/49 (65.31%), Postives = 38/49 (77.55%), Query Frame = 0
Query:   25 CAICYNAVDPSLEDYMITPCDHVFHEACLVRWMQIKMECPTCRATLPPA 73
            C IC N V+ +  DYMITPC+H+FH  CL+RWM  KMECPTCR T+PPA
Sbjct:  489 CVICMNDVEANDSDYMITPCEHLFHSRCLLRWMDYKMECPTCRRTIPPA 537          
BLAST of mRNA_P-wetherbeei_contig5662.2.1 vs. uniprot
Match: A0A199W324_ANACO (Transmembrane E3 ubiquitin-protein ligase 1 n=1 Tax=Ananas comosus TaxID=4615 RepID=A0A199W324_ANACO)

HSP 1 Score: 82.0 bits (201), Expect = 1.520e-16
Identity = 34/52 (65.38%), Postives = 39/52 (75.00%), Query Frame = 0
Query:   24 ECAICYNAVDPSLE--DYMITPCDHVFHEACLVRWMQIKMECPTCRATLPPA 73
            +C IC  A+D S    DYM+TPCDH+FH  CL RWM IKMECPTCR +LPPA
Sbjct:  506 DCVICMTAIDLSQRSNDYMVTPCDHLFHSGCLQRWMDIKMECPTCRRSLPPA 557          
BLAST of mRNA_P-wetherbeei_contig5662.2.1 vs. uniprot
Match: UPI0018AE1498 (transmembrane E3 ubiquitin-protein ligase FLY1-like n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI0018AE1498)

HSP 1 Score: 80.9 bits (198), Expect = 3.890e-16
Identity = 37/63 (58.73%), Postives = 42/63 (66.67%), Query Frame = 0
Query:   15 RDLEAGTSP--ECAICYNAVD--PSLEDYMITPCDHVFHEACLVRWMQIKMECPTCRATLPPA 73
            R LE  T+   +C IC  A+D      DYM+TPCDH FH  CL RWM IKMECPTCR +LPPA
Sbjct:  495 RRLETDTTQAADCVICMTAIDVMQRSNDYMVTPCDHFFHSGCLQRWMDIKMECPTCRRSLPPA 557          
BLAST of mRNA_P-wetherbeei_contig5662.2.1 vs. uniprot
Match: A0A6I9QGT5_ELAGV (transmembrane E3 ubiquitin-protein ligase FLY1 isoform X1 n=12 Tax=Arecaceae TaxID=4710 RepID=A0A6I9QGT5_ELAGV)

HSP 1 Score: 80.9 bits (198), Expect = 3.910e-16
Identity = 34/60 (56.67%), Postives = 42/60 (70.00%), Query Frame = 0
Query:   16 DLEAGTSPECAICYNAVDPSLE--DYMITPCDHVFHEACLVRWMQIKMECPTCRATLPPA 73
            + +A  + +C IC  A+D +    DYM+TPCDH FH  CL RWM IKMECPTCR +LPPA
Sbjct:  505 ESDATRTTDCVICMTAIDLTQRSNDYMVTPCDHFFHSGCLQRWMDIKMECPTCRRSLPPA 564          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5662.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z9L2_9STRA2.390e-2573.68RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A6H5JDM9_9PHAE3.650e-2365.75RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A7S2HH52_9STRA8.790e-1960.34Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A1D1YLS5_9ARAE4.400e-1764.81Transmembrane E3 ubiquitin-protein ligase 1 n=1 Ta... [more]
L8GD19_ACACA5.410e-1758.93Zinc finger family protein n=1 Tax=Acanthamoeba ca... [more]
A0A453BFP2_AEGTS7.200e-1757.69RING-type domain-containing protein n=1 Tax=Aegilo... [more]
D3AZF4_POLPP1.110e-1665.31RING-type domain-containing protein n=1 Tax=Polysp... [more]
A0A199W324_ANACO1.520e-1665.38Transmembrane E3 ubiquitin-protein ligase 1 n=1 Ta... [more]
UPI0018AE14983.890e-1658.73transmembrane E3 ubiquitin-protein ligase FLY1-lik... [more]
A0A6I9QGT5_ELAGV3.910e-1656.67transmembrane E3 ubiquitin-protein ligase FLY1 iso... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 24..67
e-value: 0.0026
score: 12.2
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 25..66
e-value: 4.7E-7
score: 39.5
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 24..67
e-value: 3.1E-12
score: 46.6
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 25..67
score: 12.976127
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 9..73
e-value: 2.5E-17
score: 63.8
NoneNo IPR availablePANTHERPTHR22763RING ZINC FINGER PROTEINcoord: 20..72
NoneNo IPR availablePANTHERPTHR22763:SF165DSC E3 UBIQUITIN LIGASE COMPLEX SUBUNIT 1coord: 20..72
NoneNo IPR availableCDDcd16448RING-H2coord: 25..67
e-value: 2.83446E-10
score: 48.2171
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 20..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5662contigP-wetherbeei_contig5662:2910..3429 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5662.2.1mRNA_P-wetherbeei_contig5662.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig5662 2740..3576 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig5662.2.1 ID=prot_P-wetherbeei_contig5662.2.1|Name=mRNA_P-wetherbeei_contig5662.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=74bp
MAAVTGTGGGAEAQRDLEAGTSPECAICYNAVDPSLEDYMITPCDHVFHE
ACLVRWMQIKMECPTCRATLPPA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011016Znf_RING-CH
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD