prot_P-wetherbeei_contig55258.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig55258.1.1
Unique Name	prot_P-wetherbeei_contig55258.1.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	172

Homology

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BLAST of mRNA_P-wetherbeei_contig55258.1.1 vs. uniprot
Match: A0A140GUT4_9HYPH (Translation initiation factor IF-2 n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A140GUT4_9HYPH)

HSP 1 Score: 296 bits (759), Expect = 1.500e-92
Identity = 155/172 (90.12%), Postives = 163/172 (94.77%), Query Frame = 0

Query:    1 DTAQRIAEELGHTVKRVAEADVEEGVFDAADNPAEMTPRAAVVTVMGHVDHGKTSLLDAIRSTNVVSGEAGGITQHIGAYQVDSPSHGKITFIDTPGHAAFTAMRARGAKVTDIVVLVVAADDGVMPQTIEAINHAKAAKVPMIVAINKIDKTDSKPERVRSELLQHEVQVE 172
            DTAQ IAEELGHTVKRVAEADVEEGVFD AD+P ++ PRA VVTVMGHVDHGKTSLLDAIR TNVVSGEAGGITQHIGAYQVDSPSHGKITFIDTPGHAAFTAMRARGAKVTDIVVLVVAADDGVMPQTIEAINHAKAAKVPMIVAINK+DK D+ P RVR++LLQ+EVQVE
Sbjct:  356 DTAQLIAEELGHTVKRVAEADVEEGVFDVADDPDDLEPRAPVVTVMGHVDHGKTSLLDAIRQTNVVSGEAGGITQHIGAYQVDSPSHGKITFIDTPGHAAFTAMRARGAKVTDIVVLVVAADDGVMPQTIEAINHAKAAKVPMIVAINKMDKPDANPMRVRTDLLQYEVQVE 527

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BLAST of mRNA_P-wetherbeei_contig55258.1.1 vs. uniprot
Match: A0A1W6ZPB3_9HYPH (Translation initiation factor IF-2 n=1 Tax=Pseudorhodoplanes sinuspersici TaxID=1235591 RepID=A0A1W6ZPB3_9HYPH)

HSP 1 Score: 295 bits (756), Expect = 2.580e-92
Identity = 153/172 (88.95%), Postives = 163/172 (94.77%), Query Frame = 0

Query:    1 DTAQRIAEELGHTVKRVAEADVEEGVFDAADNPAEMTPRAAVVTVMGHVDHGKTSLLDAIRSTNVVSGEAGGITQHIGAYQVDSPSHGKITFIDTPGHAAFTAMRARGAKVTDIVVLVVAADDGVMPQTIEAINHAKAAKVPMIVAINKIDKTDSKPERVRSELLQHEVQVE 172
            DTAQ IAEELGHTVKRVAE+DVEEG+FD AD+P  +T RA VVT+MGHVDHGKTSLLDAIRS NVVSGEAGGITQHIGAYQV+SPSHGKITFIDTPGHAAFTAMRARGAKVTDIV+LVVAADDGVMPQTIEAI HAKAAKVPMIVAINKIDK D+KP+RVR+ELLQHEVQVE
Sbjct:  329 DTAQLIAEELGHTVKRVAESDVEEGLFDTADDPDTLTSRAPVVTIMGHVDHGKTSLLDAIRSANVVSGEAGGITQHIGAYQVESPSHGKITFIDTPGHAAFTAMRARGAKVTDIVILVVAADDGVMPQTIEAIQHAKAAKVPMIVAINKIDKPDAKPDRVRTELLQHEVQVE 500

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BLAST of mRNA_P-wetherbeei_contig55258.1.1 vs. uniprot
Match: J9DD25_9RHOB (Translation initiation factor IF-2 n=2 Tax=Rhodovulum sp. PH10 TaxID=1187851 RepID=J9DD25_9RHOB)

HSP 1 Score: 289 bits (739), Expect = 4.930e-92
Identity = 150/172 (87.21%), Postives = 160/172 (93.02%), Query Frame = 0

Query:    1 DTAQRIAEELGHTVKRVAEADVEEGVFDAADNPAEMTPRAAVVTVMGHVDHGKTSLLDAIRSTNVVSGEAGGITQHIGAYQVDSPSHGKITFIDTPGHAAFTAMRARGAKVTDIVVLVVAADDGVMPQTIEAINHAKAAKVPMIVAINKIDKTDSKPERVRSELLQHEVQVE 172
            DTAQ IAEELGHTVKRV+EADVEEG+FD AD+P ++ PR AVVT+MGHVDHGKTSLLDAIR  NVVSGEAGGITQHIGAYQV +PS  KITFIDTPGHAAFTAMRARGAKVTD+VVLVVAADDGVMPQTIEAI HAKAAKVPMIVAINKIDK D+KPERVR+ELLQHEVQVE
Sbjct:   83 DTAQLIAEELGHTVKRVSEADVEEGLFDVADDPVDLEPRPAVVTIMGHVDHGKTSLLDAIRHANVVSGEAGGITQHIGAYQVTAPSGSKITFIDTPGHAAFTAMRARGAKVTDVVVLVVAADDGVMPQTIEAIQHAKAAKVPMIVAINKIDKPDAKPERVRTELLQHEVQVE 254

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BLAST of mRNA_P-wetherbeei_contig55258.1.1 vs. uniprot
Match: A0A537NMY0_9PROT (Translation initiation factor IF-2 (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537NMY0_9PROT)

HSP 1 Score: 286 bits (731), Expect = 1.680e-91
Identity = 147/172 (85.47%), Postives = 160/172 (93.02%), Query Frame = 0

Query:    1 DTAQRIAEELGHTVKRVAEADVEEGVFDAADNPAEMTPRAAVVTVMGHVDHGKTSLLDAIRSTNVVSGEAGGITQHIGAYQVDSPSHGKITFIDTPGHAAFTAMRARGAKVTDIVVLVVAADDGVMPQTIEAINHAKAAKVPMIVAINKIDKTDSKPERVRSELLQHEVQVE 172
            DTAQ +AEELGHTVKRVAE+DVEEG+FDAAD+P+ + PR  VVTVMGHVDHGKTSLLDAIRST V +GEAGGITQHIGAYQV +PS  KITFIDTPGHAAFTAMRARGAKVTDIVVLVVAADDGVMPQT+EAINHAKAAK PMIVAINKID+ D+KPERVR+ELLQHE+QVE
Sbjct:   23 DTAQLLAEELGHTVKRVAESDVEEGLFDAADDPSALVPRPPVVTVMGHVDHGKTSLLDAIRSTEVAAGEAGGITQHIGAYQVTAPSGNKITFIDTPGHAAFTAMRARGAKVTDIVVLVVAADDGVMPQTVEAINHAKAAKAPMIVAINKIDRPDAKPERVRNELLQHEIQVE 194

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BLAST of mRNA_P-wetherbeei_contig55258.1.1 vs. uniprot
Match: A0A537SUC7_9PROT (GTP-binding protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537SUC7_9PROT)

HSP 1 Score: 283 bits (724), Expect = 1.380e-90
Identity = 146/172 (84.88%), Postives = 160/172 (93.02%), Query Frame = 0

Query:    1 DTAQRIAEELGHTVKRVAEADVEEGVFDAADNPAEMTPRAAVVTVMGHVDHGKTSLLDAIRSTNVVSGEAGGITQHIGAYQVDSPSHGKITFIDTPGHAAFTAMRARGAKVTDIVVLVVAADDGVMPQTIEAINHAKAAKVPMIVAINKIDKTDSKPERVRSELLQHEVQVE 172
            DTAQ +AEELGHTVKRVAE+DVEEG+FD AD+P  + PR  VVTVMGHVDHGKTSLLDAIRST+V +GEAGGITQHIGAYQV +PS  KITFIDTPGHAAF+AMRARGA+VTDIVVLVVAADDGVMPQT+EAINHAKAAKVPMIVAINKID+ D+KPERVR+ELLQHEVQVE
Sbjct:  307 DTAQLLAEELGHTVKRVAESDVEEGLFDVADDPDSLVPRPPVVTVMGHVDHGKTSLLDAIRSTDVAAGEAGGITQHIGAYQVTAPSGNKITFIDTPGHAAFSAMRARGARVTDIVVLVVAADDGVMPQTVEAINHAKAAKVPMIVAINKIDRPDAKPERVRTELLQHEVQVE 478

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BLAST of mRNA_P-wetherbeei_contig55258.1.1 vs. uniprot
Match: A0A521VRB7_9HYPH (Translation initiation factor IF-2 n=1 Tax=Xanthobacteraceae bacterium TaxID=2021379 RepID=A0A521VRB7_9HYPH)

HSP 1 Score: 288 bits (737), Expect = 1.610e-89
Identity = 150/172 (87.21%), Postives = 161/172 (93.60%), Query Frame = 0

Query:    1 DTAQRIAEELGHTVKRVAEADVEEGVFDAADNPAEMTPRAAVVTVMGHVDHGKTSLLDAIRSTNVVSGEAGGITQHIGAYQVDSPSHGKITFIDTPGHAAFTAMRARGAKVTDIVVLVVAADDGVMPQTIEAINHAKAAKVPMIVAINKIDKTDSKPERVRSELLQHEVQVE 172
            DTAQ IAEE+GHTVKRVAE+DVEEG+FD AD+PA++ PR  VVTVMGHVDHGKTSLLDAIR+ NVVSGEAGGITQHIGAYQV S   GKITFIDTPGHAAF+AMRARGAKVTDIV+LVVAADDGVMPQTIEAINHAKAAKVPMIVAINKIDK D+KPERVR+ELLQHEVQVE
Sbjct:  331 DTAQLIAEEMGHTVKRVAESDVEEGLFDTADDPAKVQPRPPVVTVMGHVDHGKTSLLDAIRAANVVSGEAGGITQHIGAYQVTSSQGGKITFIDTPGHAAFSAMRARGAKVTDIVILVVAADDGVMPQTIEAINHAKAAKVPMIVAINKIDKADAKPERVRTELLQHEVQVE 502

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BLAST of mRNA_P-wetherbeei_contig55258.1.1 vs. uniprot
Match: W3RP57_9BRAD (Translation initiation factor IF-2 n=1 Tax=Afipia sp. P52-10 TaxID=1429916 RepID=W3RP57_9BRAD)

HSP 1 Score: 288 bits (737), Expect = 1.750e-89
Identity = 151/173 (87.28%), Postives = 164/173 (94.80%), Query Frame = 0

Query:    1 DTAQRIAEELGHTVKRVAEADVEEGVFDAADNPA-EMTPRAAVVTVMGHVDHGKTSLLDAIRSTNVVSGEAGGITQHIGAYQVDSPSHGKITFIDTPGHAAFTAMRARGAKVTDIVVLVVAADDGVMPQTIEAINHAKAAKVPMIVAINKIDKTDSKPERVRSELLQHEVQVE 172
            DTAQ +AEELGHTVKRVAE+DVEEG+FD AD+ A + TPR+ VVTVMGHVDHGKTSLLDA+RS NVVSGEAGGITQHIGAYQV++P+ GKITFIDTPGHAAFTAMRARGAKVTDIVVLVVAADDGVMPQT+EAINHAKAAKVPMIVAINKIDK D+KPERVR+ELLQHEVQVE
Sbjct:  335 DTAQLVAEELGHTVKRVAESDVEEGLFDVADDHATDTTPRSPVVTVMGHVDHGKTSLLDALRSANVVSGEAGGITQHIGAYQVNAPNGGKITFIDTPGHAAFTAMRARGAKVTDIVVLVVAADDGVMPQTVEAINHAKAAKVPMIVAINKIDKADAKPERVRTELLQHEVQVE 507

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BLAST of mRNA_P-wetherbeei_contig55258.1.1 vs. uniprot
Match: A0A1M3CLZ3_9BRAD (Translation initiation factor IF-2 (Fragment) n=2 Tax=Bradyrhizobiaceae TaxID=41294 RepID=A0A1M3CLZ3_9BRAD)

HSP 1 Score: 278 bits (712), Expect = 7.450e-89
Identity = 145/172 (84.30%), Postives = 156/172 (90.70%), Query Frame = 0

Query:    1 DTAQRIAEELGHTVKRVAEADVEEGVFDAADNPAEMTPRAAVVTVMGHVDHGKTSLLDAIRSTNVVSGEAGGITQHIGAYQVDSPSHGKITFIDTPGHAAFTAMRARGAKVTDIVVLVVAADDGVMPQTIEAINHAKAAKVPMIVAINKIDKTDSKPERVRSELLQHEVQVE 172
            DTAQ IAEELGHTVKRVA +DVEEG+FD  D+  +  PR+ VVTVMGHVDHGKTSLLDA+R  NVVSGEAGGITQHIGAYQV SP   KITFIDTPGHAAFTAMRARGAKVTDIV+LVVAADDGVMPQTIEAINHAKAAKVPMI+AINKIDK D++PERVR+ELLQHEVQVE
Sbjct:    5 DTAQLIAEELGHTVKRVAASDVEEGLFDVVDDSTDTEPRSPVVTVMGHVDHGKTSLLDALRHANVVSGEAGGITQHIGAYQVASPDGKKITFIDTPGHAAFTAMRARGAKVTDIVILVVAADDGVMPQTIEAINHAKAAKVPMIIAINKIDKPDARPERVRTELLQHEVQVE 176

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BLAST of mRNA_P-wetherbeei_contig55258.1.1 vs. uniprot
Match: A0A833GFJ5_9HYPH (Translation initiation factor IF-2 n=1 Tax=Pseudorhodoplanes sp. TaxID=1934341 RepID=A0A833GFJ5_9HYPH)

HSP 1 Score: 285 bits (730), Expect = 1.430e-88
Identity = 145/172 (84.30%), Postives = 160/172 (93.02%), Query Frame = 0

Query:    1 DTAQRIAEELGHTVKRVAEADVEEGVFDAADNPAEMTPRAAVVTVMGHVDHGKTSLLDAIRSTNVVSGEAGGITQHIGAYQVDSPSHGKITFIDTPGHAAFTAMRARGAKVTDIVVLVVAADDGVMPQTIEAINHAKAAKVPMIVAINKIDKTDSKPERVRSELLQHEVQVE 172
            DTAQ IAEELGHTVKRVAE+DVEEG+FD AD+P  +  RA VVT+MGHVDHGKTSLLDAIR T V +GEAGGITQHIGAYQV SPSHGKITFIDTPGHAAFTAMRARGAKVTDIVVLVVAADDGVMPQT+EA++HAKAA+VP+IVAINKIDK D+KP+RVR+ELLQHE+QVE
Sbjct:  321 DTAQLIAEELGHTVKRVAESDVEEGLFDTADDPVTLVARAPVVTIMGHVDHGKTSLLDAIRQTEVAAGEAGGITQHIGAYQVTSPSHGKITFIDTPGHAAFTAMRARGAKVTDIVVLVVAADDGVMPQTVEAVHHAKAARVPIIVAINKIDKPDAKPDRVRTELLQHEIQVE 492

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BLAST of mRNA_P-wetherbeei_contig55258.1.1 vs. uniprot
Match: A0A327L172_9HYPH (Translation initiation factor IF-2 n=2 Tax=Rhodoplanes TaxID=29407 RepID=A0A327L172_9HYPH)

HSP 1 Score: 286 bits (732), Expect = 1.440e-88
Identity = 148/172 (86.05%), Postives = 159/172 (92.44%), Query Frame = 0

Query:    1 DTAQRIAEELGHTVKRVAEADVEEGVFDAADNPAEMTPRAAVVTVMGHVDHGKTSLLDAIRSTNVVSGEAGGITQHIGAYQVDSPSHGKITFIDTPGHAAFTAMRARGAKVTDIVVLVVAADDGVMPQTIEAINHAKAAKVPMIVAINKIDKTDSKPERVRSELLQHEVQVE 172
            DTAQ IAEELGHTVKRV+EADVEEG+FD AD P ++ PR  VVT+MGHVDHGKTSLLDAIR TNVVSGEAGGITQHIGAYQV +PS  KITFIDTPGHAAFTAMRARGAKVTD+VVLVVAADDGVMPQT+EAI HAKAAKVP+IVAINKIDK D+KPERVR+ELLQHEVQVE
Sbjct:  362 DTAQLIAEELGHTVKRVSEADVEEGLFDVADAPEDLLPRPPVVTIMGHVDHGKTSLLDAIRKTNVVSGEAGGITQHIGAYQVTAPSGAKITFIDTPGHAAFTAMRARGAKVTDVVVLVVAADDGVMPQTVEAIQHAKAAKVPLIVAINKIDKPDAKPERVRTELLQHEVQVE 533

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig55258.1.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig55258.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A140GUT4_9HYPH	1.500e-92	90.12	Translation initiation factor IF-2 n=1 Tax=Rhodopl...	[more]
A0A1W6ZPB3_9HYPH	2.580e-92	88.95	Translation initiation factor IF-2 n=1 Tax=Pseudor...	[more]
J9DD25_9RHOB	4.930e-92	87.21	Translation initiation factor IF-2 n=2 Tax=Rhodovu...	[more]
A0A537NMY0_9PROT	1.680e-91	85.47	Translation initiation factor IF-2 (Fragment) n=1 ...	[more]
A0A537SUC7_9PROT	1.380e-90	84.88	GTP-binding protein (Fragment) n=1 Tax=Alphaproteo...	[more]
A0A521VRB7_9HYPH	1.610e-89	87.21	Translation initiation factor IF-2 n=1 Tax=Xanthob...	[more]
W3RP57_9BRAD	1.750e-89	87.28	Translation initiation factor IF-2 n=1 Tax=Afipia ...	[more]
A0A1M3CLZ3_9BRAD	7.450e-89	84.30	Translation initiation factor IF-2 (Fragment) n=2 ...	[more]
A0A833GFJ5_9HYPH	1.430e-88	84.30	Translation initiation factor IF-2 n=1 Tax=Pseudor...	[more]
A0A327L172_9HYPH	1.440e-88	86.05	Translation initiation factor IF-2 n=2 Tax=Rhodopl...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 41..166 e-value: 2.3E-31 score: 106.7
IPR000795	Translational (tr)-type GTP-binding domain	PFAM	PF00009	GTP_EFTU	coord: 42..166 e-value: 1.4E-31 score: 109.5
IPR000795	Translational (tr)-type GTP-binding domain	PROSITE	PS51722	G_TR_2	coord: 38..172 score: 43.723602
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 35..172 e-value: 1.9E-56 score: 192.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 36..167
None	No IPR available	PIRSR	PIRSR006809-1	PIRSR006809-1	coord: 41..159 e-value: 2.9E-5 score: 20.9
None	No IPR available	PIRSR	PIRSR006809-2	PIRSR006809-2	coord: 41..159 e-value: 2.9E-5 score: 20.9
None	No IPR available	PANTHER	PTHR43381:SF5	TRANSLATION INITIATION FACTOR IF-2, MITOCHONDRIAL	coord: 1..172
None	No IPR available	CDD	cd01887	IF2_eIF5B	coord: 42..172 e-value: 3.80653E-87 score: 250.852
IPR015760	Translation initiation factor IF- 2	PANTHER	PTHR43381	TRANSLATION INITIATION FACTOR IF-2-RELATED	coord: 1..172

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig55258	contig	P-wetherbeei_contig55258:3..518 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig55258.1.1	mRNA_P-wetherbeei_contig55258.1.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig55258 3..518 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig55258.1.1 ID=prot_P-wetherbeei_contig55258.1.1|Name=mRNA_P-wetherbeei_contig55258.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=172bp
DTAQRIAEELGHTVKRVAEADVEEGVFDAADNPAEMTPRAAVVTVMGHVD
HGKTSLLDAIRSTNVVSGEAGGITQHIGAYQVDSPSHGKITFIDTPGHAA
FTAMRARGAKVTDIVVLVVAADDGVMPQTIEAINHAKAAKVPMIVAINKI
DKTDSKPERVRSELLQHEVQVE

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005225	Small_GTP-bd_dom
IPR000795	T_Tr_GTP-bd_dom
IPR027417	P-loop_NTPase
IPR015760	TIF_IF2