prot_P-wetherbeei_contig5542.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig5542.1.1
Unique Nameprot_P-wetherbeei_contig5542.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length521
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5542.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001138Zn(2)-C6 fungal-type DNA-binding domainSMARTSM00066gal4_2coord: 6..52
e-value: 1.8E-4
score: 30.8
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPFAMPF00172Zn_cluscoord: 12..48
e-value: 2.2E-5
score: 24.5
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS00463ZN2_CY6_FUNGAL_1coord: 11..41
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS50048ZN2_CY6_FUNGAL_2coord: 11..41
score: 9.193
IPR001138Zn(2)-C6 fungal-type DNA-binding domainCDDcd00067GAL4coord: 9..42
e-value: 1.63442E-6
score: 42.6506
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilyGENE3D4.10.240.10coord: 8..72
e-value: 1.2E-6
score: 30.5
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 10..50
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..113
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..70
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 136..158
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 114..130
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..159

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5542contigP-wetherbeei_contig5542:949..2751 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5542.1.1mRNA_P-wetherbeei_contig5542.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig5542 160..3019 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig5542.1.1 ID=prot_P-wetherbeei_contig5542.1.1|Name=mRNA_P-wetherbeei_contig5542.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=521bp
MKEQGEGEKRTCTRCRGAKVRCERVLQGATCGRCVRLGLECEPQTRKRGR
PKTRPGGTNEDPERLSSRRTQHPELGGGRVSLRVKRRRDVSSSPSTPLSL
SEDSDGNNSEDSESVSPPPPPPPPCAKRPITAAPPKRRQNHKEEEREEHD
RAPAMKEDRPVDGFVPASPCPPARVVPATSAALNYPPPSPVDFTYYDAIF
FPCNVKGAAAAGAAVPIPYQQHQHHQDGGGRRSVPATRHLGQGGGGVMAT
AAVPPPPRATTVNALAAERLRHAGRDQLKHANGRFAAGAAADGHGNGSVG
GGSGGRTWPIGIEWHEDERHGARPVPALLQEVNWRGDGIGGVNAGITIGR
YSNAPSRPSFPQSSAYVQTGASGLVVASRAACLPPQGHSVQPPPPTYLRE
KSFASELLNAGYVPPLAQHMHAYSRGDQLGVTGGNNGYSRDGGYGNATGG
GYGCGGGHSGGCGPQRQLHQQQPHRHRQASPAMALVDANGAVMPADALTA
WNLLDSLGHLDFAGLAASTG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001138Zn2-C6_fun-type_DNA-bd
IPR036864Zn2-C6_fun-type_DNA-bd_sf