prot_P-wetherbeei_contig56020.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig56020.1.1
Unique Nameprot_P-wetherbeei_contig56020.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length59
Homology
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BLAST of mRNA_P-wetherbeei_contig56020.1.1 vs. uniprot
Match: UPI001BACAACE (hypothetical protein n=1 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=UPI001BACAACE)

HSP 1 Score: 78.2 bits (191), Expect = 1.130e-17
Identity = 43/62 (69.35%), Postives = 48/62 (77.42%), Query Frame = 0 
Query:    2 VRHPGGSIDIATYARIAHRERDAAIAAAVRQTAGSIRALWSAIWRGLG----RSGRTRLNAP 59
            +RHP GS DIA Y RIAHRERDAA+ AAV+ TA S+RA+WSAIWR LG    RSGR R NAP
Sbjct:   18 LRHPDGSPDIAAYGRIAHRERDAAVLAAVQDTARSLRAMWSAIWRVLGGSSGRSGRIRSNAP 79
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig56020.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI001BACAACE1.130e-1769.35hypothetical protein n=1 Tax=unclassified Bradyrhi... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig56020contigP-wetherbeei_contig56020:87..263 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig56020.1.1mRNA_P-wetherbeei_contig56020.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig56020 87..263 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig56020.1.1 ID=prot_P-wetherbeei_contig56020.1.1|Name=mRNA_P-wetherbeei_contig56020.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=59bp
VVRHPGGSIDIATYARIAHRERDAAIAAAVRQTAGSIRALWSAIWRGLGR
SGRTRLNAP
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