prot_P-wetherbeei_contig5403.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig5403.1.1
Unique Nameprot_P-wetherbeei_contig5403.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length212
Homology
BLAST of mRNA_P-wetherbeei_contig5403.1.1 vs. uniprot
Match: D7G6L9_ECTSI (BNR repeat domain protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6L9_ECTSI)

HSP 1 Score: 105 bits (263), Expect = 8.380e-23
Identity = 55/150 (36.67%), Postives = 83/150 (55.33%), Query Frame = 0
Query:   64 VVSVAAGSGTSFAVTEAGELFSWGQGRFGALGTGSEADRALPTRLDCFGEKRRSAVAHVSAGRHHSIAIT-RSRRTYVWGDDRFGQLGIGRAQTGNGGRHQNRPVEISWPAVMTPSQTSAGGRHTLCLVEVAGAPPGRETAVFSWGARGH 212
            V  +AAG  +SF VT+ GE++SWG G+FG LG G +  R  P+R+  F E + +    VSAG+ H + +T ++   Y WG + +GQLG     TG  G  +  PV I W    TP + SAG  H++ +V++      R+   ++WG   H
Sbjct:  132 VKELAAGFASSFLVTDFGEVWSWGSGKFGCLGLGDDESRWFPSRIPLFAENQPATAETVSAGKWHVLCLTQKTHEVYAWGRNNWGQLG-----TGEAGECERSPVAIRWTKRETPLKISAGADHSVAMVDLLRPNQRRDIVAYAWGNPDH 276          
BLAST of mRNA_P-wetherbeei_contig5403.1.1 vs. uniprot
Match: A0A7S1CQ37_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CQ37_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 3.960e-21
Identity = 68/208 (32.69%), Postives = 102/208 (49.04%), Query Frame = 0
Query:   15 PCLVSSLP-SPVSAVACGYNHNVFLLVDGSVFAFG------------MAASNGRVAGLDTVRVVSVAAGSGTSFAVTEAGELFSWGQGRFGALGTGSEADRALPTRLDCFGEKRRSAVAHVSAGRHHSIAITRSRRTYVWGDDRFGQLGIGRAQTGNGGRHQNRPVEISWPAVMTPSQTSAGGRHTLCLVEVAGAPPGRETAVFSWGA 209
            P LV+ L  + + +VA G  H   +   G V+ +G            +A + G+V GLD V+V +VA G   + A+T+ G +F+WG GR+GALG GS+AD   P ++D FG +R   +  VS GR H++A+      + WG D  G +  G      G R+   P  +         +  AG +H+L + E           VFSWGA
Sbjct:   96 PRLVAELAGTEIRSVAVGDTHMAAVTATGEVWTWGKPLGGRLGHSNSVAGTPGKVEGLDGVKVAAVACGWNHTVALTDDGRVFTWGIGRYGALGNGSKADSKFPLQVDGFGARR---IVQVSCGRDHTLALADDGSVFAWGSDDNGAVAAG------GARYVTSPQAVRSLRGRKCKRVVAGEQHSLAIAE--------NGDVFSWGA 286          
BLAST of mRNA_P-wetherbeei_contig5403.1.1 vs. uniprot
Match: UPI001E82FE0E (probable E3 ubiquitin-protein ligase HERC6 n=1 Tax=Sphaerodactylus townsendi TaxID=933632 RepID=UPI001E82FE0E)

HSP 1 Score: 96.7 bits (239), Expect = 1.480e-19
Identity = 63/182 (34.62%), Postives = 90/182 (49.45%), Query Frame = 0
Query:   25 VSAVACGYNHNVFLLVDGSVFAFGMAASN--GR--------------VAGLDTVRVVSVAAGSGTSFAVTEAGELFSWGQGRFGALGTGSEADRALPTRLDCFGEKRRSAVAHVSAGRHHSIAITRSRRTYVWGDDRFGQLGIGRAQTGNGGRHQNRPVEISWPAVMTPSQTSAGGRHTLCL 190
            V  VACG  H + L  DGSV + G  A    GR              +  L+   V+ V+ G   S A+   G +FSWG G FG LGTG   DR +P ++D     +   V  V+ G  HSIA+T+  R + WG + +GQLGIG+  + +G     RP  ++    +  +Q +AGG H+  L
Sbjct:   38 VVLVACGERHTLLLHADGSVSSCGDNARGQLGRRLPAGQQRSSVPEQIQALEAQAVIHVSCGKDHSLAICSNGSVFSWGAGTFGQLGTGELKDRLIPKKIDGLSTFK---VIQVACGHSHSIALTKDGRVFSWGQNIYGQLGIGKEVSSHG-----RPQHVTALDGIPLAQVAAGGAHSFAL 211          
BLAST of mRNA_P-wetherbeei_contig5403.1.1 vs. uniprot
Match: A0A6P8SAL9_GEOSA (probable E3 ubiquitin-protein ligase HERC6 isoform X1 n=2 Tax=Geotrypetes seraphini TaxID=260995 RepID=A0A6P8SAL9_GEOSA)

HSP 1 Score: 94.4 bits (233), Expect = 9.340e-19
Identity = 69/199 (34.67%), Postives = 100/199 (50.25%), Query Frame = 0
Query:   25 VSAVACGYNHNVFLLVDGSVFAFGM-------------AASNGRVAGLDTVRVVSVAAGSGTSFAVTEAGELFSWGQGRFGALGTGSEADRAL-PTRLD-CFGEKRRSAVAHVSAGRHHSIAITRSRRTYVWGDDRFGQLGIGRAQTGNGGRHQNRPVEISWPAVMTPSQTSAGGRHTLCLVEVAGAPPGRETAVFSWG 208
            V  VACG  H +FLL DG+V + G               A  G++  L+   ++ V+ G   S AV   G +FSWG G  G LGTG   +++L P ++D  F  K    V  V+ G +HSIA+ +  R Y WG ++ GQLG+G+     G   Q  P  ++    +  +Q +AGG H+L L  ++GA       VF WG
Sbjct:   31 VREVACGSGHCLFLLEDGTVTSCGHNRRGQLGRRSQDGGAQRGQIQALEAQSIIHVSCGKEHSLAVCSRGCVFSWGAGSEGQLGTGQFKEQSLIPKKIDGIFNVK----VIQVACGHYHSIALLKDGRLYSWGQNKNGQLGLGK-----GFSSQASPQRVTSLEGIPLAQVAAGGAHSLAL-SLSGA-------VFGWG 212          
BLAST of mRNA_P-wetherbeei_contig5403.1.1 vs. uniprot
Match: UPI000750010E (probable E3 ubiquitin-protein ligase HERC6 n=1 Tax=Gekko japonicus TaxID=146911 RepID=UPI000750010E)

HSP 1 Score: 93.2 bits (230), Expect = 2.380e-18
Identity = 62/182 (34.07%), Postives = 90/182 (49.45%), Query Frame = 0
Query:   25 VSAVACGYNHNVFLLVDGSVFAFGMAASN--------GR--------VAGLDTVRVVSVAAGSGTSFAVTEAGELFSWGQGRFGALGTGSEADRALPTRLDCFGEKRRSAVAHVSAGRHHSIAITRSRRTYVWGDDRFGQLGIGRAQTGNGGRHQNRPVEISWPAVMTPSQTSAGGRHTLCL 190
            V  VACG  H +FL  DG V + G  A          GR        +  L+   +V V+ G   S AV   G +FSWG G FG LGTG   DR +  +++     +   +  V+ G +HS+A+T+  R + WG + +GQLGIG+ +  + GR Q+ P     P     +Q +AGG H+  L
Sbjct:  160 VVLVACGERHTLFLHPDGGVSSCGDNARGQLGRRLPAGRQRSSRPEQIQALEAQTIVHVSCGKEHSLAVCSNGRVFSWGAGTFGQLGTGELKDRLIAKKIEGLSTCK---IIQVACGHYHSVALTKDGRVFSWGQNSYGQLGIGK-EVSSQGRPQHIPALDGIPL----AQVAAGGAHSFAL 333          
BLAST of mRNA_P-wetherbeei_contig5403.1.1 vs. uniprot
Match: A0A847JRK0_9BACT (Uncharacterized protein n=1 Tax=Chthonomonadales bacterium TaxID=2282151 RepID=A0A847JRK0_9BACT)

HSP 1 Score: 92.8 bits (229), Expect = 2.990e-18
Identity = 66/187 (35.29%), Postives = 96/187 (51.34%), Query Frame = 0
Query:   17 LVSSLPSPVSAVACGYNHNVFLLVDGSVFAFG--------MAASNGRVAGLDTV-----RVVSVAAGSGTSFAVTEAGELFSWGQGRFGALGTGSEADRALPTRLDCFGEKRRSAVAHVSAGRHHSIAITRSRRTYVWGDDRFGQLGIGRAQTGNGGRHQNRPVEISWPAVMTPSQTSAGGRHTLCL 190
            LVS   + V A+A GY H++ LL DG +FA+G        +     R+A ++       RV +V+AG   + A+TE G L++WG    G LG G  + R  P R+        ++V  VSAG HHS+A+T     + WG +  GQLG G  Q+      + RP EI     + PS  +AGG H++ L
Sbjct:  199 LVSGPITGVKAIAGGYGHSMVLLNDGRLFAWGWNGYGQLGLGDKRDRLAPVEVTELLGRRVAAVSAGFAHTLAITEDGALWAWGLNSDGQLGLGDVSPRLAPVRVAGLAH---ASVEAVSAGGHHSLALTADGLAWGWGYNADGQLGTGDTQS------RARPTEIVALRGVRPSMIAAGGFHSMAL 376          
BLAST of mRNA_P-wetherbeei_contig5403.1.1 vs. uniprot
Match: UPI001126289D (probable E3 ubiquitin-protein ligase HERC6 n=1 Tax=Rhinatrema bivittatum TaxID=194408 RepID=UPI001126289D)

HSP 1 Score: 91.3 bits (225), Expect = 1.080e-17
Identity = 65/198 (32.83%), Postives = 97/198 (48.99%), Query Frame = 0
Query:   25 VSAVACGYNHNVFLLVDGSVFAFGM-------------AASNGRVAGLDTVRVVSVAAGSGTSFAVTEAGELFSWGQGRFGALGTGSEADRAL-PTRLDCFGEKRRSAVAHVSAGRHHSIAITRSRRTYVWGDDRFGQLGIGRAQTGNGGRHQNRPVEISWPAVMTPSQTSAGGRHTLCLVEVAGAPPGRETAVFSWG 208
            V  VACG  H +FLL DG+V + G               A  G++  L+   +V V+ G   S AV   G +F+WG G  G LG G   +++L P R+D   + +   V  V+ G +HSIA+ +  R + WG + +GQLG+G+     G   Q  P  +     +  +Q +AGG H+  L  ++GA       VF WG
Sbjct:   38 VQEVACGGRHCLFLLEDGTVTSCGHNQRGQLGRKSRGGGAERGQIQALEAQSIVHVSCGKEHSLAVCSRGHVFAWGAGSEGQLGIGQFKEQSLIPKRIDGIFKVK---VIQVTCGHYHSIALLKDGRVFSWGQNNYGQLGLGK-----GFGSQVSPQRVMSLEGIPLAQVAAGGMHSFAL-SLSGA-------VFGWG 219          
BLAST of mRNA_P-wetherbeei_contig5403.1.1 vs. uniprot
Match: A0A7N6FAA9_ANATE (HECT and RLD domain containing E3 ubiquitin protein ligase 3 n=1 Tax=Anabas testudineus TaxID=64144 RepID=A0A7N6FAA9_ANATE)

HSP 1 Score: 90.5 bits (223), Expect = 1.920e-17
Identity = 69/217 (31.80%), Postives = 106/217 (48.85%), Query Frame = 0
Query:    4 GLELPAVARPNPCLVSSLPSPVSAVACGYNHNVFLLVDGSVFAFGM-----------AASNGRVAGLDTVRVVSVAAGSGTSFAVTEAGELFSWGQGRFGALGTGS-EADRALPTRLDCFGEKRRSAVAHVSAGRHHSIAITRSRRTYVWGDDRFGQLGIGRAQTGNGGRHQNRPVEISWPAVMTPSQTSAGGRHTLCLVEVAGAPPGRETAVFSWG 208
            G+E  AV  P  C V S    +  +ACG+ H++FLL DGSV+  G             AS   V  LDT ++  V++G     A+ E G++F+WG G  G LG G+ E    +P  L    + +   ++ V  G  H IA++R  + + WG +  GQLG+G+ +      H  + +     A +  +Q +AGG H+  L  ++GA       VF WG
Sbjct:   15 GVERNAVLEPRNCHVFSGRG-LKEIACGWQHSMFLLRDGSVYTCGSNSCGQLGHDKPGASPELVVALDTQKITMVSSGRAHCVAINEQGQVFAWGAGEGGQLGLGTTETVVRIPRLLKRLCDHQ---ISQVMCGNQHCIALSRDGQLFTWGQNTSGQLGLGKGEPSKLFPHPLKSL-----AGIPLAQITAGGDHSFAL-SLSGA-------VFGWG 214          
BLAST of mRNA_P-wetherbeei_contig5403.1.1 vs. uniprot
Match: A0A7N6BZ48_ANATE (HECT and RLD domain containing E3 ubiquitin protein ligase 3 n=1 Tax=Anabas testudineus TaxID=64144 RepID=A0A7N6BZ48_ANATE)

HSP 1 Score: 90.5 bits (223), Expect = 1.920e-17
Identity = 69/217 (31.80%), Postives = 106/217 (48.85%), Query Frame = 0
Query:    4 GLELPAVARPNPCLVSSLPSPVSAVACGYNHNVFLLVDGSVFAFGM-----------AASNGRVAGLDTVRVVSVAAGSGTSFAVTEAGELFSWGQGRFGALGTGS-EADRALPTRLDCFGEKRRSAVAHVSAGRHHSIAITRSRRTYVWGDDRFGQLGIGRAQTGNGGRHQNRPVEISWPAVMTPSQTSAGGRHTLCLVEVAGAPPGRETAVFSWG 208
            G+E  AV  P  C V S    +  +ACG+ H++FLL DGSV+  G             AS   V  LDT ++  V++G     A+ E G++F+WG G  G LG G+ E    +P  L    + +   ++ V  G  H IA++R  + + WG +  GQLG+G+ +      H  + +     A +  +Q +AGG H+  L  ++GA       VF WG
Sbjct:   15 GVERNAVLEPRNCHVFSGRG-LKEIACGWQHSMFLLRDGSVYTCGSNSCGQLGHDKPGASPELVVALDTQKITMVSSGRAHCVAINEQGQVFAWGAGEGGQLGLGTTETVVRIPRLLKRLCDHQ---ISQVMCGNQHCIALSRDGQLFTWGQNTSGQLGLGKGEPSKLFPHPLKSL-----AGIPLAQITAGGDHSFAL-SLSGA-------VFGWG 214          
BLAST of mRNA_P-wetherbeei_contig5403.1.1 vs. uniprot
Match: A0A7N6AXP3_ANATE (HECT and RLD domain containing E3 ubiquitin protein ligase 3 n=1 Tax=Anabas testudineus TaxID=64144 RepID=A0A7N6AXP3_ANATE)

HSP 1 Score: 90.5 bits (223), Expect = 1.960e-17
Identity = 69/217 (31.80%), Postives = 106/217 (48.85%), Query Frame = 0
Query:    4 GLELPAVARPNPCLVSSLPSPVSAVACGYNHNVFLLVDGSVFAFGM-----------AASNGRVAGLDTVRVVSVAAGSGTSFAVTEAGELFSWGQGRFGALGTGS-EADRALPTRLDCFGEKRRSAVAHVSAGRHHSIAITRSRRTYVWGDDRFGQLGIGRAQTGNGGRHQNRPVEISWPAVMTPSQTSAGGRHTLCLVEVAGAPPGRETAVFSWG 208
            G+E  AV  P  C V S    +  +ACG+ H++FLL DGSV+  G             AS   V  LDT ++  V++G     A+ E G++F+WG G  G LG G+ E    +P  L    + +   ++ V  G  H IA++R  + + WG +  GQLG+G+ +      H  + +     A +  +Q +AGG H+  L  ++GA       VF WG
Sbjct:   15 GVERNAVLEPRNCHVFSGRG-LKEIACGWQHSMFLLRDGSVYTCGSNSCGQLGHDKPGASPELVVALDTQKITMVSSGRAHCVAINEQGQVFAWGAGEGGQLGLGTTETVVRIPRLLKRLCDHQ---ISQVMCGNQHCIALSRDGQLFTWGQNTSGQLGLGKGEPSKLFPHPLKSL-----AGIPLAQITAGGDHSFAL-SLSGA-------VFGWG 214          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5403.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6L9_ECTSI8.380e-2336.67BNR repeat domain protein n=2 Tax=Ectocarpus TaxID... [more]
A0A7S1CQ37_9STRA3.960e-2132.69Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
UPI001E82FE0E1.480e-1934.62probable E3 ubiquitin-protein ligase HERC6 n=1 Tax... [more]
A0A6P8SAL9_GEOSA9.340e-1934.67probable E3 ubiquitin-protein ligase HERC6 isoform... [more]
UPI000750010E2.380e-1834.07probable E3 ubiquitin-protein ligase HERC6 n=1 Tax... [more]
A0A847JRK0_9BACT2.990e-1835.29Uncharacterized protein n=1 Tax=Chthonomonadales b... [more]
UPI001126289D1.080e-1732.83probable E3 ubiquitin-protein ligase HERC6 n=1 Tax... [more]
A0A7N6FAA9_ANATE1.920e-1731.80HECT and RLD domain containing E3 ubiquitin protei... [more]
A0A7N6BZ48_ANATE1.920e-1731.80HECT and RLD domain containing E3 ubiquitin protei... [more]
A0A7N6AXP3_ANATE1.960e-1731.80HECT and RLD domain containing E3 ubiquitin protei... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3D2.130.10.30coord: 2..212
e-value: 3.7E-43
score: 149.8
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IISUPERFAMILY50985RCC1/BLIP-IIcoord: 14..208
IPR000408Regulator of chromosome condensation, RCC1PFAMPF00415RCC1coord: 138..190
e-value: 1.5E-6
score: 28.7
coord: 81..132
e-value: 7.9E-11
score: 42.4
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS00626RCC1_2coord: 122..132
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 136..193
score: 11.167399
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 1..41
score: 8.675
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 81..135
score: 15.9512
NoneNo IPR availablePANTHERPTHR22870:SF408CLARET, ISOFORM Acoord: 64..210
coord: 23..152
NoneNo IPR availablePANTHERPTHR22870REGULATOR OF CHROMOSOME CONDENSATIONcoord: 64..210
coord: 23..152

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5403contigP-wetherbeei_contig5403:242..877 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5403.1.1mRNA_P-wetherbeei_contig5403.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig5403 242..877 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig5403.1.1 ID=prot_P-wetherbeei_contig5403.1.1|Name=mRNA_P-wetherbeei_contig5403.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=212bp
GRQGLELPAVARPNPCLVSSLPSPVSAVACGYNHNVFLLVDGSVFAFGMA
ASNGRVAGLDTVRVVSVAAGSGTSFAVTEAGELFSWGQGRFGALGTGSEA
DRALPTRLDCFGEKRRSAVAHVSAGRHHSIAITRSRRTYVWGDDRFGQLG
IGRAQTGNGGRHQNRPVEISWPAVMTPSQTSAGGRHTLCLVEVAGAPPGR
ETAVFSWGARGH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009091RCC1/BLIP-II
IPR000408Reg_chr_condens