prot_P-wetherbeei_contig54403.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig54403.1.1
Unique Name	prot_P-wetherbeei_contig54403.1.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	176

Homology

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BLAST of mRNA_P-wetherbeei_contig54403.1.1 vs. uniprot
Match: UPI001BABF1AB (DDE-type integrase/transposase/recombinase n=2 Tax=Proteobacteria TaxID=1224 RepID=UPI001BABF1AB)

HSP 1 Score: 353 bits (905), Expect = 1.040e-117
Identity = 172/176 (97.73%), Postives = 173/176 (98.30%), Query Frame = 0

Query:    1 LSLIQIDHTLVDVIVVDSETRAPIQRPWLTLAIDVCTRCVAGFHLSLEPPSATSVALCLSHGALAKDSWLAERRIDAVWPVRGIPERLHLDNAKEFRSEALKRGCEQYGIAIDHRPVRTPHYGGHIERLIGTMMGKVHLLPGTTFSNLQAKGDLIPDKTAAMTLEEVERWLGHAIA 176
            LSLIQIDHTLVDVIVVDSETR  IQRPWLTLAIDVCTRCVAGFHLSLEPPSATSVALCLSHGALAKDSWLAERRIDAVWPVRGIPERLHLDNAKEFRSEALKRGCEQYGIAIDHRPVRTPHYGGHIERLIGTMMGKVHLLPGTTFSN+QAKGDL PDKTAAMTLEEVERWLGHAIA
Sbjct:  169 LSLIQIDHTLVDVIVVDSETRTSIQRPWLTLAIDVCTRCVAGFHLSLEPPSATSVALCLSHGALAKDSWLAERRIDAVWPVRGIPERLHLDNAKEFRSEALKRGCEQYGIAIDHRPVRTPHYGGHIERLIGTMMGKVHLLPGTTFSNVQAKGDLNPDKTAAMTLEEVERWLGHAIA 344

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BLAST of mRNA_P-wetherbeei_contig54403.1.1 vs. uniprot
Match: A0A1Q5SWM5_9BRAD (Integrase n=2 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=A0A1Q5SWM5_9BRAD)

HSP 1 Score: 342 bits (878), Expect = 1.310e-113
Identity = 166/176 (94.32%), Postives = 171/176 (97.16%), Query Frame = 0

Query:    1 LSLIQIDHTLVDVIVVDSETRAPIQRPWLTLAIDVCTRCVAGFHLSLEPPSATSVALCLSHGALAKDSWLAERRIDAVWPVRGIPERLHLDNAKEFRSEALKRGCEQYGIAIDHRPVRTPHYGGHIERLIGTMMGKVHLLPGTTFSNLQAKGDLIPDKTAAMTLEEVERWLGHAIA 176
            LSLIQIDHTLVDVIVVDS TR PIQRPWLTLAIDVCTRCVAGFHLSLEPPSATSVALCLSH AL+K+SWLAER IDAVWPVRGIPERLHLDNAKEFRSEALKRGCEQYGIAIDHRPVRTPHYGGHIERLIGT+MGKVHLLPGTTFSN+QAKGDL PDKTAAMTL+EVERWLGHAIA
Sbjct:  169 LSLIQIDHTLVDVIVVDSVTRMPIQRPWLTLAIDVCTRCVAGFHLSLEPPSATSVALCLSHAALSKESWLAERGIDAVWPVRGIPERLHLDNAKEFRSEALKRGCEQYGIAIDHRPVRTPHYGGHIERLIGTVMGKVHLLPGTTFSNVQAKGDLNPDKTAAMTLDEVERWLGHAIA 344

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BLAST of mRNA_P-wetherbeei_contig54403.1.1 vs. uniprot
Match: A0A2G1YED3_9SPHN (Integrase n=1 Tax=Sphingobium sp. TaxID=1912891 RepID=A0A2G1YED3_9SPHN)

HSP 1 Score: 340 bits (873), Expect = 7.000e-113
Identity = 163/176 (92.61%), Postives = 171/176 (97.16%), Query Frame = 0

Query:    1 LSLIQIDHTLVDVIVVDSETRAPIQRPWLTLAIDVCTRCVAGFHLSLEPPSATSVALCLSHGALAKDSWLAERRIDAVWPVRGIPERLHLDNAKEFRSEALKRGCEQYGIAIDHRPVRTPHYGGHIERLIGTMMGKVHLLPGTTFSNLQAKGDLIPDKTAAMTLEEVERWLGHAIA 176
            LSLIQIDHTLVDVIVVDSETRAPIQRPWLTLAIDVCTRCVAGFHLSLEPPSATSVALCL+H AL K+SWLAER IDAVWPVRG+PERLHLDNAKEFRSEALKRGCEQYGIAIDHRPVRTPHYGGHIERLIGTMMGKVHLLPGTTFSN++ KGDL P+K+AAMTL+EVERWLGHAIA
Sbjct:  169 LSLIQIDHTLVDVIVVDSETRAPIQRPWLTLAIDVCTRCVAGFHLSLEPPSATSVALCLAHAALGKESWLAERGIDAVWPVRGVPERLHLDNAKEFRSEALKRGCEQYGIAIDHRPVRTPHYGGHIERLIGTMMGKVHLLPGTTFSNIREKGDLNPEKSAAMTLDEVERWLGHAIA 344

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BLAST of mRNA_P-wetherbeei_contig54403.1.1 vs. uniprot
Match: A0A521QEE9_9HYPH (Integrase n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A521QEE9_9HYPH)

HSP 1 Score: 340 bits (872), Expect = 1.020e-112
Identity = 165/176 (93.75%), Postives = 172/176 (97.73%), Query Frame = 0

Query:    1 LSLIQIDHTLVDVIVVDSETRAPIQRPWLTLAIDVCTRCVAGFHLSLEPPSATSVALCLSHGALAKDSWLAERRIDAVWPVRGIPERLHLDNAKEFRSEALKRGCEQYGIAIDHRPVRTPHYGGHIERLIGTMMGKVHLLPGTTFSNLQAKGDLIPDKTAAMTLEEVERWLGHAIA 176
            LSLIQIDHTLVDVIVVDSETRAPIQRPWLTLAIDVCTRCVAGFHLSLEPPSATSVALCLSH ALAK+SWLAER IDAVWPVRGIPERLHLDNAKEFRSEALKRGCEQYG+AID+RPVRTPHYGGHIERLIGTMMGKVHLLPGTTFS+++AK DL PDKTAAMTL+EVERWLGHAIA
Sbjct:  169 LSLIQIDHTLVDVIVVDSETRAPIQRPWLTLAIDVCTRCVAGFHLSLEPPSATSVALCLSHVALAKESWLAERGIDAVWPVRGIPERLHLDNAKEFRSEALKRGCEQYGVAIDYRPVRTPHYGGHIERLIGTMMGKVHLLPGTTFSDVRAKSDLNPDKTAAMTLDEVERWLGHAIA 344

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BLAST of mRNA_P-wetherbeei_contig54403.1.1 vs. uniprot
Match: M5EYS5_9HYPH (Integrase, catalytic region n=4 Tax=Hyphomicrobiales TaxID=356 RepID=M5EYS5_9HYPH)

HSP 1 Score: 338 bits (868), Expect = 3.970e-112
Identity = 162/176 (92.05%), Postives = 171/176 (97.16%), Query Frame = 0

Query:    1 LSLIQIDHTLVDVIVVDSETRAPIQRPWLTLAIDVCTRCVAGFHLSLEPPSATSVALCLSHGALAKDSWLAERRIDAVWPVRGIPERLHLDNAKEFRSEALKRGCEQYGIAIDHRPVRTPHYGGHIERLIGTMMGKVHLLPGTTFSNLQAKGDLIPDKTAAMTLEEVERWLGHAIA 176
            LSLIQIDHTLVDV+VVDSETRAPIQRPWLTLAIDVCTRCVAGFHLSLEPPSATSVALCL+H ALAK+SWLAER IDA WPVRGIPERLHLDNAKEFRSEALKRGCEQYGIAIDHRPVRTPHYGGHIERLIGTMMGKVHLLPGTTFS++Q KGDL P+K+AAMT++EVERWLGHAIA
Sbjct:  169 LSLIQIDHTLVDVVVVDSETRAPIQRPWLTLAIDVCTRCVAGFHLSLEPPSATSVALCLTHAALAKESWLAERAIDAEWPVRGIPERLHLDNAKEFRSEALKRGCEQYGIAIDHRPVRTPHYGGHIERLIGTMMGKVHLLPGTTFSSVQEKGDLNPEKSAAMTIDEVERWLGHAIA 344

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BLAST of mRNA_P-wetherbeei_contig54403.1.1 vs. uniprot
Match: A0A7W5Z7L8_9HYPH (Putative transposase n=3 Tax=Hyphomicrobiales TaxID=356 RepID=A0A7W5Z7L8_9HYPH)

HSP 1 Score: 336 bits (862), Expect = 3.280e-111
Identity = 162/176 (92.05%), Postives = 172/176 (97.73%), Query Frame = 0

Query:    1 LSLIQIDHTLVDVIVVDSETRAPIQRPWLTLAIDVCTRCVAGFHLSLEPPSATSVALCLSHGALAKDSWLAERRIDAVWPVRGIPERLHLDNAKEFRSEALKRGCEQYGIAIDHRPVRTPHYGGHIERLIGTMMGKVHLLPGTTFSNLQAKGDLIPDKTAAMTLEEVERWLGHAIA 176
            LSLIQIDHTLVDVIVVDSETRAPIQRPWLTLAIDVC+RCVAGFHLSLEPPSATSVALCL+H AL+K+SWLAER IDA WPVRGIPERLHLDNAKEFRSEALKRGCEQYGIAID+RPVRTPHYGGHIERLIGTMMGKVHLLPGTTFS+++AKGDL P+KTAAMTL+EVERWLGHAIA
Sbjct:  169 LSLIQIDHTLVDVIVVDSETRAPIQRPWLTLAIDVCSRCVAGFHLSLEPPSATSVALCLTHAALSKESWLAERGIDAEWPVRGIPERLHLDNAKEFRSEALKRGCEQYGIAIDYRPVRTPHYGGHIERLIGTMMGKVHLLPGTTFSDVRAKGDLDPEKTAAMTLDEVERWLGHAIA 344

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BLAST of mRNA_P-wetherbeei_contig54403.1.1 vs. uniprot
Match: UPI0018C2D031 (DDE-type integrase/transposase/recombinase n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=UPI0018C2D031)

HSP 1 Score: 336 bits (862), Expect = 3.280e-111
Identity = 162/176 (92.05%), Postives = 170/176 (96.59%), Query Frame = 0

Query:    1 LSLIQIDHTLVDVIVVDSETRAPIQRPWLTLAIDVCTRCVAGFHLSLEPPSATSVALCLSHGALAKDSWLAERRIDAVWPVRGIPERLHLDNAKEFRSEALKRGCEQYGIAIDHRPVRTPHYGGHIERLIGTMMGKVHLLPGTTFSNLQAKGDLIPDKTAAMTLEEVERWLGHAIA 176
            LSLIQIDHTLVDVIVVDSETRAPIQRPWLTLAIDVCTRCVAGFHLSLEPPSATSVALCLSH AL+K+SWLAER IDA WPVRGIPERLHLDNAKEFRSEALKRGCEQYGIAID+RPVRTPHYGGHIERLIGTMMGKVHLLPGTTFS++Q +GDL P KTAAMTL+EVERWLGHA+A
Sbjct:  169 LSLIQIDHTLVDVIVVDSETRAPIQRPWLTLAIDVCTRCVAGFHLSLEPPSATSVALCLSHAALSKESWLAERGIDAEWPVRGIPERLHLDNAKEFRSEALKRGCEQYGIAIDYRPVRTPHYGGHIERLIGTMMGKVHLLPGTTFSDVQERGDLDPQKTAAMTLDEVERWLGHAVA 344

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BLAST of mRNA_P-wetherbeei_contig54403.1.1 vs. uniprot
Match: A0A2A4FPD1_9SPHN (Integrase n=1 Tax=Rhizorhabdus dicambivorans TaxID=1850238 RepID=A0A2A4FPD1_9SPHN)

HSP 1 Score: 336 bits (862), Expect = 3.680e-111
Identity = 160/176 (90.91%), Postives = 170/176 (96.59%), Query Frame = 0

Query:    1 LSLIQIDHTLVDVIVVDSETRAPIQRPWLTLAIDVCTRCVAGFHLSLEPPSATSVALCLSHGALAKDSWLAERRIDAVWPVRGIPERLHLDNAKEFRSEALKRGCEQYGIAIDHRPVRTPHYGGHIERLIGTMMGKVHLLPGTTFSNLQAKGDLIPDKTAAMTLEEVERWLGHAIA 176
            LSLIQIDHTLVDVIVVDSETRAPIQRPWLTLAIDVCTRCVAGFHLSLEPPSATSVA+CL+H AL K++WLA R IDAVWPVRG+PERLHLDNAKEFRSEALKRGCEQYGIAIDHRPVRTPHYGGHIERLIGTMMGKVHLLPGTTFSN++ KGDL P+K+AAMTL+EVERWLGHAIA
Sbjct:  169 LSLIQIDHTLVDVIVVDSETRAPIQRPWLTLAIDVCTRCVAGFHLSLEPPSATSVAMCLAHAALGKETWLATRDIDAVWPVRGVPERLHLDNAKEFRSEALKRGCEQYGIAIDHRPVRTPHYGGHIERLIGTMMGKVHLLPGTTFSNIREKGDLNPEKSAAMTLDEVERWLGHAIA 344

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BLAST of mRNA_P-wetherbeei_contig54403.1.1 vs. uniprot
Match: A0A6N7H5F5_9HYPH (DDE-type integrase/transposase/recombinase (Fragment) n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A6N7H5F5_9HYPH)

HSP 1 Score: 330 bits (847), Expect = 4.130e-109
Identity = 161/176 (91.48%), Postives = 168/176 (95.45%), Query Frame = 0

Query:    1 LSLIQIDHTLVDVIVVDSETRAPIQRPWLTLAIDVCTRCVAGFHLSLEPPSATSVALCLSHGALAKDSWLAERRIDAVWPVRGIPERLHLDNAKEFRSEALKRGCEQYGIAIDHRPVRTPHYGGHIERLIGTMMGKVHLLPGTTFSNLQAKGDLIPDKTAAMTLEEVERWLGHAIA 176
            LSLIQIDHTLVDVIVVDS TR PIQRPWLTLAIDVCTRCVAGFHLSLEPPSATSVALCLSH  L K+SWLAER IDAVWPVRGIPERLHLDNAKEFRSEALKRGCEQYGIAID+RPVRTPHYGGHIERLIGTMMGKVHLLPGTTFS+++AKG+L P KTAAMTL+EVERWLGHAIA
Sbjct:  156 LSLIQIDHTLVDVIVVDSVTRTPIQRPWLTLAIDVCTRCVAGFHLSLEPPSATSVALCLSHVVLTKESWLAERGIDAVWPVRGIPERLHLDNAKEFRSEALKRGCEQYGIAIDYRPVRTPHYGGHIERLIGTMMGKVHLLPGTTFSDIRAKGNLNPYKTAAMTLDEVERWLGHAIA 331

[Close]

BLAST of mRNA_P-wetherbeei_contig54403.1.1 vs. uniprot
Match: A0A2S0QYG0_9RHOO (Integrase n=5 Tax=Proteobacteria TaxID=1224 RepID=A0A2S0QYG0_9RHOO)

HSP 1 Score: 326 bits (836), Expect = 2.710e-107
Identity = 156/176 (88.64%), Postives = 164/176 (93.18%), Query Frame = 0

Query:    1 LSLIQIDHTLVDVIVVDSETRAPIQRPWLTLAIDVCTRCVAGFHLSLEPPSATSVALCLSHGALAKDSWLAERRIDAVWPVRGIPERLHLDNAKEFRSEALKRGCEQYGIAIDHRPVRTPHYGGHIERLIGTMMGKVHLLPGTTFSNLQAKGDLIPDKTAAMTLEEVERWLGHAIA 176
            LSL+QIDHTLVDVIVVDS+TR PIQRPWLTLAIDVCTRCVAG HLSLEPPSATSVALC+S  AL KD+WLAER ID  WPV GIPERLHLDNAKEFRSEAL+RGCEQ+GIAIDHRPVRTPHYGGHIERLIGTMMGKVHLLPGTTFSN+QAKGDL P K+A MTLEEVERWLGHAIA
Sbjct:  170 LSLVQIDHTLVDVIVVDSQTREPIQRPWLTLAIDVCTRCVAGLHLSLEPPSATSVALCISQAALPKDAWLAERGIDGAWPVHGIPERLHLDNAKEFRSEALRRGCEQHGIAIDHRPVRTPHYGGHIERLIGTMMGKVHLLPGTTFSNVQAKGDLDPSKSAVMTLEEVERWLGHAIA 345

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig54403.1.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig54403.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
UPI001BABF1AB	1.040e-117	97.73	DDE-type integrase/transposase/recombinase n=2 Tax...	[more]
A0A1Q5SWM5_9BRAD	1.310e-113	94.32	Integrase n=2 Tax=unclassified Bradyrhizobium TaxI...	[more]
A0A2G1YED3_9SPHN	7.000e-113	92.61	Integrase n=1 Tax=Sphingobium sp. TaxID=1912891 Re...	[more]
A0A521QEE9_9HYPH	1.020e-112	93.75	Integrase n=2 Tax=Hyphomicrobiales TaxID=356 RepID...	[more]
M5EYS5_9HYPH	3.970e-112	92.05	Integrase, catalytic region n=4 Tax=Hyphomicrobial...	[more]
A0A7W5Z7L8_9HYPH	3.280e-111	92.05	Putative transposase n=3 Tax=Hyphomicrobiales TaxI...	[more]
UPI0018C2D031	3.280e-111	92.05	DDE-type integrase/transposase/recombinase n=2 Tax...	[more]
A0A2A4FPD1_9SPHN	3.680e-111	90.91	Integrase n=1 Tax=Rhizorhabdus dicambivorans TaxID...	[more]
A0A6N7H5F5_9HYPH	4.130e-109	91.48	DDE-type integrase/transposase/recombinase (Fragme...	[more]
A0A2S0QYG0_9RHOO	2.710e-107	88.64	Integrase n=5 Tax=Proteobacteria TaxID=1224 RepID=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 2..120 e-value: 3.6E-16 score: 59.3
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 1..176 score: 12.147232
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 1..176 e-value: 3.8E-28 score: 100.9
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 3..144

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig54403	contig	P-wetherbeei_contig54403:3..530 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig54403.1.1	mRNA_P-wetherbeei_contig54403.1.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig54403 3..530 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig54403.1.1 ID=prot_P-wetherbeei_contig54403.1.1|Name=mRNA_P-wetherbeei_contig54403.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=176bp
LSLIQIDHTLVDVIVVDSETRAPIQRPWLTLAIDVCTRCVAGFHLSLEPP
SATSVALCLSHGALAKDSWLAERRIDAVWPVRGIPERLHLDNAKEFRSEA
LKRGCEQYGIAIDHRPVRTPHYGGHIERLIGTMMGKVHLLPGTTFSNLQA
KGDLIPDKTAAMTLEEVERWLGHAIA

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001584	Integrase_cat-core
IPR036397	RNaseH_sf
IPR012337	RNaseH-like_sf