prot_P-wetherbeei_contig56055.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig56055.1.1
Unique Nameprot_P-wetherbeei_contig56055.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length173
Homology
BLAST of mRNA_P-wetherbeei_contig56055.1.1 vs. uniprot
Match: A0A6L5FFA3_9HYPH (Signal recognition particle protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FFA3_9HYPH)

HSP 1 Score: 250 bits (639), Expect = 3.610e-78
Identity = 132/173 (76.30%), Postives = 145/173 (83.82%), Query Frame = 0
Query:    1 FHPSRVADRILGMGDIVSLVEKAAQTIDAEKAARTAERMRKGAFDLNDXXXXXXXXXXXXXXXXXXXMLPGVAKMKNQMAAANLDDNLLKRQVAIINSMTPKERRNPDLLKNSRKKRIAAGSGTKAEDINKLLKMHRTMADMMKAMGGGAKRGPMAGLANMMGFGGGMPSPEE 173
            F P+R+A RILGMGDIVSLVEKAA TIDAEKA RTAERMRKGAFDL D                   MLPG+AK+KNQMA ANLDD +LKRQ+AII+SMTPKERRNPDLLK+SRKKRIAAGSGT+AEDINKLLKMHRTM D+MKAMGGG+KRGPMAGLANM+G GGGMPSPE+
Sbjct:  285 FDPARIAGRILGMGDIVSLVEKAAATIDAEKAMRTAERMRKGAFDLTDMREQLAQMQTMGGMAGLMGMLPGIAKLKNQMAGANLDDKVLKRQMAIIDSMTPKERRNPDLLKHSRKKRIAAGSGTRAEDINKLLKMHRTMGDVMKAMGGGSKRGPMAGLANMLGLGGGMPSPEQ 457          
BLAST of mRNA_P-wetherbeei_contig56055.1.1 vs. uniprot
Match: A0A363TK83_9BRAD (Signal recognition particle protein n=1 Tax=Bradyrhizobiaceae bacterium TaxID=2072420 RepID=A0A363TK83_9BRAD)

HSP 1 Score: 248 bits (633), Expect = 2.110e-77
Identity = 147/173 (84.97%), Postives = 159/173 (91.91%), Query Frame = 0
Query:    1 FHPSRVADRILGMGDIVSLVEKAAQTIDAEKAARTAERMRKGAFDLNDXXXXXXXXXXXXXXXXXXXMLPGVAKMKNQMAAANLDDNLLKRQVAIINSMTPKERRNPDLLKNSRKKRIAAGSGTKAEDINKLLKMHRTMADMMKAMGGGAKRGPMAGLANMMGFGGGMPSPEE 173
            FHPSR+ADRILGMGDIVSLVEKAA TIDAEKAAR AERMRKGAFDL D    XXXXXXXXXXXXXX M+PG+AKMKNQ+AAANLDD +LKRQ+AII+SMTP ERRNPD+LK SRKKRIAAGSGT+ ED+NKLLKMHRTMAD+MKAMGGG KRGP+AGLANMMG GGGMPSPEE
Sbjct:  285 FHPSRIADRILGMGDIVSLVEKAAATIDAEKAARVAERMRKGAFDLADLRDQXXXXXXXXXXXXXXGMMPGIAKMKNQIAAANLDDRVLKRQMAIIDSMTPGERRNPDVLKASRKKRIAAGSGTRVEDVNKLLKMHRTMADVMKAMGGG-KRGPLAGLANMMGLGGGMPSPEE 456          
BLAST of mRNA_P-wetherbeei_contig56055.1.1 vs. uniprot
Match: A0A537N239_9PROT (Signal recognition particle protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537N239_9PROT)

HSP 1 Score: 235 bits (600), Expect = 1.850e-75
Identity = 129/173 (74.57%), Postives = 147/173 (84.97%), Query Frame = 0
Query:    1 FHPSRVADRILGMGDIVSLVEKAAQTIDAEKAARTAERMRKGAFDLNDXXXXXXXXXXXXXXXXXXXMLPGVAKMKNQMAAANLDDNLLKRQVAIINSMTPKERRNPDLLKNSRKKRIAAGSGTKAEDINKLLKMHRTMADMMKAMGGGAKRGPMAGLANMMGFGGGMPSPEE 173
            FHP+R+ADRILGMGDIV+LVE+AA TIDAEKAAR AERMRKGAFDL D            XXXXXX MLPG+AKMKNQ+AAANLD+ +LKRQVAII+SMTPKERR+PDLLK SRKKRIAAGSGTK ED+N++LKMHR M+D+MKAM G  KRGPMAGLANM+G G  MP+PE+
Sbjct:   31 FHPARIADRILGMGDIVTLVERAAATIDAEKAARVAERMRKGAFDLLDLREQLVSMQGMGXXXXXXGMLPGIAKMKNQLAAANLDERVLKRQVAIIDSMTPKERRHPDLLKASRKKRIAAGSGTKVEDVNRMLKMHRGMSDVMKAMSGAGKRGPMAGLANMLGLGSAMPTPEQ 203          
BLAST of mRNA_P-wetherbeei_contig56055.1.1 vs. uniprot
Match: A0A1W6ZNX9_9HYPH (Signal recognition particle protein n=1 Tax=Pseudorhodoplanes sinuspersici TaxID=1235591 RepID=A0A1W6ZNX9_9HYPH)

HSP 1 Score: 241 bits (616), Expect = 7.740e-75
Identity = 145/173 (83.82%), Postives = 154/173 (89.02%), Query Frame = 0
Query:    1 FHPSRVADRILGMGDIVSLVEKAAQTIDAEKAARTAERMRKGAFDLNDXXXXXXXXXXXXXXXXXXXMLPGVAKMKNQMAAANLDDNLLKRQVAIINSMTPKERRNPDLLKNSRKKRIAAGSGTKAEDINKLLKMHRTMADMMKAMGGGAKRGPMAGLANMMGFGGGMPSPEE 173
            F P+R+A RILGMGDIVSLVEKAA  IDAEKAARTAERMRKGAFDL D      XXXXXXXXXXXX M+PGVAKMKNQ+AAANLDD+LLKRQ AII+SMTPKERRNPD+LK SRKKRIAAGSGTK E+INKLLKMHR MADMMKAMGG AKRGPMAGLAN +GFGGGMPS EE
Sbjct:  285 FDPARIAGRILGMGDIVSLVEKAAANIDAEKAARTAERMRKGAFDLTDLREQLTXXXXXXXXXXXXGMIPGVAKMKNQLAAANLDDSLLKRQCAIIDSMTPKERRNPDILKASRKKRIAAGSGTKVEEINKLLKMHRGMADMMKAMGG-AKRGPMAGLANALGFGGGMPSAEE 456          
BLAST of mRNA_P-wetherbeei_contig56055.1.1 vs. uniprot
Match: A0A521VRU3_9HYPH (Signal recognition particle protein n=1 Tax=Xanthobacteraceae bacterium TaxID=2021379 RepID=A0A521VRU3_9HYPH)

HSP 1 Score: 237 bits (605), Expect = 4.540e-73
Identity = 142/174 (81.61%), Postives = 155/174 (89.08%), Query Frame = 0
Query:    1 FHPSRVADRILGMGDIVSLVEKAAQTIDAEKAARTAERMRKGAFDLNDXXXXXXXXXXXXXXXXXXXMLPGVAKMKNQMAAANLDDNLLKRQVAIINSMTPKERRNPDLLKNSRKKRIAAGSGTKAEDINKLLKMHRTMADMMKAMGGGA-KRGPMAGLANMMGFGGGMPSPEE 173
            FHPSR+A RILGMGD+VSLVEKAA TIDAEKAAR AERMRKGAFDL+D      XXXXXXXXXXXXX +PGVAK+KNQ+A+ANLDD LLKRQVAII+SMT  ER+NPD+LK SRKKRIA G+G K E+INKLLKMHRTMADMMKAMGG A KRGPMAGLANMMGFGGGMPSPE+
Sbjct:  285 FHPSRIAGRILGMGDVVSLVEKAAATIDAEKAARVAERMRKGAFDLSDLREQLTXXXXXXXXXXXXXXMPGVAKIKNQIASANLDDKLLKRQVAIIDSMTRGERKNPDILKASRKKRIAGGAGVKVEEINKLLKMHRTMADMMKAMGGKAGKRGPMAGLANMMGFGGGMPSPED 458          
BLAST of mRNA_P-wetherbeei_contig56055.1.1 vs. uniprot
Match: A0A327K7G1_9HYPH (Signal recognition particle protein n=2 Tax=Rhodoplanes piscinae TaxID=444923 RepID=A0A327K7G1_9HYPH)

HSP 1 Score: 236 bits (602), Expect = 2.550e-72
Identity = 125/173 (72.25%), Postives = 142/173 (82.08%), Query Frame = 0
Query:    1 FHPSRVADRILGMGDIVSLVEKAAQTIDAEKAARTAERMRKGAFDLNDXXXXXXXXXXXXXXXXXXXMLPGVAKMKNQMAAANLDDNLLKRQVAIINSMTPKERRNPDLLKNSRKKRIAAGSGTKAEDINKLLKMHRTMADMMKAMGGGAKRGPMAGLANMMGFGGGMPSPEE 173
            FHP+R+ADRILGMGDIVSLVEKAA TIDAEKA RTAER+RKG F+L+D                   MLPG+A+MKNQ+AAAN+DD ++KRQ+AII+SMTPKERR PDLLK SRKKRIAAGSGTK E+IN+LLKMHR MADMMK MG G KRGPMAGLAN +GFGGGMPSP+E
Sbjct:  285 FHPARIADRILGMGDIVSLVEKAAATIDAEKARRTAERLRKGQFNLDDLREQLEQMLKMGGLGGMMSMLPGIARMKNQIAAANVDDRIIKRQIAIIHSMTPKERRTPDLLKASRKKRIAAGSGTKVEEINRLLKMHRQMADMMKQMGSG-KRGPMAGLANALGFGGGMPSPQE 456          
BLAST of mRNA_P-wetherbeei_contig56055.1.1 vs. uniprot
Match: A0A537L1T2_9PROT (Signal recognition particle protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537L1T2_9PROT)

HSP 1 Score: 234 bits (596), Expect = 8.870e-72
Identity = 141/173 (81.50%), Postives = 152/173 (87.86%), Query Frame = 0
Query:    1 FHPSRVADRILGMGDIVSLVEKAAQTIDAEKAARTAERMRKGAFDLNDXXXXXXXXXXXXXXXXXXXMLPGVAKMKNQMAAANLDDNLLKRQVAIINSMTPKERRNPDLLKNSRKKRIAAGSGTKAEDINKLLKMHRTMADMMKAMGGGAKRGPMAGLANMMGFGGGMPSPEE 173
            FHPSR+ADRILGMGDIVSLVEKAA TIDAEKAAR AE+MRKGAFDL D    XXXXXXXXXXXXX  MLPGVAKMKNQ+A A LD+ +LKRQ+AII+SMTPKERRNPD+LK SRK+RIA GSGT+ EDIN+LLKMHR MADMMKAM    KRGPMAGLA MMGFGGGMPSPEE
Sbjct:  285 FHPSRIADRILGMGDIVSLVEKAAATIDAEKAARVAEKMRKGAFDLADLRDQXXXXXXXXXXXXXVGMLPGVAKMKNQIANAGLDEKILKRQMAIIDSMTPKERRNPDVLKASRKRRIAEGSGTRPEDINRLLKMHRGMADMMKAMAS-QKRGPMAGLAQMMGFGGGMPSPEE 456          
BLAST of mRNA_P-wetherbeei_contig56055.1.1 vs. uniprot
Match: A0A6N7GRW6_9HYPH (Signal recognition particle protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7GRW6_9HYPH)

HSP 1 Score: 233 bits (593), Expect = 2.060e-71
Identity = 125/175 (71.43%), Postives = 142/175 (81.14%), Query Frame = 0
Query:    1 FHPSRVADRILGMGDIVSLVEKAAQTIDAEKAARTAERMRKGAFDLNDXXXXXXXXXXXXXXXXXXXMLPGVAKMKNQMAAANLDDNLLKRQVAIINSMTPKERRNPDLLKNSRKKRIAAGSGTKAEDINKLLKMHRTMADMMKAMGGGAKRGPMAGLANMMGFGGG--MPSPEE 173
            FHPSR+ADRILGMGDIVSLVEKAAQTIDAE+AARTAERMRKG FDLND                   MLPGVAKMKNQ+A+ANLD+  LKRQ+A I+SMTPKER++PD+LK SRKKRIAAG+G K EDIN++LKMHR MADMMK MG G KRGPMAG+ANM+G GGG  MP+PE+
Sbjct:  285 FHPSRIADRILGMGDIVSLVEKAAQTIDAERAARTAERMRKGQFDLNDLRDQLIGMQQMGGMTGLMGMLPGVAKMKNQLASANLDERFLKRQMAAIDSMTPKERKSPDILKASRKKRIAAGAGVKVEDINRMLKMHRQMADMMKVMGSG-KRGPMAGIANMLGLGGGAPMPTPEQ 458          
BLAST of mRNA_P-wetherbeei_contig56055.1.1 vs. uniprot
Match: A0A1W9IDE0_9PROT (Signal recognition particle protein n=1 Tax=Proteobacteria bacterium SG_bin9 TaxID=1827385 RepID=A0A1W9IDE0_9PROT)

HSP 1 Score: 232 bits (591), Expect = 4.180e-71
Identity = 133/173 (76.88%), Postives = 151/173 (87.28%), Query Frame = 0
Query:    1 FHPSRVADRILGMGDIVSLVEKAAQTIDAEKAARTAERMRKGAFDLNDXXXXXXXXXXXXXXXXXXXMLPGVAKMKNQMAAANLDDNLLKRQVAIINSMTPKERRNPDLLKNSRKKRIAAGSGTKAEDINKLLKMHRTMADMMKAMGGGAKRGPMAGLANMMGFGGGMPSPEE 173
            FHPSR+A RILGMGD+VSLVEKAA  IDAEKAARTAERMRKG FDL+D       XXXXXXXXXX  M+PG+AKMKNQ+AAANLDD ++KRQVA+I+SMT +ER+NPD+LK SRKKRIAAG+G K E++NKLLKMHR MADMMKAMGG AKRGPMAGLA  MGFGGGMPSP++
Sbjct:  285 FHPSRIAGRILGMGDVVSLVEKAAAHIDAEKAARTAERMRKGQFDLSDMREQLMQXXXXXXXXXXLGMMPGIAKMKNQIAAANLDDKVVKRQVAVIDSMTRQERKNPDILKASRKKRIAAGAGLKVEEVNKLLKMHRNMADMMKAMGG-AKRGPMAGLAQAMGFGGGMPSPDQ 456          
BLAST of mRNA_P-wetherbeei_contig56055.1.1 vs. uniprot
Match: W3RKJ3_9BRAD (Signal recognition particle protein n=1 Tax=Afipia sp. P52-10 TaxID=1429916 RepID=W3RKJ3_9BRAD)

HSP 1 Score: 230 bits (587), Expect = 1.990e-70
Identity = 142/173 (82.08%), Postives = 156/173 (90.17%), Query Frame = 0
Query:    1 FHPSRVADRILGMGDIVSLVEKAAQTIDAEKAARTAERMRKGAFDLNDXXXXXXXXXXXXXXXXXXXMLPGVAKMKNQMAAANLDDNLLKRQVAIINSMTPKERRNPDLLKNSRKKRIAAGSGTKAEDINKLLKMHRTMADMMKAMGGGAKRGPMAGLANMMGFGGGMPSPEE 173
            FHP R+A RILGMGD+VSLVEKAA  IDAEKAAR AE+MRKG FDL  XXXXXXXXXXXXXXXXXXXMLPG+AKMKNQ+A+ANLDD +LKRQ+A+I+SMT +ERRNPDLLKNSRKKRI+AGSG K E+INKLLKMHR MADMMKAMG G KRGPMA L NMMGFGGGMPSPE+
Sbjct:  285 FHPGRIAGRILGMGDVVSLVEKAAANIDAEKAARVAEKMRKGKFDLAXXXXXXXXXXXXXXXXXXXXMLPGIAKMKNQLASANLDDKILKRQIAVIDSMTREERRNPDLLKNSRKKRISAGSGVKVEEINKLLKMHRNMADMMKAMGQG-KRGPMAALGNMMGFGGGMPSPEQ 456          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig56055.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6L5FFA3_9HYPH3.610e-7876.30Signal recognition particle protein n=1 Tax=Hyphom... [more]
A0A363TK83_9BRAD2.110e-7784.97Signal recognition particle protein n=1 Tax=Bradyr... [more]
A0A537N239_9PROT1.850e-7574.57Signal recognition particle protein (Fragment) n=1... [more]
A0A1W6ZNX9_9HYPH7.740e-7583.82Signal recognition particle protein n=1 Tax=Pseudo... [more]
A0A521VRU3_9HYPH4.540e-7381.61Signal recognition particle protein n=1 Tax=Xantho... [more]
A0A327K7G1_9HYPH2.550e-7272.25Signal recognition particle protein n=2 Tax=Rhodop... [more]
A0A537L1T2_9PROT8.870e-7281.50Signal recognition particle protein n=1 Tax=Alphap... [more]
A0A6N7GRW6_9HYPH2.060e-7171.43Signal recognition particle protein n=1 Tax=Hyphom... [more]
A0A1W9IDE0_9PROT4.180e-7176.88Signal recognition particle protein n=1 Tax=Proteo... [more]
W3RKJ3_9BRAD1.990e-7082.08Signal recognition particle protein n=1 Tax=Afipia... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036891Signal recognition particle, SRP54 subunit, M-domain superfamilyGENE3D1.10.260.30coord: 26..163
e-value: 1.2E-40
score: 140.7
IPR036891Signal recognition particle, SRP54 subunit, M-domain superfamilySUPERFAMILY47446Signal peptide-binding domaincoord: 14..147
IPR004125Signal recognition particle, SRP54 subunit, M-domainPFAMPF02978SRP_SPBcoord: 44..143
e-value: 4.3E-33
score: 114.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 104..123
IPR004780Signal recognition particle proteinPANTHERPTHR11564:SF7SIGNAL RECOGNITION PARTICLE 54 KDA PROTEIN, CHLOROPLASTICcoord: 1..154
IPR022941Signal recognition particle, SRP54 subunitPANTHERPTHR11564SIGNAL RECOGNITION PARTICLE 54K PROTEIN SRP54coord: 1..154

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig56055contigP-wetherbeei_contig56055:2..520 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig56055.1.1mRNA_P-wetherbeei_contig56055.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig56055 2..520 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig56055.1.1 ID=prot_P-wetherbeei_contig56055.1.1|Name=mRNA_P-wetherbeei_contig56055.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=173bp
FHPSRVADRILGMGDIVSLVEKAAQTIDAEKAARTAERMRKGAFDLNDLR
DQLQQMQSMGGLGGLMGMLPGVAKMKNQMAAANLDDNLLKRQVAIINSMT
PKERRNPDLLKNSRKKRIAAGSGTKAEDINKLLKMHRTMADMMKAMGGGA
KRGPMAGLANMMGFGGGMPSPEE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036891Signal_recog_part_SRP54_M_sf
IPR004125Signal_recog_particle_SRP54_M
IPR004780SRP
IPR022941SRP54