prot_P-wetherbeei_contig5467.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5467.2.1 vs. uniprot
Match: A0A6H5JAF8_9PHAE (DNA-directed RNA polymerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAF8_9PHAE) HSP 1 Score: 164 bits (416), Expect = 4.450e-45 Identity = 77/114 (67.54%), Postives = 94/114 (82.46%), Query Frame = 0
Query: 1 MRGLMRQHIDSFDYFVNVEIKKIVLTQSNREVLSEADPKFFLRYTDVRVGTPSIVEDSTSDEGRPITPFQCRLRDCTYSAPVYVNVKYPRGRVMVSKKNVPIGRIPIMLRSCRC 114
+RGLMRQHIDS+DYFVNV+I KIV + NREVLS+ DPKFFL+YT + VGTP I ED + + ITPFQCRLRDCTYSAP++VNV+Y RGR +V+K N+ IGRIP+ML SC+C
Sbjct: 90 LRGLMRQHIDSYDYFVNVDISKIVQAKGNREVLSDVDPKFFLQYTGITVGTPCIEEDDYTVKS--ITPFQCRLRDCTYSAPLWVNVRYTRGRQIVNKTNINIGRIPVMLLSCKC 201
BLAST of mRNA_P-wetherbeei_contig5467.2.1 vs. uniprot
Match: I2CNY0_NANGC (DNA-directed RNA polymerase subunit beta n=3 Tax=Monodopsidaceae TaxID=425072 RepID=I2CNY0_NANGC) HSP 1 Score: 160 bits (404), Expect = 3.160e-43 Identity = 78/114 (68.42%), Postives = 92/114 (80.70%), Query Frame = 0
Query: 1 MRGLMRQHIDSFDYFVNVEIKKIVLTQSNREVLSEADPKFFLRYTDVRVGTPSIVEDSTSDEGRPITPFQCRLRDCTYSAPVYVNVKYPRGRVMVSKKNVPIGRIPIMLRSCRC 114
+RGLMRQHIDSFD+FVN EIK IV SNRE+ SEADPKF+LRYTDV VG PS+ +D+ +TPFQCRLRDCTYSAP+ V+V+Y RGR +V K+ V IGRIPIMLRSC+C
Sbjct: 58 LRGLMRQHIDSFDFFVNREIKDIVNAASNRELRSEADPKFWLRYTDVHVGEPSVDDDAYVSSR--VTPFQCRLRDCTYSAPITVDVRYTRGRQIVVKRGVMIGRIPIMLRSCKC 169
BLAST of mRNA_P-wetherbeei_contig5467.2.1 vs. uniprot
Match: A0A7S2XTK8_9STRA (DNA-directed RNA polymerase (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XTK8_9STRA) HSP 1 Score: 149 bits (375), Expect = 2.520e-42 Identity = 72/114 (63.16%), Postives = 89/114 (78.07%), Query Frame = 0
Query: 1 MRGLMRQHIDSFDYFVNVEIKKIVLTQSNREVLSEADPKFFLRYTDVRVGTPSIVEDSTSDEGRPITPFQCRLRDCTYSAPVYVNVKYPRGRVMVSKKNVPIGRIPIMLRSCRC 114
+RGLMRQHIDSFD+FV E+K+IV + S E+ S+ DPKF+LRYTD VG PS+ ED+ + TPFQCRLRDCTYSAP+YVNV+Y RGR +V KK V +GR+PIMLRS +C
Sbjct: 76 LRGLMRQHIDSFDHFVTTEMKQIVQSPSACEIRSDHDPKFYLRYTDCWVGEPSVEEDAYAFS--QATPFQCRLRDCTYSAPIYVNVRYTRGRQIVIKKKVLVGRMPIMLRSSKC 187
BLAST of mRNA_P-wetherbeei_contig5467.2.1 vs. uniprot
Match: A0A7S4I9T1_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I9T1_9STRA) HSP 1 Score: 154 bits (388), Expect = 4.570e-41 Identity = 74/114 (64.91%), Postives = 91/114 (79.82%), Query Frame = 0
Query: 1 MRGLMRQHIDSFDYFVNVEIKKIVLTQSNREVLSEADPKFFLRYTDVRVGTPSIVEDSTSDEGRPITPFQCRLRDCTYSAPVYVNVKYPRGRVMVSKKNVPIGRIPIMLRSCRC 114
+RGLM+QHIDSFDYFVN+E+K+IV + S E+ SE DPKF+LRYTD VG PS+ EDS + +PFQCRLRDCTYSAP+YVNV+Y RGR +V KK V +GR+PIMLRS +C
Sbjct: 312 LRGLMKQHIDSFDYFVNIEMKQIVQSPSACEIRSEHDPKFYLRYTDCWVGEPSVEEDSYAFT--QASPFQCRLRDCTYSAPIYVNVRYTRGRQIVVKKKVVVGRMPIMLRSSKC 423
BLAST of mRNA_P-wetherbeei_contig5467.2.1 vs. uniprot
Match: A0A7S2WH87_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WH87_9STRA) HSP 1 Score: 153 bits (387), Expect = 6.180e-41 Identity = 72/114 (63.16%), Postives = 89/114 (78.07%), Query Frame = 0
Query: 1 MRGLMRQHIDSFDYFVNVEIKKIVLTQSNREVLSEADPKFFLRYTDVRVGTPSIVEDSTSDEGRPITPFQCRLRDCTYSAPVYVNVKYPRGRVMVSKKNVPIGRIPIMLRSCRC 114
MRGLM QHIDSFDYFVNV+IK IV SNREV S+ DP+++LRYT+V VG P I +D+ + P TPF+CRLRDCTY AP+ V++K+ RG +V+ VPIGRIPIMLRSC+C
Sbjct: 33 MRGLMTQHIDSFDYFVNVDIKNIVNAASNREVRSDVDPRWWLRYTNVSVGEPEIFDDA--HQRTPATPFECRLRDCTYYAPIIVSIKFTRGNQIVNMSGVPIGRIPIMLRSCKC 144
BLAST of mRNA_P-wetherbeei_contig5467.2.1 vs. uniprot
Match: A0A448ZSN6_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZSN6_9STRA) HSP 1 Score: 152 bits (384), Expect = 1.570e-40 Identity = 74/114 (64.91%), Postives = 90/114 (78.95%), Query Frame = 0
Query: 1 MRGLMRQHIDSFDYFVNVEIKKIVLTQSNREVLSEADPKFFLRYTDVRVGTPSIVEDSTSDEGRPITPFQCRLRDCTYSAPVYVNVKYPRGRVMVSKKNVPIGRIPIMLRSCRC 114
MR LMRQHIDSFD+FVNVE+K+IV + S RE+ SE DP F+LRYTD +G PS+ EDS + TPFQCRLRDCTYSAP+YVNV+Y RGR +V K+ V IG++PIMLRS +C
Sbjct: 151 MRSLMRQHIDSFDHFVNVEMKQIVQSPSAREIRSEHDPNFYLRYTDCWLGEPSVEEDSYATS--TATPFQCRLRDCTYSAPIYVNVRYTRGRQIVVKRKVKIGQMPIMLRSQKC 262
BLAST of mRNA_P-wetherbeei_contig5467.2.1 vs. uniprot
Match: A0A6U4JF41_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4JF41_9STRA) HSP 1 Score: 152 bits (383), Expect = 2.140e-40 Identity = 72/114 (63.16%), Postives = 91/114 (79.82%), Query Frame = 0
Query: 1 MRGLMRQHIDSFDYFVNVEIKKIVLTQSNREVLSEADPKFFLRYTDVRVGTPSIVEDSTSDEGRPITPFQCRLRDCTYSAPVYVNVKYPRGRVMVSKKNVPIGRIPIMLRSCRC 114
+RGL+ QHI+SF+YFVNVEIKKIV QSN EV SE DPKF+LRYT+V VG P++ + + + ITPF+CRLRDCTYSA +YV+V+Y R +V K+ +PIGRIPIMLRSC+C
Sbjct: 32 LRGLITQHIESFNYFVNVEIKKIVAAQSNFEVRSEQDPKFYLRYTNVYVGEPTVDDPNFVESS--ITPFECRLRDCTYSAMIYVDVRYTRNNKIVVKQKIPIGRIPIMLRSCKC 143
BLAST of mRNA_P-wetherbeei_contig5467.2.1 vs. uniprot
Match: A0A1E7EUM7_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EUM7_9STRA) HSP 1 Score: 149 bits (377), Expect = 1.380e-39 Identity = 73/114 (64.04%), Postives = 89/114 (78.07%), Query Frame = 0
Query: 1 MRGLMRQHIDSFDYFVNVEIKKIVLTQSNREVLSEADPKFFLRYTDVRVGTPSIVEDSTSDEGRPITPFQCRLRDCTYSAPVYVNVKYPRGRVMVSKKNVPIGRIPIMLRSCRC 114
+R LMRQHIDSFDY VNVE+K+IV + S RE+ SE DP F+LRYTD +G PS+ EDS + TPFQCRLRDCTYSAP+YVNV+Y RGR +V K+ V IG++PIMLRS +C
Sbjct: 98 IRSLMRQHIDSFDYLVNVELKQIVQSPSAREIRSEHDPNFYLRYTDCWLGEPSLEEDSYAVS--TATPFQCRLRDCTYSAPIYVNVRYTRGRQIVVKRKVKIGQMPIMLRSQKC 209
BLAST of mRNA_P-wetherbeei_contig5467.2.1 vs. uniprot
Match: F0J944_AMBVA (DNA-directed RNA polymerase (Fragment) n=1 Tax=Amblyomma variegatum TaxID=34610 RepID=F0J944_AMBVA) HSP 1 Score: 139 bits (349), Expect = 2.120e-39 Identity = 64/114 (56.14%), Postives = 88/114 (77.19%), Query Frame = 0
Query: 1 MRGLMRQHIDSFDYFVNVEIKKIVLTQSNREVLSEADPKFFLRYTDVRVGTPSIVEDSTSDEGRPITPFQCRLRDCTYSAPVYVNVKYPRGRVMVSKKNVPIGRIPIMLRSCRC 114
MRGL+R HIDSF++F+NVEIK+I+ ++N + S+ADP+F+L+Y D+ VGTP++ ED T GRP TP +CRLRD TYSAP+ V+++Y RG+ V + PIGR+PIMLRS C
Sbjct: 38 MRGLVRHHIDSFNHFINVEIKEIM--RANERITSDADPQFYLKYLDIHVGTPNVQEDFTV--GRPTTPHECRLRDMTYSAPITVDIEYTRGQERVMRSGFPIGRMPIMLRSANC 147
BLAST of mRNA_P-wetherbeei_contig5467.2.1 vs. uniprot
Match: A0A1Z5KRH4_FISSO (DNA-directed RNA polymerase subunit beta n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KRH4_FISSO) HSP 1 Score: 147 bits (372), Expect = 6.520e-39 Identity = 73/114 (64.04%), Postives = 89/114 (78.07%), Query Frame = 0
Query: 1 MRGLMRQHIDSFDYFVNVEIKKIVLTQSNREVLSEADPKFFLRYTDVRVGTPSIVEDSTSDEGRPITPFQCRLRDCTYSAPVYVNVKYPRGRVMVSKKNVPIGRIPIMLRSCRC 114
+R L+RQH+DSFDYFV E+++IV + S RE+ SE DPKF+LRY VG PSI EDS + + ITPF+CRLRDCTYSAP+YVNV+Y RGR V K+NV IGRIPIMLRS +C
Sbjct: 109 LRSLLRQHVDSFDYFVETEMQQIVKSASAREIRSEHDPKFYLRYEACWVGEPSIEEDSYTMKS--ITPFECRLRDCTYSAPIYVNVRYIRGRQPVVKRNVMIGRIPIMLRSKKC 220 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5467.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-wetherbeei_contig5467.2.1 ID=prot_P-wetherbeei_contig5467.2.1|Name=mRNA_P-wetherbeei_contig5467.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=114bpback to top |