prot_P-wetherbeei_contig5600.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig5600.1.1
Unique Nameprot_P-wetherbeei_contig5600.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length605
Homology
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BLAST of mRNA_P-wetherbeei_contig5600.1.1 vs. uniprot
Match: A0A6P6H3Z2_PUMCO (KICSTOR complex protein kaptin n=1 Tax=Puma concolor TaxID=9696 RepID=A0A6P6H3Z2_PUMCO)

HSP 1 Score: 57.0 bits (136), Expect = 6.140e-5
Identity = 43/124 (34.68%), Postives = 61/124 (49.19%), Query Frame = 0 
Query:  180 ENPAARTAANNVDGGTG-----QEDVALLICGGDGRVHVFVRHGGVGNFVEHTDGGRGRRRLFPELLDLGAPVSCIAVRR--DGPRRLVAVGCVDGLVRLARVEYRRRRQPALEVTEIRFEGPV 296
            E+PA R  +  V GG G     Q D   L+ G D  +H++  + G+  F EH         LFPEL +L + V  + V       RRL A+GC  G VR+A V+  +R Q  L+   I  +GP+
Sbjct:   68 EHPAVRVVSGVV-GGVGVQVGNQLDTVFLLSGNDPAIHLYKENEGLHQFEEHPV-----ENLFPELTNLTSSVLWLDVHNLPGTSRRLSALGCQSGYVRVAHVD--QRSQEVLQTWTILQDGPI 183
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BLAST of mRNA_P-wetherbeei_contig5600.1.1 vs. uniprot
Match: D8LBM9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBM9_ECTSI)

HSP 1 Score: 57.4 bits (137), Expect = 6.870e-5
Identity = 29/58 (50.00%), Postives = 36/58 (62.07%), Query Frame = 0 
Query:  542 VTCCWSRRLPYPVCSLAAADLDSDGRRELVVITQYGVHVLRRDPTDDARRVAERLDAL 599
            +T  W R LP+ V  +A  D + DG RELVV TQYGVHV R D   +A R A+ + AL
Sbjct:  571 LTARWQRDLPHGVLRIAFGDFNHDGVRELVVATQYGVHVFRPDYRAEASRFAKTMHAL 628
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5600.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6P6H3Z2_PUMCO6.140e-534.68KICSTOR complex protein kaptin n=1 Tax=Puma concol... [more]
D8LBM9_ECTSI6.870e-550.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 201..521
e-value: 2.4E-5
score: 25.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 75..102
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 144..192
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 155..169
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 75..98
IPR029982KaptinPANTHERPTHR15435KICSTOR COMPLEX PROTEIN KAPTINcoord: 196..299
coord: 396..598
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 202..417

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5600contigP-wetherbeei_contig5600:394..2208 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5600.1.1mRNA_P-wetherbeei_contig5600.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig5600 178..2241 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig5600.1.1 ID=prot_P-wetherbeei_contig5600.1.1|Name=mRNA_P-wetherbeei_contig5600.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=605bp
MEPFLTRSPFSRRLLIVNGSNLSVLEDEEREGAYRFELLRCVQHSMELLG
CHAMVLPEGRKMVLCLTLRTDLQNTERPGSSNPSRGHPARSQSRHRTAAP
NPAWLHIYEGNGDSIRFSFPPAHAFQQFELSFLPLSLTDAPIWHDAPASG
SDAPNDAGNHGSDGNSGAEGDDSNDARLRENPAARTAANNVDGGTGQEDV
ALLICGGDGRVHVFVRHGGVGNFVEHTDGGRGRRRLFPELLDLGAPVSCI
AVRRDGPRRLVAVGCVDGLVRLARVEYRRRRQPALEVTEIRFEGPVVSIE
WTTPESALCVTCLGLVCRLDFRPTVSCPAGKAGIFYTGCGSSGDYAAAEA
GGKRTRHPVRAAGRAMLLPSLEPGNSVTCALLYGGDGGRIGRKSESNPQV
IVGTFHGDLSLWDLGSAADPSWHDVWAEEAAPATTHANELLALTAYSGGP
PSAPLAENGQHPLAPEETRHDRALLAVHAAGDVVIAGQDTGEAAAAAAAA
PSSASATHPAATAAAAVAAAPSAAAAIPTAGGRERRSGMNPVTCCWSRRL
PYPVCSLAAADLDSDGRRELVVITQYGVHVLRRDPTDDARRVAERLDALL
AGTC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR029982Kptn
IPR036322WD40_repeat_dom_sf