prot_P-wetherbeei_contig54839.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig54839.1.1
Unique Nameprot_P-wetherbeei_contig54839.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length129
Homology
BLAST of mRNA_P-wetherbeei_contig54839.1.1 vs. uniprot
Match: A0A853G6K4_9BURK (MarR family transcriptional regulator n=1 Tax=Alcaligenaceae bacterium TaxID=2021368 RepID=A0A853G6K4_9BURK)

HSP 1 Score: 133 bits (334), Expect = 3.960e-37
Identity = 65/125 (52.00%), Postives = 88/125 (70.40%), Query Frame = 0
Query:    4 GLGRPHHRVLHFAGRTPGITVGSLMSLLRISNQALSRTTNQLTSMGLLEQRYSTEDRRVRLNHLTPDGQALLKLLTERQLALIGAAQSRLTAAEIEGMWNGLSVMVRPEDMAWVTTHPFDLSNES 128
            GLGR HHR+LHFA R PGI+V  L+ +L ISNQA+SR+T+QL S GLLEQRYS EDRRVR +++T  G A L+ LT +QL +I  +  +L+A ++ G W+ L  M+RP D  WVT    ++ + S
Sbjct:   42 GLGRTHHRILHFAARKPGISVNELLEILSISNQAMSRSTSQLMSKGLLEQRYSAEDRRVRQHYVTAQGAAFLEDLTRQQLEVIRRSHQQLSAQQVHGFWDVLDTMIRPNDRKWVTAQIQEIPDTS 166          
BLAST of mRNA_P-wetherbeei_contig54839.1.1 vs. uniprot
Match: A0A368XN59_9BURK (DNA-binding MarR family transcriptional regulator n=1 Tax=Pseudorhodoferax soli TaxID=545864 RepID=A0A368XN59_9BURK)

HSP 1 Score: 134 bits (336), Expect = 4.160e-37
Identity = 66/120 (55.00%), Postives = 85/120 (70.83%), Query Frame = 0
Query:    2 EHGLGRPHHRVLHFAGRTPGITVGSLMSLLRISNQALSRTTNQLTSMGLLEQRYSTEDRRVRLNHLTPDGQALLKLLTERQLALIGAAQSRLTAAEIEGMWNGLSVMVRPEDMAWVTTHP 121
            EHGLGRPHHRVL+FA  +PGITVG L +LLRISNQALSRT  Q+ ++GL+EQ Y  +DRRVR + +T  G ALL    E+Q A+I  A      A+IE  W  L+++ RPED+ W++ HP
Sbjct:   59 EHGLGRPHHRVLYFAQLSPGITVGELTTLLRISNQALSRTMQQIATLGLIEQCYCPDDRRVRRHFVTEQGAALLARSKEKQFAVIRKAHLACPQADIEAFWRTLTLLSRPEDLVWISRHP 178          
BLAST of mRNA_P-wetherbeei_contig54839.1.1 vs. uniprot
Match: A0A418V1K9_RHOPL (MarR family transcriptional regulator n=1 Tax=Rhodopseudomonas palustris TaxID=1076 RepID=A0A418V1K9_RHOPL)

HSP 1 Score: 107 bits (266), Expect = 7.970e-27
Identity = 58/117 (49.57%), Postives = 76/117 (64.96%), Query Frame = 0
Query:    3 HGLGRPHHRVLHFAGRTPGITVGSLMSLLRISNQALSRTTNQLTSMGLLEQRYSTEDRRVRLNHLTPDGQALLKLLTERQLALIGAAQSRLTAAEIEGMWNGLSVMVRPEDMAWVTT 119
            H LGR HHRVL+F  + PGITV  L+S+LRI+NQALSRT NQL  M L+EQ+   +DRR R N  TP G AL + LT  Q   I  + + +   +++  W+ L  MVR +D AW+TT
Sbjct:   50 HKLGRAHHRVLYFVVQQPGITVNELISILRITNQALSRTINQLAQMQLIEQKPGQQDRRHRCNFPTPKGIALCRQLTRLQYQHIDRSLAGVPREDLKVFWDVLLRMVREKDRAWITT 166          
BLAST of mRNA_P-wetherbeei_contig54839.1.1 vs. uniprot
Match: UPI001B3B9EE0 (MarR family winged helix-turn-helix transcriptional regulator n=1 Tax=Azospirillum oleiclasticum TaxID=2735135 RepID=UPI001B3B9EE0)

HSP 1 Score: 101 bits (252), Expect = 1.580e-24
Identity = 51/112 (45.54%), Postives = 70/112 (62.50%), Query Frame = 0
Query:    2 EHGLGRPHHRVLHFAGRTPGITVGSLMSLLRISNQALSRTTNQLTSMGLLEQRYSTEDRRVRLNHLTPDGQALLKLLTERQLALIGAAQSRLTAAEIEGMWNGLSVMVRPED 113
            ++G GRPHHRVL+F  R PGITV  ++++LR++NQALSR  NQL    L+EQR+ + DRR R ++LTP G AL   L + Q   +  A   L    + G W  L+ M+  ED
Sbjct:   52 DYGFGRPHHRVLYFVARRPGITVNEILAILRVTNQALSRVMNQLIEAELIEQRHDSADRRRRQHYLTPKGAALDHQLCQEQFRRVRRAYQSLPRDAVLGFWATLNAMIAEED 163          
BLAST of mRNA_P-wetherbeei_contig54839.1.1 vs. uniprot
Match: UPI001748331F (MarR family winged helix-turn-helix transcriptional regulator n=1 Tax=Camelimonas fluminis TaxID=1576911 RepID=UPI001748331F)

HSP 1 Score: 97.8 bits (242), Expect = 2.870e-23
Identity = 51/117 (43.59%), Postives = 72/117 (61.54%), Query Frame = 0
Query:    2 EHGLGRPHHRVLHFAGRTPGITVGSLMSLLRISNQALSRTTNQLTSMGLLEQRYSTEDRRVRLNHLTPDGQALLKLLTERQLALIGAAQSRLTAAEIEGMWNGLSVMVRPEDMAWVT 118
            ++ LGRPHHRVL+F  + PGITV  L+S LRI+NQA SRT NQL  M L+EQR    DRR R ++ T +G  L + L++ Q   +      +   ++   W+ L  +VR +D AW+T
Sbjct:   46 DYKLGRPHHRVLYFVVQRPGITVNELLSTLRITNQAFSRTINQLVQMNLVEQRMGNGDRRYRCHYPTKEGVELSQRLSQLQYEHVSECLKDVPMGDLGLFWDVLLRLVREQDRAWIT 162          
BLAST of mRNA_P-wetherbeei_contig54839.1.1 vs. uniprot
Match: A0A318SSL0_9RHOB (MarR family transcriptional regulator n=1 Tax=Pseudoroseicyclus aestuarii TaxID=1795041 RepID=A0A318SSL0_9RHOB)

HSP 1 Score: 94.7 bits (234), Expect = 4.700e-22
Identity = 50/111 (45.05%), Postives = 68/111 (61.26%), Query Frame = 0
Query:    2 EHGLGRPHHRVLHFAGRTPGITVGSLMSLLRISNQALSRTTNQLTSMGLLEQRYSTEDRRVRLNHLTPDGQALLKLLTERQLALIGAAQSRLTAAEIEGMWNGLSVMVRPE 112
            E GLGR HHR +HF  R+PG TVG+L++LL ++ Q+L+R    L   GL+ QR  T DRR R  HLTP+G+AL + L++ Q   + AA  R   A + G    L  M+ PE
Sbjct:   43 ERGLGRAHHRAIHFIHRSPGATVGTLLTLLGVTKQSLNRVLRTLVEEGLVVQRIGTSDRRERRLHLTPEGEALERALSDAQRERLRAAYRRAGPAAVAGFREVLEAMMDPE 153          
BLAST of mRNA_P-wetherbeei_contig54839.1.1 vs. uniprot
Match: UPI0014854243 (MarR family transcriptional regulator n=1 Tax=Rhodoligotrophos defluvii TaxID=2561934 RepID=UPI0014854243)

HSP 1 Score: 95.1 bits (235), Expect = 5.700e-22
Identity = 48/113 (42.48%), Postives = 68/113 (60.18%), Query Frame = 0
Query:    5 LGRPHHRVLHFAGRTPGITVGSLMSLLRISNQALSRTTNQLTSMGLLEQRYSTEDRRVRLNHLTPDGQALLKLLTERQLALIGAAQSRLTAAEIEGMWNGLSVMVRPEDMAWV 117
            +GR HHR+L+F  +TPGITVG L SLLR+++QA+ R    L   G ++Q+ S+ DRR R    TP G AL + L++RQ   +  A  +  +  + G W  LS MV P D  W+
Sbjct:   58 MGRTHHRILYFTVQTPGITVGELTSLLRVTHQAIQRPMGDLVRGGYIQQQMSSVDRRQRQLFSTPKGLALFEQLSQRQFERLARAYEKAGSEAVMGFWAVLSAMVEPADHEWI 170          
BLAST of mRNA_P-wetherbeei_contig54839.1.1 vs. uniprot
Match: A0A2E2E2L9_9PROT (MarR family transcriptional regulator n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E2E2L9_9PROT)

HSP 1 Score: 92.4 bits (228), Expect = 5.520e-21
Identity = 47/120 (39.17%), Postives = 64/120 (53.33%), Query Frame = 0
Query:    2 EHGLGRPHHRVLHFAGRTPGITVGSLMSLLRISNQALSRTTNQLTSMGLLEQRYSTEDRRVRLNHLTPDGQALLKLLTERQLALIGAAQSRLTAAEIEGMWNGLSVMVRPEDMAWVTTHP 121
            E   GR HHR+L+F  + PGITVG ++S+LR+S+Q + R  + +   G +EQ+ S  DRR R  + T  G  L   LTERQ   I  A        + G W  L  M+ P D +WV   P
Sbjct:   63 EMSFGRTHHRILYFVKQKPGITVGEMLSVLRVSHQNIQRALSGMIRQGFIEQKTSMHDRRQRQLYATESGTVLFNQLTERQFQRISRAYRAAGPEAVNGFWKVLWHMIEPSDQSWVIRKP 182          
BLAST of mRNA_P-wetherbeei_contig54839.1.1 vs. uniprot
Match: A0A2E2PC23_9RHOB (HTH marR-type domain-containing protein n=2 Tax=Rhodobacteraceae TaxID=31989 RepID=A0A2E2PC23_9RHOB)

HSP 1 Score: 92.4 bits (228), Expect = 9.760e-21
Identity = 46/114 (40.35%), Postives = 67/114 (58.77%), Query Frame = 0
Query:    4 GLGRPHHRVLHFAGRTPGITVGSLMSLLRISNQALSRTTNQLTSMGLLEQRYSTEDRRVRLNHLTPDGQALLKLLTERQLALIGAAQSRLTAAEIEGMWNGLSVMVRPEDMAWV 117
            GLGR HHR+L+F  ++PGITVG L+ L+R++NQ + R    L  MGL++QR S  DRR R  H TP+G+ +L+ +T  Q   IG A        + G W  L  ++   +  W+
Sbjct:   76 GLGRVHHRILYFVTQSPGITVGQLLDLIRVTNQNIHRPMGDLVRMGLIQQRTSEIDRRQRHLHTTPEGEEMLRKITSFQFDRIGRACEAAGPEAMRGFWTVLWNLIEDRERDWL 189          
BLAST of mRNA_P-wetherbeei_contig54839.1.1 vs. uniprot
Match: UPI00117FDB94 (MarR family transcriptional regulator n=1 Tax=Rhodoligotrophos appendicifer TaxID=987056 RepID=UPI00117FDB94)

HSP 1 Score: 91.7 bits (226), Expect = 1.180e-20
Identity = 46/113 (40.71%), Postives = 66/113 (58.41%), Query Frame = 0
Query:    5 LGRPHHRVLHFAGRTPGITVGSLMSLLRISNQALSRTTNQLTSMGLLEQRYSTEDRRVRLNHLTPDGQALLKLLTERQLALIGAAQSRLTAAEIEGMWNGLSVMVRPEDMAWV 117
            +GR HHR+L+F  RTPGITVG + SLLR+++Q + R    L   G +EQ+ S  DRR R    T  G  L + L++RQ   +  A S    A ++G W  L+ +V P D+ W+
Sbjct:   56 MGRTHHRILYFTVRTPGITVGEMTSLLRVTHQNVQRAMGDLLREGYIEQQMSNVDRRQRRLFSTSKGLELFEQLSQRQFERLARAYSEAGPAAVQGFWAVLTALVEPSDLQWM 168          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54839.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A853G6K4_9BURK3.960e-3752.00MarR family transcriptional regulator n=1 Tax=Alca... [more]
A0A368XN59_9BURK4.160e-3755.00DNA-binding MarR family transcriptional regulator ... [more]
A0A418V1K9_RHOPL7.970e-2749.57MarR family transcriptional regulator n=1 Tax=Rhod... [more]
UPI001B3B9EE01.580e-2445.54MarR family winged helix-turn-helix transcriptiona... [more]
UPI001748331F2.870e-2343.59MarR family winged helix-turn-helix transcriptiona... [more]
A0A318SSL0_9RHOB4.700e-2245.05MarR family transcriptional regulator n=1 Tax=Pseu... [more]
UPI00148542435.700e-2242.48MarR family transcriptional regulator n=1 Tax=Rhod... [more]
A0A2E2E2L9_9PROT5.520e-2139.17MarR family transcriptional regulator n=1 Tax=Rhod... [more]
A0A2E2PC23_9RHOB9.760e-2140.35HTH marR-type domain-containing protein n=2 Tax=Rh... [more]
UPI00117FDB941.180e-2040.71MarR family transcriptional regulator n=1 Tax=Rhod... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000835MarR-type HTH domainSMARTSM00347marrlong4coord: 1..98
e-value: 2.8E-14
score: 63.4
IPR000835MarR-type HTH domainPFAMPF12802MarR_2coord: 3..61
e-value: 1.7E-9
score: 37.6
IPR000835MarR-type HTH domainPROSITEPS50995HTH_MARR_2coord: 1..110
score: 21.599012
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 1..112
e-value: 2.2E-20
score: 74.9
NoneNo IPR availablePANTHERPTHR33164TRANSCRIPTIONAL REGULATOR, MARR FAMILYcoord: 2..108
NoneNo IPR availablePANTHERPTHR33164:SF44MARR-FAMILY TRANSCRIPTIONAL REGULATOR-RELATEDcoord: 2..108
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 2..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig54839contigP-wetherbeei_contig54839:17..403 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig54839.1.1mRNA_P-wetherbeei_contig54839.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig54839 2..403 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig54839.1.1 ID=prot_P-wetherbeei_contig54839.1.1|Name=mRNA_P-wetherbeei_contig54839.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=129bp
MEHGLGRPHHRVLHFAGRTPGITVGSLMSLLRISNQALSRTTNQLTSMGL
LEQRYSTEDRRVRLNHLTPDGQALLKLLTERQLALIGAAQSRLTAAEIEG
MWNGLSVMVRPEDMAWVTTHPFDLSNES*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000835HTH_MarR-typ
IPR036388WH-like_DNA-bd_sf
IPR036390WH_DNA-bd_sf