prot_P-wetherbeei_contig55723.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig55723.1.1
Unique Nameprot_P-wetherbeei_contig55723.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length76
Homology
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BLAST of mRNA_P-wetherbeei_contig55723.1.1 vs. uniprot
Match: UPI001C026CE3 (hypothetical protein n=3 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=UPI001C026CE3)

HSP 1 Score: 68.2 bits (165), Expect = 1.690e-13
Identity = 39/53 (73.58%), Postives = 43/53 (81.13%), Query Frame = 0 
Query:    1 MLKTISAALLAASVLVVAPAMAHGPGRTAHGA-TVYVQPGVFDAHARMGRHHH 52
            MLKTISAALLAASVL VAPAMAHGP RT H   +VYV P V +++A MGRHHH
Sbjct:    1 MLKTISAALLAASVLAVAPAMAHGPDRTGHVPDSVYVNPDVLNSNAWMGRHHH 53
[Close]
BLAST of mRNA_P-wetherbeei_contig55723.1.1 vs. uniprot
Match: UPI001BA9BC25 (hypothetical protein n=3 Tax=Bradyrhizobium TaxID=374 RepID=UPI001BA9BC25)

HSP 1 Score: 48.9 bits (115), Expect = 8.780e-6
Identity = 32/54 (59.26%), Postives = 36/54 (66.67%), Query Frame = 0 
Query:    1 MLKTISAALLAASVLVVAPAMAHGPGRTAHGATVYVQPGV--FDAHARMGRHHH 52
            M KTISAALLA SVL  APA+A  PG+T H      Q     F+A+ARMGRHHH
Sbjct:    1 MFKTISAALLAVSVLA-APALAGSPGKTMHAPIRAEQANANFFNANARMGRHHH 53
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig55723.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
UPI001C026CE31.690e-1373.58hypothetical protein n=3 Tax=unclassified Bradyrhi... [more]
UPI001BA9BC258.780e-659.26hypothetical protein n=3 Tax=Bradyrhizobium TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig55723contigP-wetherbeei_contig55723:83..310 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig55723.1.1mRNA_P-wetherbeei_contig55723.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig55723 83..337 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig55723.1.1 ID=prot_P-wetherbeei_contig55723.1.1|Name=mRNA_P-wetherbeei_contig55723.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=76bp
MLKTISAALLAASVLVVAPAMAHGPGRTAHGATVYVQPGVFDAHARMGRH
HHYRHHHHRHHHKHFRHHHRFHGHH*
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