prot_P-wetherbeei_contig55902.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig55902.1.1
Unique Nameprot_P-wetherbeei_contig55902.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length51
Homology
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BLAST of mRNA_P-wetherbeei_contig55902.1.1 vs. uniprot
Match: D7G3J8_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3J8_ECTSI)

HSP 1 Score: 50.1 bits (118), Expect = 1.070e-5
Identity = 26/51 (50.98%), Postives = 38/51 (74.51%), Query Frame = 0 
Query:    1 EAQAVLGSAVAIQEKALAPDHPAVASSLLPLSEIYRKQGRLEDAEKLFKRA 51
            +A+ ++  AV IQ + L   HPAVASS+  ++E+YR+QGRL +AE LF+RA
Sbjct:  545 KAEEMIKRAVLIQGRHLGLRHPAVASSMRAMAELYRRQGRLAEAEPLFRRA 595
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BLAST of mRNA_P-wetherbeei_contig55902.1.1 vs. uniprot
Match: A0A8C2EF25_CYPCA (Kinesin light chain n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C2EF25_CYPCA)

HSP 1 Score: 47.4 bits (111), Expect = 9.530e-5
Identity = 26/51 (50.98%), Postives = 37/51 (72.55%), Query Frame = 0 
Query:    1 EAQAVLGSAVAIQEKALAPDHPAVASSLLPLSEIYRKQGRLEDAEKLFKRA 51
            EA  +L  A+AI+EK L  DHPAVA++L  L+ +Y K+G+ ++AE L KRA
Sbjct:   17 EAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKHKEAEPLCKRA 67
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig55902.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G3J8_ECTSI1.070e-550.98TPR repeat-containing protein n=1 Tax=Ectocarpus s... [more]
A0A8C2EF25_CYPCA9.530e-550.98Kinesin light chain n=1 Tax=Cyprinus carpio TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13424TPR_12coord: 1..51
e-value: 2.8E-10
score: 40.3
NoneNo IPR availablePROSITEPS50293TPR_REGIONcoord: 25..51
score: 9.496367
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..51
e-value: 1.8E-13
score: 52.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 1..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig55902contigP-wetherbeei_contig55902:12..164 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig55902.1.1mRNA_P-wetherbeei_contig55902.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig55902 12..164 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig55902.1.1 ID=prot_P-wetherbeei_contig55902.1.1|Name=mRNA_P-wetherbeei_contig55902.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=51bp
EAQAVLGSAVAIQEKALAPDHPAVASSLLPLSEIYRKQGRLEDAEKLFKR
A
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf