prot_P-wetherbeei_contig56092.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig56092.1.1
Unique Nameprot_P-wetherbeei_contig56092.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length49
Homology
BLAST of mRNA_P-wetherbeei_contig56092.1.1 vs. uniprot
Match: A0A7C2VJ02_9BACT (Metal-dependent transcriptional regulator n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7C2VJ02_9BACT)

HSP 1 Score: 67.4 bits (163), Expect = 2.860e-12
Identity = 35/49 (71.43%), Postives = 40/49 (81.63%), Query Frame = 0
Query:    1 MEDYLKAIFRLQEGTGRVTTQALARRLSVAPASATNMLKRLAELQLVNY 49
            MEDYLKAI++LQ+  G  TTQALAR L V PASATNMLK+LA L+LV Y
Sbjct:    8 MEDYLKAIYKLQQQAGSATTQALARLLKVKPASATNMLKKLARLKLVRY 56          
BLAST of mRNA_P-wetherbeei_contig56092.1.1 vs. uniprot
Match: A0A3M1LE39_9CHLR (Metal-dependent transcriptional regulator n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3M1LE39_9CHLR)

HSP 1 Score: 65.1 bits (157), Expect = 1.720e-11
Identity = 33/49 (67.35%), Postives = 40/49 (81.63%), Query Frame = 0
Query:    1 MEDYLKAIFRLQEGTGRVTTQALARRLSVAPASATNMLKRLAELQLVNY 49
            MEDYLKAI++LQ+ TGR TT A+A  L VAPAS T MLK+LA L+LV+Y
Sbjct:    6 MEDYLKAIYKLQQPTGRATTTAIAEALEVAPASVTGMLKKLAALKLVDY 54          
BLAST of mRNA_P-wetherbeei_contig56092.1.1 vs. uniprot
Match: A0A399ZVN7_9CHLR (DtxR family transcriptional regulator (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A399ZVN7_9CHLR)

HSP 1 Score: 61.6 bits (148), Expect = 2.250e-11
Identity = 32/49 (65.31%), Postives = 42/49 (85.71%), Query Frame = 0
Query:    1 MEDYLKAIFRLQEGTGRVTTQALARRLSVAPASATNMLKRLAELQLVNY 49
            +E+YLKAI++LQE +  VTT ALA+ L+VAPASATNM+K+LA LQLV +
Sbjct:    6 IENYLKAIYQLQENSETVTTTALAQYLAVAPASATNMIKKLARLQLVRH 54          
BLAST of mRNA_P-wetherbeei_contig56092.1.1 vs. uniprot
Match: A0A1Q7FUR2_9BACT (HTH dtxR-type domain-containing protein n=1 Tax=Armatimonadetes bacterium 13_1_40CM_64_14 TaxID=1805026 RepID=A0A1Q7FUR2_9BACT)

HSP 1 Score: 62.0 bits (149), Expect = 2.400e-10
Identity = 33/49 (67.35%), Postives = 40/49 (81.63%), Query Frame = 0
Query:    1 MEDYLKAIFRLQEGTGRVTTQALARRLSVAPASATNMLKRLAELQLVNY 49
            MEDYLKAI++LQ G   V+T ALARRL VA ASAT M++RLA L+LV+Y
Sbjct:    8 MEDYLKAIYKLQRGRDSVSTSALARRLHVAAASATAMIQRLARLKLVSY 56          
BLAST of mRNA_P-wetherbeei_contig56092.1.1 vs. uniprot
Match: A0A7C5E9Y4_9CHLR (Metal-dependent transcriptional regulator n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C5E9Y4_9CHLR)

HSP 1 Score: 60.5 bits (145), Expect = 8.940e-10
Identity = 31/49 (63.27%), Postives = 36/49 (73.47%), Query Frame = 0
Query:    1 MEDYLKAIFRLQEGTGRVTTQALARRLSVAPASATNMLKRLAELQLVNY 49
            M+DYLKAI++L E  G+  T ALA  L VAPAS TNM K+LAEL LV Y
Sbjct:    1 MQDYLKAIYKLHEQNGQAPTSALAEMLGVAPASVTNMCKKLAELHLVEY 49          
BLAST of mRNA_P-wetherbeei_contig56092.1.1 vs. uniprot
Match: A0A849ZXG6_9CHLR (Metal-dependent transcriptional regulator n=1 Tax=Caldilineales bacterium TaxID=2306055 RepID=A0A849ZXG6_9CHLR)

HSP 1 Score: 59.7 bits (143), Expect = 1.990e-9
Identity = 31/49 (63.27%), Postives = 36/49 (73.47%), Query Frame = 0
Query:    1 MEDYLKAIFRLQEGTGRVTTQALARRLSVAPASATNMLKRLAELQLVNY 49
            +EDYLK IF +Q   G+V T  LA RL VAPASAT M+KRLAE+ LV Y
Sbjct:    6 VEDYLKTIFEIQRERGKVATTMLAERLGVAPASATGMIKRLAEMHLVVY 54          
BLAST of mRNA_P-wetherbeei_contig56092.1.1 vs. uniprot
Match: A0A7V9VII6_9CHLR (Metal-dependent transcriptional regulator n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V9VII6_9CHLR)

HSP 1 Score: 59.7 bits (143), Expect = 2.250e-9
Identity = 30/49 (61.22%), Postives = 38/49 (77.55%), Query Frame = 0
Query:    1 MEDYLKAIFRLQEGTGRVTTQALARRLSVAPASATNMLKRLAELQLVNY 49
            M+DYLKAI+RLQ+G GR TT  LA  L ++  SATNM+KRLAE+ LV +
Sbjct:   24 MQDYLKAIYRLQQGDGRATTLNLANELGLSGPSATNMIKRLAEISLVEH 72          
BLAST of mRNA_P-wetherbeei_contig56092.1.1 vs. uniprot
Match: A0A3M1XFE9_9BACT (Metal-dependent transcriptional regulator n=1 Tax=Calditrichaeota bacterium TaxID=2212469 RepID=A0A3M1XFE9_9BACT)

HSP 1 Score: 59.3 bits (142), Expect = 2.750e-9
Identity = 29/49 (59.18%), Postives = 37/49 (75.51%), Query Frame = 0
Query:    1 MEDYLKAIFRLQEGTGRVTTQALARRLSVAPASATNMLKRLAELQLVNY 49
            +EDYLK IF+L+   G+V T  LARRL +AP S T MLK+L+E+ LVNY
Sbjct:    5 IEDYLKIIFQLEREEGKVATTVLARRLGLAPGSVTGMLKKLSEMNLVNY 53          
BLAST of mRNA_P-wetherbeei_contig56092.1.1 vs. uniprot
Match: A0A3D1V2X5_9CHLR (DtxR family transcriptional regulator n=4 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3D1V2X5_9CHLR)

HSP 1 Score: 58.9 bits (141), Expect = 3.860e-9
Identity = 31/49 (63.27%), Postives = 37/49 (75.51%), Query Frame = 0
Query:    1 MEDYLKAIFRLQEGTGRVTTQALARRLSVAPASATNMLKRLAELQLVNY 49
            MEDYLK I+RL E   R TTQA+A RL+VA  S T M+KRLAEL LV++
Sbjct:    1 MEDYLKTIYRLSEDGQRATTQAIAERLAVAAPSVTGMIKRLAELHLVDH 49          
BLAST of mRNA_P-wetherbeei_contig56092.1.1 vs. uniprot
Match: B9L1D6_THERP (Transcriptional repressor n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) TaxID=309801 RepID=B9L1D6_THERP)

HSP 1 Score: 58.9 bits (141), Expect = 4.360e-9
Identity = 31/49 (63.27%), Postives = 36/49 (73.47%), Query Frame = 0
Query:    1 MEDYLKAIFRLQEGTGRVTTQALARRLSVAPASATNMLKRLAELQLVNY 49
            MEDYLK IF L+   GRVTTQA+A RL V   S TNMLKR+A L LV++
Sbjct:   17 MEDYLKVIFALERDEGRVTTQAIAERLRVQSPSVTNMLKRMAALDLVDH 65          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig56092.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C2VJ02_9BACT2.860e-1271.43Metal-dependent transcriptional regulator n=1 Tax=... [more]
A0A3M1LE39_9CHLR1.720e-1167.35Metal-dependent transcriptional regulator n=1 Tax=... [more]
A0A399ZVN7_9CHLR2.250e-1165.31DtxR family transcriptional regulator (Fragment) n... [more]
A0A1Q7FUR2_9BACT2.400e-1067.35HTH dtxR-type domain-containing protein n=1 Tax=Ar... [more]
A0A7C5E9Y4_9CHLR8.940e-1063.27Metal-dependent transcriptional regulator n=1 Tax=... [more]
A0A849ZXG6_9CHLR1.990e-963.27Metal-dependent transcriptional regulator n=1 Tax=... [more]
A0A7V9VII6_9CHLR2.250e-961.22Metal-dependent transcriptional regulator n=1 Tax=... [more]
A0A3M1XFE9_9BACT2.750e-959.18Metal-dependent transcriptional regulator n=1 Tax=... [more]
A0A3D1V2X5_9CHLR3.860e-963.27DtxR family transcriptional regulator n=4 Tax=Chlo... [more]
B9L1D6_THERP4.360e-963.27Transcriptional repressor n=1 Tax=Thermomicrobium ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022687DTXR-type HTH domainPFAMPF01325Fe_dep_represscoord: 1..49
e-value: 4.1E-16
score: 58.9
IPR022687DTXR-type HTH domainPROSITEPS50944HTH_DTXRcoord: 1..49
score: 19.594261
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 1..49
e-value: 3.0E-19
score: 70.7
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 1..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig56092contigP-wetherbeei_contig56092:3..149 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig56092.1.1mRNA_P-wetherbeei_contig56092.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig56092 3..158 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig56092.1.1 ID=prot_P-wetherbeei_contig56092.1.1|Name=mRNA_P-wetherbeei_contig56092.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=49bp
MEDYLKAIFRLQEGTGRVTTQALARRLSVAPASATNMLKRLAELQLVNY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022687HTH_DTXR
IPR036388WH-like_DNA-bd_sf
IPR036390WH_DNA-bd_sf