prot_P-wetherbeei_contig542.4.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig542.4.1
Unique Nameprot_P-wetherbeei_contig542.4.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length35
Homology
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BLAST of mRNA_P-wetherbeei_contig542.4.1 vs. uniprot
Match: D8LN18_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN18_ECTSI)

HSP 1 Score: 55.5 bits (132), Expect = 6.390e-8
Identity = 30/35 (85.71%), Postives = 31/35 (88.57%), Query Frame = 0 
Query:    1 GDDEEGLRALRQQLAAVQRIRIEHERKDAIIAALR 35
            G DEEGL  LRQQL+AVQRIRIEHERKDA IAALR
Sbjct:  112 GGDEEGLGLLRQQLSAVQRIRIEHERKDATIAALR 146
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig542.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LN18_ECTSI6.390e-885.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 7..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig542contigP-wetherbeei_contig542:8609..8713 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig542.4.1mRNA_P-wetherbeei_contig542.4.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig542 8609..8713 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig542.4.1 ID=prot_P-wetherbeei_contig542.4.1|Name=mRNA_P-wetherbeei_contig542.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=35bp
GDDEEGLRALRQQLAAVQRIRIEHERKDAIIAALR
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