prot_P-wetherbeei_contig56183.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig56183.1.1
Unique Nameprot_P-wetherbeei_contig56183.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length124
Homology
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BLAST of mRNA_P-wetherbeei_contig56183.1.1 vs. uniprot
Match: A0A7S9VSZ2_9SPHN (YaiO family outer membrane beta-barrel protein n=1 Tax=Sphingobium sp. Cam5-1 TaxID=2789327 RepID=A0A7S9VSZ2_9SPHN)

HSP 1 Score: 56.6 bits (135), Expect = 7.400e-7
Identity = 43/95 (45.26%), Postives = 53/95 (55.79%), Query Frame = 0 
Query:   13 AQARAALAAQDYAAATLRFEALVARHPGDADYVLGLGQTHLARGDAATAIALLERARGLAPEYLDVLQVLASAYVVAGRRAAAHATYQAAAQLVP 107
            AQARAALA QD+AAA  R E   + +P DA+ +  LG  +        AI+ L RA  LAPE LD+   LA AY+ +G RAAA     A  Q  P
Sbjct:   28 AQARAALARQDFAAAVGRLEQADSANPNDAEILRMLGSAYAFDKRYPQAISTLRRAELLAPEDLDIRAALARAYLWSGDRAAAERELVAMEQRSP 122
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig56183.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S9VSZ2_9SPHN7.400e-745.26YaiO family outer membrane beta-barrel protein n=1... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 5..122
e-value: 2.7E-16
score: 61.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 8..118
NoneNo IPR availablePFAMPF13432TPR_16coord: 12..74
e-value: 1.9E-8
score: 34.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig56183contigP-wetherbeei_contig56183:8..379 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig56183.1.1mRNA_P-wetherbeei_contig56183.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig56183 8..379 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig56183.1.1 ID=prot_P-wetherbeei_contig56183.1.1|Name=mRNA_P-wetherbeei_contig56183.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=124bp
ARAADDAVDDAYAQARAALAAQDYAAATLRFEALVARHPGDADYVLGLGQ
THLARGDAATAIALLERARGLAPEYLDVLQVLASAYVVAGRRAAAHATYQ
AAAQLVPDAQWAQQGLRATLLPAP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf