prot_P-wetherbeei_contig56091.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig56091.1.1
Unique Name	prot_P-wetherbeei_contig56091.1.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	150

Homology

[Close]

BLAST of mRNA_P-wetherbeei_contig56091.1.1 vs. uniprot
Match: A0A317H9C6_9PROT (Crp/Fnr family transcriptional regulator n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A317H9C6_9PROT)

HSP 1 Score: 191 bits (485), Expect = 4.670e-59
Identity = 94/142 (66.20%), Postives = 118/142 (83.10%), Query Frame = 0

Query:    9 SLPPDHIKTLSEQGSVKAYPKNTIIVSEGERSDTLFIILSGKVKVFLADEEGKEVLLSTQGPGEYFGEMILDEGPRSASVMTLEPSRFAVITTAQFKQFLADNPEAGVELVKSLINRVRELTRAVGNLALLDVYGRVARLLL 150
            SLP  ++KTLSEQ  V+A+P+N +I++EG+R+D++FII+SG+VKV+LADE G+E+LL  QG GEYFGE+ILD+G RSASVMTLEP + AV++  QFK FLA NPEA  EL+K    R+RELT  VGNLALLDVYGRVARLLL
Sbjct:   13 SLPAAYLKTLSEQAVVRAFPRNAVIINEGDRADSMFIIMSGRVKVYLADESGREMLLRVQGAGEYFGEVILDDGLRSASVMTLEPCKLAVVSIEQFKAFLAANPEAAFELLKRFAQRIRELTGTVGNLALLDVYGRVARLLL 154

[Close]

BLAST of mRNA_P-wetherbeei_contig56091.1.1 vs. uniprot
Match: A0A1F4DZQ9_9PROT (Crp/Fnr family transcriptional regulator n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 TaxID=1797497 RepID=A0A1F4DZQ9_9PROT)

HSP 1 Score: 182 bits (461), Expect = 1.920e-55
Identity = 90/144 (62.50%), Postives = 116/144 (80.56%), Query Frame = 0

Query:    7 LWSLPPDHIKTLSEQGSVKAYPKNTIIVSEGERSDTLFIILSGKVKVFLADEEGKEVLLSTQGPGEYFGEMILDEGPRSASVMTLEPSRFAVITTAQFKQFLADNPEAGVELVKSLINRVRELTRAVGNLALLDVYGRVARLLL 150
            L  L  D ++TLS QG VK +P+NT+IVSEG+ +D+L+II++G+VKVF++DEEGKE++L TQGPGEYFGEM+LD  PRSASVMTLEPSRFAVI   +F+ FL  +P   + L++ LI R R LT +V +LAL+DVYGRVARLLL
Sbjct:    9 LTYLNEDELRTLSAQGVVKNFPRNTVIVSEGDETDSLYIIIAGRVKVFVSDEEGKEIVLGTQGPGEYFGEMVLDGRPRSASVMTLEPSRFAVIPKNKFRDFLLSHPGFSLHLIEKLIRRTRALTESVKSLALMDVYGRVARLLL 152

[Close]

BLAST of mRNA_P-wetherbeei_contig56091.1.1 vs. uniprot
Match: A0A1F4EYP5_9PROT (Crp/Fnr family transcriptional regulator n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_20 TaxID=1797505 RepID=A0A1F4EYP5_9PROT)

HSP 1 Score: 178 bits (452), Expect = 3.810e-54
Identity = 86/144 (59.72%), Postives = 115/144 (79.86%), Query Frame = 0

Query:    7 LWSLPPDHIKTLSEQGSVKAYPKNTIIVSEGERSDTLFIILSGKVKVFLADEEGKEVLLSTQGPGEYFGEMILDEGPRSASVMTLEPSRFAVITTAQFKQFLADNPEAGVELVKSLINRVRELTRAVGNLALLDVYGRVARLLL 150
            ++ L PD ++ L+   +++++ KN ++V+EG+R+D+L+IILSGKVKVF+ADEEG EV L TQG GEYFGEM+LDEGPRSAS+MTLEPSRFA+++   F  FLA  P+  + ++K LI+R R LT  V +LALLDVYGRVARLLL
Sbjct:    4 VFGLSPDELEALTRGATIRSFAKNAVVVNEGDRTDSLYIILSGKVKVFVADEEGHEVTLGTQGAGEYFGEMVLDEGPRSASIMTLEPSRFALVSKEAFTAFLASQPDFMLRMIKKLIHRARALTGNVRSLALLDVYGRVARLLL 147

[Close]

BLAST of mRNA_P-wetherbeei_contig56091.1.1 vs. uniprot
Match: A0A1F4BHU1_9PROT (Crp/Fnr family transcriptional regulator n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26 TaxID=1797492 RepID=A0A1F4BHU1_9PROT)

HSP 1 Score: 178 bits (451), Expect = 5.930e-54
Identity = 85/150 (56.67%), Postives = 116/150 (77.33%), Query Frame = 0

Query:    1 IEDSGQLWSLPPDHIKTLSEQGSVKAYPKNTIIVSEGERSDTLFIILSGKVKVFLADEEGKEVLLSTQGPGEYFGEMILDEGPRSASVMTLEPSRFAVITTAQFKQFLADNPEAGVELVKSLINRVRELTRAVGNLALLDVYGRVARLLL 150
            +E +   + L  D ++ +S     +A+P+N ++++EG+R+D+L+IIL+G+VK F+AD +GKEV+LSTQG GEYFGEM+LDEGPRSASVMTLEPS+F V+  A FK FL  NP   V +++ LI+RVR LT  V +LAL+DVYGRVARLLL
Sbjct:    1 MEKAASSFLLTADELRAISAHAQTRAFPRNAVVLNEGDRTDSLYIILAGRVKAFVADTDGKEVVLSTQGAGEYFGEMVLDEGPRSASVMTLEPSKFLVVPKADFKDFLLKNPVFAVRVIEKLIHRVRALTENVKSLALMDVYGRVARLLL 150

[Close]

BLAST of mRNA_P-wetherbeei_contig56091.1.1 vs. uniprot
Match: A0A1F4A0M8_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_64_14 TaxID=1797482 RepID=A0A1F4A0M8_9PROT)

HSP 1 Score: 177 bits (450), Expect = 8.400e-54
Identity = 90/141 (63.83%), Postives = 111/141 (78.72%), Query Frame = 0

Query:   10 LPPDHIKTLSEQGSVKAYPKNTIIVSEGERSDTLFIILSGKVKVFLADEEGKEVLLSTQGPGEYFGEMILDEGPRSASVMTLEPSRFAVITTAQFKQFLADNPEAGVELVKSLINRVRELTRAVGNLALLDVYGRVARLLL 150
            L    ++ LS QG+VK++PK T+IVSEG+ +D+L++ILSG+VKVFLADE GKEV+L TQGPGEYFGEM+LD GPRSASV TLE SRF VI   + ++FL   PE  V L++ LI R R LT +V NLAL+DVYGRVARLLL
Sbjct:   10 LTEAELRALSGQGAVKSFPKQTVIVSEGDETDSLYVILSGRVKVFLADESGKEVVLGTQGPGEYFGEMVLDGGPRSASVETLERSRFVVIPKRKAREFLCGQPEFAVRLIEKLIRRCRVLTASVKNLALMDVYGRVARLLL 150

[Close]

BLAST of mRNA_P-wetherbeei_contig56091.1.1 vs. uniprot
Match: A0A1F4E2F1_9PROT (Crp/Fnr family transcriptional regulator n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13 TaxID=1797495 RepID=A0A1F4E2F1_9PROT)

HSP 1 Score: 176 bits (447), Expect = 2.550e-53
Identity = 87/150 (58.00%), Postives = 117/150 (78.00%), Query Frame = 0

Query:    1 IEDSGQLWSLPPDHIKTLSEQGSVKAYPKNTIIVSEGERSDTLFIILSGKVKVFLADEEGKEVLLSTQGPGEYFGEMILDEGPRSASVMTLEPSRFAVITTAQFKQFLADNPEAGVELVKSLINRVRELTRAVGNLALLDVYGRVARLLL 150
            + DS   + L  + ++ LS +G  +A+PK T+IVSEG+ +D+L+IILSG+VKVFL+D+EG+E++L TQGPGEYFGEM+LD GPRSASVMTLE SRFAVI   +F+ F+  +P   + L++ LI R R LT +V +LAL+DVYGRVARLLL
Sbjct:    4 VSDSA-AFKLREEELRALSREGVARAFPKQTVIVSEGDETDSLYIILSGRVKVFLSDQEGREIVLGTQGPGEYFGEMVLDGGPRSASVMTLEASRFAVIPKNKFRDFVLSHPGFSLHLIEKLIRRTRALTESVKSLALMDVYGRVARLLL 152

[Close]

BLAST of mRNA_P-wetherbeei_contig56091.1.1 vs. uniprot
Match: A0A536X8G8_9PROT (Crp/Fnr family transcriptional regulator n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536X8G8_9PROT)

HSP 1 Score: 172 bits (436), Expect = 1.260e-51
Identity = 82/141 (58.16%), Postives = 114/141 (80.85%), Query Frame = 0

Query:   10 LPPDHIKTLSEQGSVKAYPKNTIIVSEGERSDTLFIILSGKVKVFLADEEGKEVLLSTQGPGEYFGEMILDEGPRSASVMTLEPSRFAVITTAQFKQFLADNPEAGVELVKSLINRVRELTRAVGNLALLDVYGRVARLLL 150
            LPP+ ++  S+   V+++PKNT+I+S+G+R+D+L++ILSG VK F++D  G+E++L T G GEYFGEM+LDEGPRSASV+TLEPSRFA+IT ++ +  LA NP+  + L+ +LI RVR LT  V +LAL+DVYGRVARLLL
Sbjct:   14 LPPEILRAFSQLPIVRSFPKNTVILSQGDRTDSLYVILSGSVKFFVSDVSGRELVLGTAGAGEYFGEMVLDEGPRSASVLTLEPSRFAIITKSEMRDALATNPDFALHLIVNLIRRVRALTENVRSLALMDVYGRVARLLL 154

[Close]

BLAST of mRNA_P-wetherbeei_contig56091.1.1 vs. uniprot
Match: UPI0019CA00C2 (Crp/Fnr family transcriptional regulator n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=UPI0019CA00C2)

HSP 1 Score: 168 bits (425), Expect = 5.170e-50
Identity = 78/150 (52.00%), Postives = 116/150 (77.33%), Query Frame = 0

Query:    1 IEDSGQLWSLPPDHIKTLSEQGSVKAYPKNTIIVSEGERSDTLFIILSGKVKVFLADEEGKEVLLSTQGPGEYFGEMILDEGPRSASVMTLEPSRFAVITTAQFKQFLADNPEAGVELVKSLINRVRELTRAVGNLALLDVYGRVARLLL 150
            + D+     L    ++ L+  G  + + +N+++++EG+ +D+L+IILSGKVKV+LADE GKE++L+T+GPG YFGEM+LD GPRSASVMTLE S F+V+  ++F++FL++NPE  + ++++LI R R LT  V +LALLDVYGRVA+LLL
Sbjct:    1 MTDAPLTLGLTETQLRALAAHGVARTFRQNSVVINEGDETDSLYIILSGKVKVYLADESGKEIVLNTEGPGSYFGEMVLDGGPRSASVMTLEKSTFSVVGKSEFRKFLSENPEVAIHIIENLIARTRALTENVRSLALLDVYGRVAKLLL 150

[Close]

BLAST of mRNA_P-wetherbeei_contig56091.1.1 vs. uniprot
Match: A0A1F3ZWJ6_9PROT (Crp/Fnr family transcriptional regulator n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_64_12 TaxID=1797487 RepID=A0A1F3ZWJ6_9PROT)

HSP 1 Score: 167 bits (422), Expect = 1.160e-49
Identity = 81/141 (57.45%), Postives = 110/141 (78.01%), Query Frame = 0

Query:   10 LPPDHIKTLSEQGSVKAYPKNTIIVSEGERSDTLFIILSGKVKVFLADEEGKEVLLSTQGPGEYFGEMILDEGPRSASVMTLEPSRFAVITTAQFKQFLADNPEAGVELVKSLINRVRELTRAVGNLALLDVYGRVARLLL 150
            L    +  ++ +G V+++PKN+++VSE +R+DTL+IILSG+V+V++ADE GKEV L+ QGPGEYFGEM LDEGPRSASV+T+EPS+F ++  +   +FLA NP   + L++ LI R R LT  V +LALLDVYGRVARLLL
Sbjct:    2 LSEAELGVIARRGVVRSFPKNSVLVSESDRTDTLYIILSGRVRVYVADEHGKEVTLTLQGPGEYFGEMALDEGPRSASVITVEPSKFLIVPKSDVLEFLACNPAFAIHLIRKLIRRSRALTENVKSLALLDVYGRVARLLL 142

[Close]

BLAST of mRNA_P-wetherbeei_contig56091.1.1 vs. uniprot
Match: UPI00166B8066 (Crp/Fnr family transcriptional regulator n=1 Tax=Marinobacterium nitratireducens TaxID=518897 RepID=UPI00166B8066)

HSP 1 Score: 166 bits (420), Expect = 3.140e-49
Identity = 81/142 (57.04%), Postives = 112/142 (78.87%), Query Frame = 0

Query:   10 LPPDHIKTLSEQGSVKAYPKNTIIVSEGERSDTLFIILSGKVKVFLADEEGKEVLLSTQGPGEYFGEM-ILDEGPRSASVMTLEPSRFAVITTAQFKQFLADNPEAGVELVKSLINRVRELTRAVGNLALLDVYGRVARLLL 150
            L P+ +  L+  G  + YPKN ++++EG++SD+L+IIL+GKVKVFL+DE GKEV L+ QGPGEYFGE+ ++D+ PRSASVMTLEPSR AV++ A F++ LA++PE  VEL++ L+ +VR LT AVGN+A+  VY RVA  LL
Sbjct:   11 LSPEDLHILTSNGVTRNYPKNAVLITEGDQSDSLYIILTGKVKVFLSDEHGKEVQLNIQGPGEYFGELALIDQAPRSASVMTLEPSRLAVVSKADFQRCLAEHPEIAVELIRCLVQQVRSLTEAVGNMAMKPVYERVACTLL 152

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig56091.1.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig56091.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A317H9C6_9PROT	4.670e-59	66.20	Crp/Fnr family transcriptional regulator n=1 Tax=P...	[more]
A0A1F4DZQ9_9PROT	1.920e-55	62.50	Crp/Fnr family transcriptional regulator n=1 Tax=B...	[more]
A0A1F4EYP5_9PROT	3.810e-54	59.72	Crp/Fnr family transcriptional regulator n=1 Tax=B...	[more]
A0A1F4BHU1_9PROT	5.930e-54	56.67	Crp/Fnr family transcriptional regulator n=1 Tax=B...	[more]
A0A1F4A0M8_9PROT	8.400e-54	63.83	Uncharacterized protein n=1 Tax=Betaproteobacteria...	[more]
A0A1F4E2F1_9PROT	2.550e-53	58.00	Crp/Fnr family transcriptional regulator n=1 Tax=B...	[more]
A0A536X8G8_9PROT	1.260e-51	58.16	Crp/Fnr family transcriptional regulator n=1 Tax=B...	[more]
UPI0019CA00C2	5.170e-50	52.00	Crp/Fnr family transcriptional regulator n=1 Tax=B...	[more]
A0A1F3ZWJ6_9PROT	1.160e-49	57.45	Crp/Fnr family transcriptional regulator n=1 Tax=B...	[more]
UPI00166B8066	3.140e-49	57.04	Crp/Fnr family transcriptional regulator n=1 Tax=M...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00103	CAMPKINASE	coord: 42..56 score: 19.33 coord: 27..41 score: 17.33 coord: 72..81 score: 49.0 coord: 83..94 score: 38.33
None	No IPR available	PIRSR	PIRSR000548-1	PIRSR000548-1	coord: 23..108 e-value: 9.9E-12 score: 42.5
None	No IPR available	PANTHER	PTHR24567	CRP FAMILY TRANSCRIPTIONAL REGULATORY PROTEIN	coord: 10..150
None	No IPR available	PANTHER	PTHR24567:SF68	CAMP-ACTIVATED GLOBAL TRANSCRIPTIONAL REGULATOR CRP	coord: 10..150
IPR000595	Cyclic nucleotide-binding domain	SMART	SM00100	cnmp_10	coord: 6..123 e-value: 2.3E-20 score: 83.7
IPR000595	Cyclic nucleotide-binding domain	PFAM	PF00027	cNMP_binding	coord: 25..111 e-value: 9.4E-22 score: 76.9
IPR000595	Cyclic nucleotide-binding domain	PROSITE	PS50042	CNMP_BINDING_3	coord: 6..125 score: 20.7876
IPR000595	Cyclic nucleotide-binding domain	CDD	cd00038	CAP_ED	coord: 9..119 e-value: 1.31458E-30 score: 104.715
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10	Jelly Rolls	coord: 11..150 e-value: 8.0E-36 score: 125.9
IPR018490	Cyclic nucleotide-binding-like	SUPERFAMILY	51206	cAMP-binding domain-like	coord: 10..137

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig56091	contig	P-wetherbeei_contig56091:2..451 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig56091.1.1	mRNA_P-wetherbeei_contig56091.1.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig56091 2..451 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig56091.1.1 ID=prot_P-wetherbeei_contig56091.1.1|Name=mRNA_P-wetherbeei_contig56091.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=150bp
IEDSGQLWSLPPDHIKTLSEQGSVKAYPKNTIIVSEGERSDTLFIILSGK
VKVFLADEEGKEVLLSTQGPGEYFGEMILDEGPRSASVMTLEPSRFAVIT
TAQFKQFLADNPEAGVELVKSLINRVRELTRAVGNLALLDVYGRVARLLL

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000595	cNMP-bd_dom
IPR014710	RmlC-like_jellyroll
IPR018490	cNMP-bd-like