prot_P-wetherbeei_contig5649.1.2 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig5649.1.2
Unique Nameprot_P-wetherbeei_contig5649.1.2
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length243
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig5649.1.2 vs. uniprot
Match: I2CS30_NANGC (Palmitoyltransferase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=I2CS30_NANGC)

HSP 1 Score: 104 bits (259), Expect = 2.340e-23
Identity = 69/206 (33.50%), Postives = 93/206 (45.15%), Query Frame = 0 
Query:   21 VSNMVLICGEKEGRFPAQLLVGPDKACIPATLALVAVPSIFWLLYVAPALGSGVVVAGAVSFAVATSMYLAVACSTPGIV-WRECDAGESGDGXXXXXXXXXXXXXXXXXXXXXXXXGYAPPMTAAGTSRVVVRSAAVAGAMEMQVPRRGARCGVCDVIRPAGAXXXXXXXXXILKHDHXXPWTSKCIGRDNIHVFYAFLLAMALH 225
            +  M+L+CG K+G FP Q LVGPD  C+  T  +V VPSIF+L+ VAP + S +V  G  SF +    +   ACS PGIV W+  + GE                                P+    TS     +A+  G    + P     C  C++ RP GA         +   DH  PWT KCIGR N+  FY FL  + +H
Sbjct:   39 IGRMILLCGRKDGIFPFQCLVGPDWPCMLITYTMVCVPSIFFLILVAPRVSSVIVWVGLASFMLTLFFFSLTACSDPGIVFWQLPNGGEE-----RSIDPESGTVVLHNNDCGNGSISATLPVVDQSTSL----AASSQGFSSARNPVPQIPCSRCELSRPMGASHCYECEVCVKDLDHHCPWTGKCIGRKNLQFFYLFLTFLTVH 235
[Close]
BLAST of mRNA_P-wetherbeei_contig5649.1.2 vs. uniprot
Match: A0A3M6VCD4_9STRA (Palmitoyltransferase n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VCD4_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 7.830e-5
Identity = 22/53 (41.51%), Postives = 30/53 (56.60%), Query Frame = 0 
Query:  172 CGVCDVIRPAGAXXXXXXXXXILKHDHXXPWTSKCIGRDNIHVFYAFLLAMAL 224
            C  C   RP GA         I ++DH  PWT KC+G++N+  FYA+LL + L
Sbjct:  186 CDHCGSYRPEGALHCMDCQVCIEEYDHHCPWTGKCVGKNNVRYFYAWLLFLVL 238
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5649.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
I2CS30_NANGC2.340e-2333.50Palmitoyltransferase n=2 Tax=Nannochloropsis gadit... [more]
A0A3M6VCD4_9STRA7.830e-541.51Palmitoyltransferase n=1 Tax=Peronospora effusa Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001594Palmitoyltransferase, DHHC domainPFAMPF01529DHHCcoord: 172..235
e-value: 7.4E-20
score: 71.4
NoneNo IPR availablePANTHERPTHR22883:SF379PALMITOYLTRANSFERASE ZDHHC24-RELATEDcoord: 63..235
NoneNo IPR availablePANTHERPTHR22883ZINC FINGER DHHC DOMAIN CONTAINING PROTEINcoord: 63..235
NoneNo IPR availablePROSITEPS50216DHHCcoord: 170..220
score: 22.281008

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5649contigP-wetherbeei_contig5649:1219..2425 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5649.1.2mRNA_P-wetherbeei_contig5649.1.2Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig5649 49..2986 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig5649.1.2 ID=prot_P-wetherbeei_contig5649.1.2|Name=mRNA_P-wetherbeei_contig5649.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=243bp
MGAALTLERERPPHFYCCRRVSNMVLICGEKEGRFPAQLLVGPDKACIPA
TLALVAVPSIFWLLYVAPALGSGVVVAGAVSFAVATSMYLAVACSTPGIV
WRECDAGESGDGGGSRGGADSNDGNGGGGGSGGGAAGYAPPMTAAGTSRV
VVRSAAVAGAMEMQVPRRGARCGVCDVIRPAGAMHCARCNACILKHDHHC
PWTSKCIGRDNIHVFYAFLLAMALHGWFVMVSTVVWMMTGPA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001594Palmitoyltrfase_DHHC