prot_P-wetherbeei_contig55416.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig55416.1.1
Unique Nameprot_P-wetherbeei_contig55416.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length47
Homology
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BLAST of mRNA_P-wetherbeei_contig55416.1.1 vs. uniprot
Match: W3RJT5_9BRAD (Uncharacterized protein n=1 Tax=Afipia sp. P52-10 TaxID=1429916 RepID=W3RJT5_9BRAD)

HSP 1 Score: 60.5 bits (145), Expect = 6.370e-11
Identity = 33/47 (70.21%), Postives = 37/47 (78.72%), Query Frame = 0 
Query:    1 RGKRRP-DSDKAENAQKMTKERERAYKNALKSIPDGKTDNDPWKGAR 46
            RG+RR  ++DK EN QK +KERE AYKNALKSIPD K D DPWK AR
Sbjct:   33 RGQRRAANADKTENTQKASKEREDAYKNALKSIPDAKQDKDPWKDAR 79
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig55416.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
W3RJT5_9BRAD6.370e-1170.21Uncharacterized protein n=1 Tax=Afipia sp. P52-10 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..46
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig55416contigP-wetherbeei_contig55416:1..141 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig55416.1.1mRNA_P-wetherbeei_contig55416.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig55416 1..141 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig55416.1.1 ID=prot_P-wetherbeei_contig55416.1.1|Name=mRNA_P-wetherbeei_contig55416.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=47bp
RGKRRPDSDKAENAQKMTKERERAYKNALKSIPDGKTDNDPWKGAR*
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