prot_P-wetherbeei_contig5470.2.2 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig5470.2.2
Unique Name	prot_P-wetherbeei_contig5470.2.2
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	185

Homology

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BLAST of mRNA_P-wetherbeei_contig5470.2.2 vs. uniprot
Match: D7G245_ECTSI (Rab18, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G245_ECTSI)

HSP 1 Score: 306 bits (785), Expect = 3.600e-104
Identity = 151/184 (82.07%), Postives = 167/184 (90.76%), Query Frame = 0

Query:    1 MLRFTDDTFDDHLQSTIGVDFKVKMMDIGNKRVKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPDTFENLSKWLEEVETYHPGRGREVVKLLVGNKIDQERVVPRAEAEAWARSKGMLFLEASAKSKVGIKQVFSEVVQKILENPALLANTAPGRPRGTVNMHQTAPSSGXXXXXMCCG 184
            MLRFTDDTFDDHLQSTIGVDFKVKM+D G KR+KMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRP+TF+NLSKWLEEVETYHPGRGREVVKLLVGNK+D+ERVV RA+AE +ARSKGMLFLEASAK+KVG+KQVF EVVQKIL+NP+LLANTAPGRPR TV+   + P+       +CCG
Sbjct:   29 MLRFTDDTFDDHLQSTIGVDFKVKMVDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPETFDNLSKWLEEVETYHPGRGREVVKLLVGNKVDKERVVTRAQAEEYARSKGMLFLEASAKTKVGVKQVFEEVVQKILDNPSLLANTAPGRPRDTVD--PSRPNPNQAGGGLCCG 210

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BLAST of mRNA_P-wetherbeei_contig5470.2.2 vs. uniprot
Match: A0A835YPZ0_9STRA (Rab18, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPZ0_9STRA)

HSP 1 Score: 284 bits (726), Expect = 3.250e-95
Identity = 141/177 (79.66%), Postives = 160/177 (90.40%), Query Frame = 0

Query:    1 MLRFTDDTFDDHLQSTIGVDFKVKMMDIGNKRVKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPDTFENLSKWLEEVETYHPGRGREVVKLLVGNKIDQERVVPRAEAEAWARSKGMLFLEASAKSKVGIKQVFSEVVQKILENPALLANTAPGRPRGTVNMH--QTAPSSG 175
            MLRFTDD+FDD LQSTIGVDFKVKMM++G+K++KMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDV RP+TF+NL+KWLEEVETYHPGRGR+VVKLLVGNK+D  R VPR +AEAWARSKGMLFLEASAK++VGI+Q F EVV KILE+PALLANT PG+PR TV++   Q  P SG
Sbjct:   27 MLRFTDDSFDDKLQSTIGVDFKVKMMEVGDKKIKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVERPETFDNLNKWLEEVETYHPGRGRDVVKLLVGNKVDCPRAVPREQAEAWARSKGMLFLEASAKTEVGIRQAFEEVVHKILESPALLANTTPGKPR-TVDLAATQNTPPSG 202

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BLAST of mRNA_P-wetherbeei_contig5470.2.2 vs. uniprot
Match: A0A4D9D7L4_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D7L4_9STRA)

HSP 1 Score: 270 bits (689), Expect = 1.340e-89
Identity = 132/183 (72.13%), Postives = 154/183 (84.15%), Query Frame = 0

Query:    1 MLRFTDDTFDDHLQSTIGVDFKVKMMDIGNKRVKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPDTFENLSKWLEEVETYHPGRGREVVKLLVGNKIDQERVVPRAEAEAWARSKGMLFLEASAKSKVGIKQVFSEVVQKILENPALLANTAPGRPRGTVNMHQTAPSSGXXXXXMCC 183
            +LRFTDD FDDH QSTIGVDFKVKM+++ +KR+KMTIWDTAGQERFRTLTSSYYRGAQGI+LVYDV R ++FENL+ WL+EVE Y  G GRE+VK+LVGNK+D+ER+VPR EAEAWARSKGMLFLEASAK++ GI+QVF EVVQKIL+NP+LL NTAPGRPR  +     A  SG      CC
Sbjct:   29 LLRFTDDAFDDHQQSTIGVDFKVKMIEVDHKRIKMTIWDTAGQERFRTLTSSYYRGAQGIILVYDVNRRESFENLNHWLQEVEVYSTGGGREIVKVLVGNKVDKERMVPREEAEAWARSKGMLFLEASAKTRTGIRQVFLEVVQKILDNPSLLTNTAPGRPRVNLQADAAAKGSGG----YCC 207

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BLAST of mRNA_P-wetherbeei_contig5470.2.2 vs. uniprot
Match: A0A067C8B0_SAPPC (Uncharacterized protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C8B0_SAPPC)

HSP 1 Score: 267 bits (683), Expect = 1.260e-88
Identity = 133/183 (72.68%), Postives = 150/183 (81.97%), Query Frame = 0

Query:    1 MLRFTDDTFDDHLQSTIGVDFKVKMMDIGNKRVKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPDTFENLSKWLEEVETYHPGRGREVVKLLVGNKIDQERVVPRAEAEAWARSKGMLFLEASAKSKVGIKQVFSEVVQKILENPALLANTAPGRPRGTVNMHQTAPSSGXXXXXMCC 183
            +LRFTDDTFDDHLQSTIGVDFKVKMM +  KR+KMTIWDTAGQERFRTLTSSYYRGAQGI+LVYDV R +TFENL  WL+EVE Y P  GR+VVKLLVGNKID+ERVV R E EAWARSKGMLF+E+SAK+K+GI+QVF+EVVQKIL+NPALLANTAP      VN+     +        CC
Sbjct:   29 LLRFTDDTFDDHLQSTIGVDFKVKMMQVDGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIILVYDVARKETFENLGTWLQEVEVYSPANGRDVVKLLVGNKIDKERVVSRQEGEAWARSKGMLFVESSAKTKIGIQQVFNEVVQKILDNPALLANTAPRSRAKKVNLSADKYAPHANAGGGCC 211

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BLAST of mRNA_P-wetherbeei_contig5470.2.2 vs. uniprot
Match: W7UBM5_9STRA (Rab family gtpase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UBM5_9STRA)

HSP 1 Score: 268 bits (686), Expect = 8.420e-87
Identity = 131/175 (74.86%), Postives = 154/175 (88.00%), Query Frame = 0

Query:    1 MLRFTDDTFDDHLQSTIGVDFKVKMMDIGNKRVKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPDTFENLSKWLEEVETYHPGRGREVVKLLVGNKIDQERVVPRAEAEAWARSKGMLFLEASAKSKVGIKQVFSEVVQKILENPALLANTAPGRPRGTVNMHQTAPSSG 175
            +LRFTDD FDDH QSTIGVDFKVKM+++ +KR+KMTIWDTAGQERFRTLTSSYYRGAQGI+LVYDV R ++FENL+ WL+EVE Y  G GRE+VK+LVGNK+D+ER+VPR EAEAWARSKGMLFLEASAK++ GI+QVF EVVQKIL+NP+LL NTAPGRPR  VN+   A + G
Sbjct:   85 LLRFTDDAFDDHQQSTIGVDFKVKMIEVDHKRIKMTIWDTAGQERFRTLTSSYYRGAQGIILVYDVNRRESFENLNHWLQEVEVYSTGGGREIVKVLVGNKVDKERMVPREEAEAWARSKGMLFLEASAKTRTGIRQVFLEVVQKILDNPSLLTNTAPGRPR--VNLQADAAAKG 257

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BLAST of mRNA_P-wetherbeei_contig5470.2.2 vs. uniprot
Match: D0NMU9_PHYIT (Rab18 family GTPase, putative n=6 Tax=Oomycota TaxID=4762 RepID=D0NMU9_PHYIT)

HSP 1 Score: 262 bits (669), Expect = 1.260e-86
Identity = 131/163 (80.37%), Postives = 147/163 (90.18%), Query Frame = 0

Query:    1 MLRFTDDTFDDHLQSTIGVDFKVKMMDIGNKRVKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPDTFENLSKWLEEVETYHPGRGREVVKLLVGNKIDQERVVPRAEAEAWARSKGMLFLEASAKSKVGIKQVFSEVVQKILENPALLANTAPGRPRG 163
            +LRFTDDTFDD+LQSTIGVDFKVKMM +  K++KMTIWDTAGQERFRTLTSSYYRGAQGI+LVYDV R DTFENL  WL+EVE Y P  GR+VVKLLVGNKID+ERVV R EAE WARSKGMLF+E+SAK+K+GI+QVF+EVVQKILENPALL+NTAP R RG
Sbjct:   24 LLRFTDDTFDDNLQSTIGVDFKVKMMQVDGKKIKMTIWDTAGQERFRTLTSSYYRGAQGIVLVYDVARRDTFENLDLWLQEVEVYSPAGGRDVVKLLVGNKIDKERVVSRREAEDWARSKGMLFVESSAKTKIGIQQVFNEVVQKILENPALLSNTAP-RSRG 185

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BLAST of mRNA_P-wetherbeei_contig5470.2.2 vs. uniprot
Match: A0A6A3N672_9STRA (Uncharacterized protein n=21 Tax=Peronosporaceae TaxID=4777 RepID=A0A6A3N672_9STRA)

HSP 1 Score: 261 bits (668), Expect = 6.800e-86
Identity = 131/163 (80.37%), Postives = 147/163 (90.18%), Query Frame = 0

Query:    1 MLRFTDDTFDDHLQSTIGVDFKVKMMDIGNKRVKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPDTFENLSKWLEEVETYHPGRGREVVKLLVGNKIDQERVVPRAEAEAWARSKGMLFLEASAKSKVGIKQVFSEVVQKILENPALLANTAPGRPRG 163
            +LRFTDDTFDD+LQSTIGVDFKVKMM +  K++KMTIWDTAGQERFRTLTSSYYRGAQGI+LVYDV R DTFENL  WL+EVE Y P  GR+VVKLLVGNKID+ERVV R EAE WARSKGMLF+E+SAK+K+GI+QVF+EVVQKILENPALL+NTAP R RG
Sbjct:   64 LLRFTDDTFDDNLQSTIGVDFKVKMMQVDGKKIKMTIWDTAGQERFRTLTSSYYRGAQGIVLVYDVARRDTFENLDLWLQEVEVYSPAGGRDVVKLLVGNKIDKERVVSRREAEDWARSKGMLFVESSAKTKIGIQQVFNEVVQKILENPALLSNTAP-RNRG 225

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BLAST of mRNA_P-wetherbeei_contig5470.2.2 vs. uniprot
Match: A0A6G0KMK3_9STRA (Uncharacterized protein n=4 Tax=Peronosporaceae TaxID=4777 RepID=A0A6G0KMK3_9STRA)

HSP 1 Score: 261 bits (668), Expect = 1.190e-85
Identity = 131/163 (80.37%), Postives = 147/163 (90.18%), Query Frame = 0

Query:    1 MLRFTDDTFDDHLQSTIGVDFKVKMMDIGNKRVKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPDTFENLSKWLEEVETYHPGRGREVVKLLVGNKIDQERVVPRAEAEAWARSKGMLFLEASAKSKVGIKQVFSEVVQKILENPALLANTAPGRPRG 163
            +LRFTDDTFDD+LQSTIGVDFKVKMM +  K++KMTIWDTAGQERFRTLTSSYYRGAQGI+LVYDV R DTFENL  WL+EVE Y P  GR+VVKLLVGNKID+ERVV R EAE WARSKGMLF+E+SAK+K+GI+QVF+EVVQKILENPALL+NTAP R RG
Sbjct:   81 LLRFTDDTFDDNLQSTIGVDFKVKMMQVDGKKIKMTIWDTAGQERFRTLTSSYYRGAQGIVLVYDVARRDTFENLDLWLQEVEVYSPAGGRDVVKLLVGNKIDKERVVSRREAEDWARSKGMLFVESSAKTKIGIQQVFNEVVQKILENPALLSNTAP-RNRG 242

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BLAST of mRNA_P-wetherbeei_contig5470.2.2 vs. uniprot
Match: A0A7S4MWY2_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MWY2_9STRA)

HSP 1 Score: 261 bits (666), Expect = 1.200e-85
Identity = 129/176 (73.30%), Postives = 151/176 (85.80%), Query Frame = 0

Query:    1 MLRFTDDTFDDHLQSTIGVDFKVKMMDIGNKRVKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPDTFENLSKWLEEVETYHPGRGREVVKLLVGNKIDQERVVPRAEAEAWARSKGMLFLEASAKSKVGIKQVFSEVVQKILENPALLANTAPGRPRGTVNMH-QTAPSSG 175
            +LRFTDD+FDDH+QSTIGVDFKVK MD+ +KRVK+T+WDTAGQERFRTLTSSYYRGAQG+++VYDVTR D+FENL +WL+EV+ Y P  G  VVKLLVGNKID ER VPR EAEAWARS+GMLFLEASAK+KVGI+Q F EVVQKILE+P LL NT PGRP+ T+    +  P+SG
Sbjct:   54 LLRFTDDSFDDHIQSTIGVDFKVKHMDVMDKRVKLTVWDTAGQERFRTLTSSYYRGAQGVVMVYDVTRRDSFENLDQWLKEVKLYSPNNGEGVVKLLVGNKIDLERKVPREEAEAWARSQGMLFLEASAKTKVGIRQCFMEVVQKILEDPDLLMNTVPGRPKVTIKPQPEGRPTSG 229

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BLAST of mRNA_P-wetherbeei_contig5470.2.2 vs. uniprot
Match: A0A7S2UMV5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UMV5_9STRA)

HSP 1 Score: 258 bits (660), Expect = 5.200e-85
Identity = 126/185 (68.11%), Postives = 149/185 (80.54%), Query Frame = 0

Query:    1 MLRFTDDTFDDHLQSTIGVDFKVKMMDIGNKRVKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPDTFENLSKWLEEVETYHPGRGREVVKLLVGNKIDQERVVPRAEAEAWARSKGMLFLEASAKSKVGIKQVFSEVVQKILENPALLANTAPGRPRGTVNMHQTAPS--SGXXXXXMCC 183
            +LRFTDD+FDDH+QSTIGVDFKVK MD+  KR+K+T+WDTAGQERFRTLTSSYYRGAQG+++VYDVTR D+FENL +WL+EV+ Y P  G  V+KLLVGNKID ER VPR EAEAWARS+GMLFLEASAK+K GI+Q F EVVQKI+E+P LL NTAPGRP+  +   +  P   S       CC
Sbjct:   35 LLRFTDDSFDDHIQSTIGVDFKVKHMDVAGKRIKLTVWDTAGQERFRTLTSSYYRGAQGVVMVYDVTRRDSFENLDQWLKEVKLYSPNNGEGVIKLLVGNKIDLERKVPREEAEAWARSQGMLFLEASAKTKKGIRQCFMEVVQKIIEDPDLLLNTAPGRPKMNLKREKRGPGGPSSISDDGGCC 219

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig5470.2.2 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig5470.2.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G245_ECTSI	3.600e-104	82.07	Rab18, RAB family GTPase n=2 Tax=Ectocarpus TaxID=...	[more]
A0A835YPZ0_9STRA	3.250e-95	79.66	Rab18, rab family GTPase n=1 Tax=Tribonema minus T...	[more]
A0A4D9D7L4_9STRA	1.340e-89	72.13	Uncharacterized protein n=2 Tax=Monodopsidaceae Ta...	[more]
A0A067C8B0_SAPPC	1.260e-88	72.68	Uncharacterized protein n=4 Tax=Saprolegniaceae Ta...	[more]
W7UBM5_9STRA	8.420e-87	74.86	Rab family gtpase n=1 Tax=Nannochloropsis gaditana...	[more]
D0NMU9_PHYIT	1.260e-86	80.37	Rab18 family GTPase, putative n=6 Tax=Oomycota Tax...	[more]
A0A6A3N672_9STRA	6.800e-86	80.37	Uncharacterized protein n=21 Tax=Peronosporaceae T...	[more]
A0A6G0KMK3_9STRA	1.190e-85	80.37	Uncharacterized protein n=4 Tax=Peronosporaceae Ta...	[more]
A0A7S4MWY2_9STRA	1.200e-85	73.30	Hypothetical protein n=2 Tax=Odontella aurita TaxI...	[more]
A0A7S2UMV5_9STRA	5.200e-85	68.11	Hypothetical protein n=1 Tax=Attheya septentrional...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 91..104 score: 45.45 coord: 8..24 score: 33.63 coord: 124..146 score: 33.75 coord: 26..48 score: 46.91
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 1..149 e-value: 1.8E-74 score: 263.4
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 1..181 e-value: 0.0077 score: -7.4
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 2..149 e-value: 2.3E-10 score: 31.2
None	No IPR available	PANTHER	PTHR47977:SF19	RAS-RELATED PROTEIN RABC1-LIKE	coord: 1..173
None	No IPR available	PANTHER	PTHR47977	LD21953P-RELATED	coord: 1..173
None	No IPR available	PROSITE	PS51420	RHO	coord: 1..147 score: 8.807402
None	No IPR available	PROSITE	PS51419	RAB	coord: 1..183 score: 29.959629
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 1..149 e-value: 3.3E-10 score: 11.5
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 1..147 e-value: 2.2E-48 score: 163.9
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 1..167 score: 14.388915
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..170 e-value: 1.7E-53 score: 182.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 2..162
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 3..142 e-value: 1.9E-18 score: 64.8

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig5470	contig	P-wetherbeei_contig5470:667..2719 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig5470.2.2	mRNA_P-wetherbeei_contig5470.2.2	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig5470 592..3051 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig5470.2.2 ID=prot_P-wetherbeei_contig5470.2.2|Name=mRNA_P-wetherbeei_contig5470.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=185bp
MLRFTDDTFDDHLQSTIGVDFKVKMMDIGNKRVKMTIWDTAGQERFRTLT
SSYYRGAQGIMLVYDVTRPDTFENLSKWLEEVETYHPGRGREVVKLLVGN
KIDQERVVPRAEAEAWARSKGMLFLEASAKSKVGIKQVFSEVVQKILENP
ALLANTAPGRPRGTVNMHQTAPSSGGGGGGMCCG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001806	Small_GTPase
IPR027417	P-loop_NTPase
IPR005225	Small_GTP-bd_dom