prot_P-wetherbeei_contig54935.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig54935.1.1
Unique Nameprot_P-wetherbeei_contig54935.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length135
Homology
BLAST of mRNA_P-wetherbeei_contig54935.1.1 vs. uniprot
Match: A0A4R7PCZ0_9GAMM (RND family efflux transporter MFP subunit n=1 Tax=Panacagrimonas perspica TaxID=381431 RepID=A0A4R7PCZ0_9GAMM)

HSP 1 Score: 157 bits (397), Expect = 2.190e-44
Identity = 79/129 (61.24%), Postives = 97/129 (75.19%), Query Frame = 0
Query:    1 VTISIDALGRTLTGEVLRVVSSGSAVTRGFEVKIAIPATPGLTPGMFGRSEFQIGKRPEIAIPPAALVDRGGLSGVYVVDAESRLHFRWLRTGNRVGDAQVVLAGLDEGERIVSAPTSGMREGDRITVA 129
            V + IDAL   + GEVLR+V+SG  VTRGF+VK++IP T GL PGMFGR +F IGK+  + +P + LVDRGGL+GVYVVDA  RL+FRWLRT +   D  VVLAGL+  ER++ APTS MREGDRI  A
Sbjct:  224 VDVQIDALRAPIRGEVLRLVASGDPVTRGFQVKVSIPPTQGLLPGMFGRGQFTIGKKQALVVPASTLVDRGGLTGVYVVDAGQRLNFRWLRTEHGAADGFVVLAGLEPNERVIVAPTSRMREGDRIAAA 352          
BLAST of mRNA_P-wetherbeei_contig54935.1.1 vs. uniprot
Match: A0A318E6J2_9GAMM (RND family efflux transporter MFP subunit n=1 Tax=Sinimarinibacterium flocculans TaxID=985250 RepID=A0A318E6J2_9GAMM)

HSP 1 Score: 139 bits (351), Expect = 7.960e-38
Identity = 69/129 (53.49%), Postives = 93/129 (72.09%), Query Frame = 0
Query:    1 VTISIDALGRTLTGEVLRVVSSGSAVTRGFEVKIAIPATPGLTPGMFGRSEFQIGKRPEIAIPPAALVDRGGLSGVYVVDAESRLHFRWLRTGNRVGDAQVVLAGLDEGERIVSAPTSGMREGDRITVA 129
            V + +DA+ ++ +GEV+R VSSG+ VTRGFEVKIA+PA+ GL PGMFGR+ F +G+R  + +P +AL DRGGL GV+V   + +L FRWLRTG+ V D  +  AGLD GERIV    + MR+GD +  A
Sbjct:  194 VAVKVDAVQQSFSGEVVRRVSSGNPVTRGFEVKIALPASSGLLPGMFGRAAFTVGQRQALVVPLSALADRGGLKGVFVAGPDQKLRFRWLRTGHIVADGVLAEAGLDAGERIVERVPADMRDGDVLAAA 322          
BLAST of mRNA_P-wetherbeei_contig54935.1.1 vs. uniprot
Match: UPI001CF85036 (efflux RND transporter periplasmic adaptor subunit n=1 Tax=Ferribacterium limneticum TaxID=76259 RepID=UPI001CF85036)

HSP 1 Score: 131 bits (329), Expect = 5.030e-34
Identity = 71/125 (56.80%), Postives = 82/125 (65.60%), Query Frame = 0
Query:    3 ISIDALGRTLTGEVLRVVSSGSAVTRGFEVKIAIPATPGLTPGMFGRSEFQIGKRPEIAIPPAALVDRGGLSGVYVVDAESRLHFRWLRTGNRVGDAQVVLAGLDEGERIVSAPTSGMREGDRIT 127
            +SID L  TL G V RVV SG  VTR + VKIA+P   GL PGMFGR+ F IG      +P  ALV+RGGL+GV+VVD E R HFRWLRTG    D   V AGLD  ERIV+     +R+GDRIT
Sbjct:  261 VSIDGLPTTLKGTVSRVVPSGDPVTRSYLVKIALPEKEGLMPGMFGRASFAIGTSHVPVVPRRALVERGGLNGVFVVDEEGRAHFRWLRTGREWTDQVEVSAGLDANERIVAVAEPALRDGDRIT 385          
BLAST of mRNA_P-wetherbeei_contig54935.1.1 vs. uniprot
Match: A0A848G3K1_9RHOO (Efflux RND transporter periplasmic adaptor subunit n=7 Tax=Betaproteobacteria TaxID=28216 RepID=A0A848G3K1_9RHOO)

HSP 1 Score: 128 bits (322), Expect = 3.110e-33
Identity = 67/130 (51.54%), Postives = 83/130 (63.85%), Query Frame = 0
Query:    3 ISIDALGRTLTGEVLRVVSSGSAVTRGFEVKIAIPATPGLTPGMFGRSEFQIGKRPEIAIPPAALVDRGGLSGVYVVDAESRLHFRWLRTGNRVGDAQVVLAGLDEGERIVSAPTSGMREGDRITVAAGP 132
            +SID+L   L G V RVV SG  VTR ++VKIA+P T GL PGMFGR+ F +G+ P   +P  AL +RGGL+GV+V+D E R  FRWLRTG    D   V AGL   ER V+A    +REGDR+     P
Sbjct:  230 VSIDSLPAPLKGTVTRVVPSGDPVTRSYQVKIALPETVGLMPGMFGRAVFTVGESPSPVVPRRALAERGGLTGVFVLDGEGRARFRWLRTGREWPDRVEVSAGLAADERFVAAVEPALREGDRVMPVEAP 359          
BLAST of mRNA_P-wetherbeei_contig54935.1.1 vs. uniprot
Match: A0A7R7JC61_9GAMM (RND transporter n=2 Tax=Thiohalobacter sp. COW1 TaxID=2795687 RepID=A0A7R7JC61_9GAMM)

HSP 1 Score: 127 bits (318), Expect = 1.080e-32
Identity = 66/127 (51.97%), Postives = 84/127 (66.14%), Query Frame = 0
Query:    3 ISIDALGRTLTGEVLRVVSSGSAVTRGFEVKIAIPATPGLTPGMFGRSEFQIGKRPEIAIPPAALVDRGGLSGVYVVDAESRLHFRWLRTGNRVGDAQVVLAGLDEGERIVSAPTSGMREGDRITVA 129
            +S+D+L   L+G V RVV SG  V+R ++VKIA+P TPGL PGMFGR+ F +G+ P   +P  AL +RGGL+GV+VVD E    FRWLRTG    D   V AGL   ER V+A    +REGDR+  A
Sbjct:  224 VSLDSLPAPLSGRVTRVVPSGDPVSRRYQVKIALPETPGLMPGMFGRAVFTLGESPAPVVPRRALTERGGLTGVFVVDGEGLARFRWLRTGREWPDRVEVSAGLAADERFVAAVEPALREGDRVIPA 350          
BLAST of mRNA_P-wetherbeei_contig54935.1.1 vs. uniprot
Match: A0A3D3S2P6_9GAMM (Efflux RND transporter periplasmic adaptor subunit n=3 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D3S2P6_9GAMM)

HSP 1 Score: 126 bits (316), Expect = 2.590e-32
Identity = 63/128 (49.22%), Postives = 88/128 (68.75%), Query Frame = 0
Query:    1 VTISIDALGRTLTGEVLRVVSSGSAVTRGFEVKIAIPATPGLTPGMFGRSEFQIGKRPEIAIPPAALVDRGGLSGVYVVDAESRLHFRWLRTGNRVGDAQVVLAGLDEGERIVSAPTSGMREGDRITV 128
            V +++DA+     GE+LRVV S   VTR +EVK+++PA  GL PGMFGR++F +G+   +A+P  ALV+RGGL GV+VVD   ++ FRWLRT   + D   V AGL  G+R+V AP S +R+GDR+  
Sbjct:  232 VRVALDAVPGAHEGELLRVVPSADPVTRRYEVKVSLPARSGLLPGMFGRAQFYLGEESVLAVPKTALVERGGLQGVFVVDDGRQVAFRWLRTRRELDDTFEVTAGLTAGQRVVLAPPSDLRDGDRLAA 359          
BLAST of mRNA_P-wetherbeei_contig54935.1.1 vs. uniprot
Match: A0A349W7G0_9BURK (Efflux RND transporter periplasmic adaptor subunit n=1 Tax=Comamonadaceae bacterium TaxID=1871071 RepID=A0A349W7G0_9BURK)

HSP 1 Score: 126 bits (316), Expect = 2.630e-32
Identity = 67/129 (51.94%), Postives = 83/129 (64.34%), Query Frame = 0
Query:    1 VTISIDALGRTLTGEVLRVVSSGSAVTRGFEVKIAIPATPGLTPGMFGRSEFQIGKRPEIAIPPAALVDRGGLSGVYVVDAESRLHFRWLRTGNRVGDAQVVLAGLDEGERIVSAPTSGMREGDRITVA 129
            V +SID+L   L G V RVV SG  V+R ++VKIA+P T GL PGMFGR+ F +G  P   +P  ALV+RGGL+GV+VVD E R  FRWLR      D   V AGL   ER V+AP   +R+GD +T A
Sbjct:  234 VPVSIDSLPAPLQGTVSRVVPSGDPVSRSYQVKIALPETAGLMPGMFGRAAFALGASPAPLVPRRALVERGGLTGVFVVDGEGRARFRWLRIAREWPDKVEVSAGLAADERFVAAPVPALRDGDLVTAA 362          
BLAST of mRNA_P-wetherbeei_contig54935.1.1 vs. uniprot
Match: A0A2N1X9Y6_9GAMM (Efflux RND transporter periplasmic adaptor subunit n=3 Tax=Proteobacteria TaxID=1224 RepID=A0A2N1X9Y6_9GAMM)

HSP 1 Score: 125 bits (313), Expect = 5.160e-32
Identity = 66/124 (53.23%), Postives = 80/124 (64.52%), Query Frame = 0
Query:    3 ISIDALGRTLTGEVLRVVSSGSAVTRGFEVKIAIPATPGLTPGMFGRSEFQIGKRPEIAIPPAALVDRGGLSGVYVVDAESRLHFRWLRTGNRVGDAQVVLAGLDEGERIVSAPTSGMREGDRI 126
            + IDAL +   G V RVV SG  VTR + VK+A+P T GL PGMFGR+ F +G    + +P  ALV+RGGL GV++VD      FRWLRTG    D   V AGL  GERIV+A   G+REGDRI
Sbjct:  217 VKIDALTQVFEGTVSRVVPSGDPVTRSYLVKVALPETAGLMPGMFGRASFAVGDSSSLLVPAQALVERGGLRGVFLVDEAGLARFRWLRTGREWPDRIEVTAGLAAGERIVAAVDPGLREGDRI 340          
BLAST of mRNA_P-wetherbeei_contig54935.1.1 vs. uniprot
Match: A0A3F2UYI4_9GAMM (Efflux RND transporter periplasmic adaptor subunit n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A3F2UYI4_9GAMM)

HSP 1 Score: 124 bits (312), Expect = 7.940e-32
Identity = 64/127 (50.39%), Postives = 90/127 (70.87%), Query Frame = 0
Query:    1 VTISIDALGRTLTGEVLRVVSSGSAVTRGFEVKIAIPATPGLTPGMFGRSEFQIGKRPEIAIPPAALVDRGGLSGVYVVDAESRLHFRWLRTGNRVGDAQV-VLAGLDEGERIVSAPTSGMREGDRI 126
            V + +DAL   LTG V+R+V SG  VTR + VKI++P    L PGMFGR+ F++G+   I +P +A+V+RGGL GV+VVD +   HFRWLR G R   AQV V+AGL + E++V++P + ++EGDRI
Sbjct:  217 VQLQLDALSHPLTGAVIRIVRSGDPVTRSYPVKISVPENADLMPGMFGRALFELGQTDNILLPRSAVVERGGLKGVFVVDKDDLAHFRWLRLG-REWPAQVEVIAGLQQDEQVVASPAASLKEGDRI 342          
BLAST of mRNA_P-wetherbeei_contig54935.1.1 vs. uniprot
Match: A0A2E0LGB7_9GAMM (Efflux transporter periplasmic adaptor subunit n=1 Tax=Porticoccaceae bacterium TaxID=2026782 RepID=A0A2E0LGB7_9GAMM)

HSP 1 Score: 124 bits (312), Expect = 8.380e-32
Identity = 64/129 (49.61%), Postives = 85/129 (65.89%), Query Frame = 0
Query:    1 VTISIDALGRTLTGEVLRVVSSGSAVTRGFEVKIAIPATPGLTPGMFGRSEFQIGKRPEIAIPPAALVDRGGLSGVYVVDAESRLHFRWLRTGNRVGDAQVVLAGLDEGERIVSAPTSGMREGDRITVA 129
            V + IDA GR   GEV+R+VSSG  VTR ++VKI++  T GL PGMFGRS F I  R  I +P AAL +RGGL+GV+VV A   L FRW+RTG    D   + AGL+ GE +++   +G+ +GD +  A
Sbjct:  226 VEVRIDATGRAYAGEVVRLVSSGDPVTRRYQVKISLADTDGLVPGMFGRSAFTIATRDSILVPAAALAERGGLTGVFVVQAGGVLRFRWVRTGRNFADRTEITAGLEPGETLLARVPAGVSDGDLLAGA 354          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54935.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4R7PCZ0_9GAMM2.190e-4461.24RND family efflux transporter MFP subunit n=1 Tax=... [more]
A0A318E6J2_9GAMM7.960e-3853.49RND family efflux transporter MFP subunit n=1 Tax=... [more]
UPI001CF850365.030e-3456.80efflux RND transporter periplasmic adaptor subunit... [more]
A0A848G3K1_9RHOO3.110e-3351.54Efflux RND transporter periplasmic adaptor subunit... [more]
A0A7R7JC61_9GAMM1.080e-3251.97RND transporter n=2 Tax=Thiohalobacter sp. COW1 Ta... [more]
A0A3D3S2P6_9GAMM2.590e-3249.22Efflux RND transporter periplasmic adaptor subunit... [more]
A0A349W7G0_9BURK2.630e-3251.94Efflux RND transporter periplasmic adaptor subunit... [more]
A0A2N1X9Y6_9GAMM5.160e-3253.23Efflux RND transporter periplasmic adaptor subunit... [more]
A0A3F2UYI4_9GAMM7.940e-3250.39Efflux RND transporter periplasmic adaptor subunit... [more]
A0A2E0LGB7_9GAMM8.380e-3249.61Efflux transporter periplasmic adaptor subunit n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.30.170coord: 1..53
e-value: 3.5E-6
score: 28.7
NoneNo IPR availableGENE3D2.40.420.20coord: 54..117
e-value: 1.6E-10
score: 42.9
NoneNo IPR availablePANTHERPTHR30469MULTIDRUG RESISTANCE PROTEIN MDTAcoord: 1..126
NoneNo IPR availablePANTHERPTHR30469:SF15ACRIFLAVIN RESISTANCE PROTEIN ACREcoord: 1..126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig54935contigP-wetherbeei_contig54935:3..407 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig54935.1.1mRNA_P-wetherbeei_contig54935.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig54935 3..407 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig54935.1.1 ID=prot_P-wetherbeei_contig54935.1.1|Name=mRNA_P-wetherbeei_contig54935.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=135bp
VTISIDALGRTLTGEVLRVVSSGSAVTRGFEVKIAIPATPGLTPGMFGRS
EFQIGKRPEIAIPPAALVDRGGLSGVYVVDAESRLHFRWLRTGNRVGDAQ
VVLAGLDEGERIVSAPTSGMREGDRITVAAGPSR*
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