prot_P-wetherbeei_contig54013.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig54013.1.1
Unique Nameprot_P-wetherbeei_contig54013.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length177
Homology
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BLAST of mRNA_P-wetherbeei_contig54013.1.1 vs. uniprot
Match: A0A450S405_9GAMM (WD40 repeat n=1 Tax=Candidatus Kentron sp. FW TaxID=2126338 RepID=A0A450S405_9GAMM)

HSP 1 Score: 58.5 bits (140), Expect = 8.160e-7
Identity = 38/90 (42.22%), Postives = 51/90 (56.67%), Query Frame = 0 
Query:   92 QRGSPAAVDILGGGSDVLLALAFSPDGRRLLETSTDGFARVWDLENAT-------LVTRFRIGSSGAFNEG------SAAFSPDGSPILT 168
            Q  + A + +L G SDV+L+LAFSPDG+RLL  S DG AR+WDL  A        L T  + G +     G      + AFSPDG+ ++T
Sbjct:  101 QAPADAPLRLLEGHSDVILSLAFSPDGQRLLSGSGDGTARLWDLSTALEAGVSTPLDTGLQTGKTLKILRGHEAPIYAVAFSPDGARLVT 190
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BLAST of mRNA_P-wetherbeei_contig54013.1.1 vs. uniprot
Match: A0A496B0Q7_9BACT (Uncharacterized protein n=1 Tax=Candidatus Poribacteria bacterium TaxID=2026781 RepID=A0A496B0Q7_9BACT)

HSP 1 Score: 55.5 bits (132), Expect = 9.190e-6
Identity = 47/177 (26.55%), Postives = 73/177 (41.24%), Query Frame = 0 
Query:    1 VWNIAESRRVRTITYDDNRSILSLAFSPNGQFVLLGTTGARADVWSVTSGGGPAESYAFSDLSSKAVTEIAMSPDLSRIMMADEAGGIFGFQRGSPAAVDILGGGSDVLLALAFSPDGRRLLETSTDGFARVWDLENATLVTRFRIGSSGAFNEGSAAFSPDGSPILTRPPGAARLW 177
            +W++A+      +    N  + S A  PNG+ +L         VW +         +   +  S+   +   +P   +I +    G I+ +    P     L G +D   ALAFSPDG+RL+  + D  ARVWD+E    +    IG          AFSP G+ I+       R W
Sbjct:  617 LWDVAKKGMQGNLF--KNEWVGSFAVLPNGR-ILASCASEEGSVWEIKQPDNSIAEFTVPEEPSQWARDAVFAPTGDQIAVGSRKGTIYVWNFEEPEHPIQLTGHTDHTWALAFSPDGKRLVSGADDNTARVWDIELGEEIAILSIGEP--CTPMGFAFSPCGALIVGGLNNEIRFW 788
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54013.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A450S405_9GAMM8.160e-742.22WD40 repeat n=1 Tax=Candidatus Kentron sp. FW TaxI... [more]
A0A496B0Q7_9BACT9.190e-626.55Uncharacterized protein n=1 Tax=Candidatus Poribac... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 6..46
e-value: 4.4
score: 13.0
coord: 95..134
e-value: 0.057
score: 22.5
IPR001680WD40 repeatPFAMPF00400WD40coord: 106..134
e-value: 0.013
score: 16.3
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 102..143
score: 12.881143
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..177
e-value: 8.8E-26
score: 92.5
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 102..137
score: 9.968326
NoneNo IPR availableSUPERFAMILY82171DPP6 N-terminal domain-likecoord: 1..165

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig54013contigP-wetherbeei_contig54013:3..533 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig54013.1.1mRNA_P-wetherbeei_contig54013.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig54013 3..533 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig54013.1.1 ID=prot_P-wetherbeei_contig54013.1.1|Name=mRNA_P-wetherbeei_contig54013.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=177bp
VWNIAESRRVRTITYDDNRSILSLAFSPNGQFVLLGTTGARADVWSVTSG
GGPAESYAFSDLSSKAVTEIAMSPDLSRIMMADEAGGIFGFQRGSPAAVD
ILGGGSDVLLALAFSPDGRRLLETSTDGFARVWDLENATLVTRFRIGSSG
AFNEGSAAFSPDGSPILTRPPGAARLW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf