prot_P-wetherbeei_contig54.4.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig54.4.1
Unique Nameprot_P-wetherbeei_contig54.4.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length213
Homology
BLAST of mRNA_P-wetherbeei_contig54.4.1 vs. uniprot
Match: A0A8J4BSI1_9CHLO (Uncharacterized protein n=3 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4BSI1_9CHLO)

HSP 1 Score: 98.2 bits (243), Expect = 4.630e-20
Identity = 62/173 (35.84%), Postives = 89/173 (51.45%), Query Frame = 0
Query:   50 AAAATGGPLPSSAADALEGREATEWMAAMQEE---------WHNVPSPAGHGGTGGGHNVIGCRWVFARKRASDETILRYRVRLVAQGFAQRPGVDYGATFARVMHVGGLNAISPCTGGSVQLRGEPDGVVTAYLNAPLEEMLWMRRPPGPLGGFDDCVALQVLKAIDGLKQA 213
            AA   G P P++ A+A+   +A EW  AM +E         W     P G         ++ CRWV+  K  +D ++ R++ RLVA+G+ QR G+DYG  FA       L A+         +  + D V TA+LN  LEE LWM++PPG     D  +A ++ K+I GLKQA
Sbjct:  806 AAVTAGIPEPNTYAEAMTSMQAEEWHRAMDDEIEAQLANGTWELAKPPPGV-------KLLPCRWVYKVKHNADGSVERFKARLVAKGYEQRAGIDYGELFAPTSRFASLRALLAVAAAKKMIVHQMD-VSTAFLNGELEEELWMQQPPG-YESQDKTLACRLQKSIYGLKQA 969          
BLAST of mRNA_P-wetherbeei_contig54.4.1 vs. uniprot
Match: A0A8J4LU19_9CHLO (Integrase catalytic domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4LU19_9CHLO)

HSP 1 Score: 97.8 bits (242), Expect = 5.590e-20
Identity = 62/173 (35.84%), Postives = 88/173 (50.87%), Query Frame = 0
Query:   50 AAAATGGPLPSSAADALEGREATEWMAAMQEE---------WHNVPSPAGHGGTGGGHNVIGCRWVFARKRASDETILRYRVRLVAQGFAQRPGVDYGATFARVMHVGGLNAISPCTGGSVQLRGEPDGVVTAYLNAPLEEMLWMRRPPGPLGGFDDCVALQVLKAIDGLKQA 213
            AA   G P P++ A+A+ G++A EW  AM EE         W     P G         ++ CRWV+  K  +D ++ R++ RLVA+G+ QR G+DYG  FA       L A+            + D V TA+LN  L+E LWM +PPG     D   A ++ ++I GLKQA
Sbjct:  491 AAVNPGIPEPNTYAEAMAGQQAEEWQRAMDEEIEAQLANGTWELATPPPGT-------KLLPCRWVYKVKHNADGSVERFKARLVAKGYEQRAGIDYGELFAPTSRFASLRALLAAAAAKKMTVHQMD-VSTAFLNGELKEELWMEQPPG-YQSDDKAQACRLRRSIYGLKQA 654          
BLAST of mRNA_P-wetherbeei_contig54.4.1 vs. uniprot
Match: A0A8J4D5M1_9CHLO (Integrase catalytic domain-containing protein n=2 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4D5M1_9CHLO)

HSP 1 Score: 97.8 bits (242), Expect = 5.990e-20
Identity = 67/173 (38.73%), Postives = 89/173 (51.45%), Query Frame = 0
Query:   51 AAATGG-PLPSSAADALEGREATEWMAAMQEE---------WHNVPSPAGHGGTGGGHNVIGCRWVFARKRASDETILRYRVRLVAQGFAQRPGVDYGATFARVMHVGGLNAISPCTGGSVQLRGEPDGVVTAYLNAPLEEMLWMRRPPGPLGGFDDCVALQVLKAIDGLKQA 213
            AA+TG  P PS+ A+A  G  A EW  AM EE         W     P G         ++ CRWV+  KR +D  I R++ RLVA+G+ QR G+DYG  FA       L A+            + D V TA+LN  LEE LWM++PPG     D  +A ++ ++I GLKQA
Sbjct:  425 AASTGEIPEPSTYAEATNGPHAEEWKKAMDEEIAAQLANGTWELARPPEGT-------RLLPCRWVYKVKRGADGEIERFKARLVAKGYEQRAGIDYGQLFAPTSRFASLRALLAVAAAKGMPIHQLD-VSTAFLNGELEEELWMQQPPG-YESKDPNLACRLKRSIYGLKQA 588          
BLAST of mRNA_P-wetherbeei_contig54.4.1 vs. uniprot
Match: A0A8J4CMR0_9CHLO (Uncharacterized protein n=3 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4CMR0_9CHLO)

HSP 1 Score: 97.8 bits (242), Expect = 6.300e-20
Identity = 62/173 (35.84%), Postives = 88/173 (50.87%), Query Frame = 0
Query:   50 AAAATGGPLPSSAADALEGREATEWMAAMQEE---------WHNVPSPAGHGGTGGGHNVIGCRWVFARKRASDETILRYRVRLVAQGFAQRPGVDYGATFARVMHVGGLNAISPCTGGSVQLRGEPDGVVTAYLNAPLEEMLWMRRPPGPLGGFDDCVALQVLKAIDGLKQA 213
            AA   G P P++ A+A+ G++A EW  AM EE         W     P G         ++ CRWV+  K  +D ++ R++ RLVA+G+ QR G+DYG  FA       L A+            + D V TA+LN  L+E LWM +PPG     D   A ++ ++I GLKQA
Sbjct:  808 AAVNPGIPEPNTYAEAMAGQQAEEWQRAMDEEIEAQLANGTWELATPPPGT-------KLLPCRWVYKVKHNADGSVERFKARLVAKGYEQRAGIDYGELFAPTSRFASLRALLAAAAAKKMTVHQMD-VSTAFLNGELKEELWMEQPPG-YQSDDKAQACRLRRSIYGLKQA 971          
BLAST of mRNA_P-wetherbeei_contig54.4.1 vs. uniprot
Match: A0A8J4G2Q3_9CHLO (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4G2Q3_9CHLO)

HSP 1 Score: 96.7 bits (239), Expect = 8.990e-20
Identity = 67/173 (38.73%), Postives = 88/173 (50.87%), Query Frame = 0
Query:   51 AAATGG-PLPSSAADALEGREATEWMAAMQEE---------WHNVPSPAGHGGTGGGHNVIGCRWVFARKRASDETILRYRVRLVAQGFAQRPGVDYGATFARVMHVGGLNAISPCTGGSVQLRGEPDGVVTAYLNAPLEEMLWMRRPPGPLGGFDDCVALQVLKAIDGLKQA 213
            AA+TG  P PS+ A+A  G  A EW  AM EE         W     P G         ++ CRWV+  KR +D  I R++ RLVA+G+ QR G+DYG  FA       L A+            + D V TA+LN  LEE LWM++PPG     D   A ++ ++I GLKQA
Sbjct:   94 AASTGEIPEPSTYAEATNGPHAEEWKKAMDEEIAAQLANGTWELARPPEGT-------RLLPCRWVYKVKRGADGEIERFKARLVAKGYEQRAGIDYGELFAPTSRFASLRALLAVAAAKGMPIHQLD-VSTAFLNGELEEELWMQQPPG-YESKDPNQACRLKRSIYGLKQA 257          
BLAST of mRNA_P-wetherbeei_contig54.4.1 vs. uniprot
Match: A0A182H9B7_AEDAL (Integrase catalytic domain-containing protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182H9B7_AEDAL)

HSP 1 Score: 97.1 bits (240), Expect = 1.010e-19
Identity = 65/166 (39.16%), Postives = 83/166 (50.00%), Query Frame = 0
Query:   57 PLPSSAADALEGREATEWMAAMQEE---------WHNVPSPAGHGGTGGGHNVIGCRWVFARKRASDETILRYRVRLVAQGFAQRPGVDYGATFARVMHVGGLNAISPCTGGSVQLRGEPDGVVTAYLNAPLEEMLWMRRPPGPLGGFDDCVALQVLKAIDGLKQA 213
            P P +  +A+E  E   W AA++EE         W  VP PAG          IGC+W+F RK      ++RY+ RLVAQGF Q+ G DY   FA V+      A+         L    D V TAYLN  L+EM++MR PPG   G D  +   + K I GLKQA
Sbjct:  398 PEPHTIKEAMESTEKDLWKAAIKEELQAHEENGTWKVVPLPAGR-------KTIGCKWIFKRKEDEKGNVVRYKARLVAQGFTQKYGTDYDEVFAPVVKQVTFKALLSVAHQRKMLIKHID-VKTAYLNGELQEMVFMRPPPGCDFG-DSKLVCHLQKGIYGLKQA 554          
BLAST of mRNA_P-wetherbeei_contig54.4.1 vs. uniprot
Match: A0A8J4CIC3_9CHLO (Integrase catalytic domain-containing protein n=2 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4CIC3_9CHLO)

HSP 1 Score: 97.1 bits (240), Expect = 1.070e-19
Identity = 63/166 (37.95%), Postives = 84/166 (50.60%), Query Frame = 0
Query:   57 PLPSSAADALEGREATEWMAAMQEE---------WHNVPSPAGHGGTGGGHNVIGCRWVFARKRASDETILRYRVRLVAQGFAQRPGVDYGATFARVMHVGGLNAISPCTGGSVQLRGEPDGVVTAYLNAPLEEMLWMRRPPGPLGGFDDCVALQVLKAIDGLKQA 213
            P PS+ A+A+ G  + EW  AM EE         W     P G         ++ CRWV+  KR +D  I R++ RLVA+G+ QR G+DYG  FA       L A+            + D V TA+LN  LEE LWM++PPG     D   A ++ K+I GLKQA
Sbjct:  304 PEPSTYAEAINGPNSEEWKRAMDEEIAAQLSNGTWELAKPPEGT-------RLLPCRWVYKVKRGADGGIERFKARLVAKGYEQRAGIDYGELFAPTTRSASLRALLAVAATKGMPIHQLD-VSTAFLNGELEEELWMQQPPG-YESADPTQACRLKKSIYGLKQA 460          
BLAST of mRNA_P-wetherbeei_contig54.4.1 vs. uniprot
Match: A0A1M2V3W8_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2V3W8_TRAPU)

HSP 1 Score: 97.1 bits (240), Expect = 1.090e-19
Identity = 64/157 (40.76%), Postives = 84/157 (53.50%), Query Frame = 0
Query:   59 PSSAADALEGREATEWMAAMQEEWHNVPSPAGHGGTG--GGHNVIGCRWVFARKRASDETILRYRVRLVAQGFAQRPGVDYGATFARVMHVGGLNAISPCTGGSVQLRGEPDGVVTAYLNAPLEEMLWMRRPPGPLGGFDDCVALQVLKAIDGLKQA 213
            P + ++A    E  EW  AM +E   +     +       G   IGCRWV+  KR SD  I+RY+ RLVAQGF+Q PG+DY  TFA V+    L  +            + D VV AYLNA L+E ++MR+PPG   G    V L+  KA+ GLKQA
Sbjct:   15 PRTLSEAQAAPEWPEWKRAMDDEIAQLRKLGTYAPADLPAGRKPIGCRWVYRLKRDSDGRIVRYKARLVAQGFSQAPGLDYFETFAPVIRTDSLRLLLAIAAERNMELAQFD-VVGAYLNADLDEEIYMRQPPGYEEGSSPIVRLR--KALYGLKQA 168          
BLAST of mRNA_P-wetherbeei_contig54.4.1 vs. uniprot
Match: A0A8J4GR11_9CHLO (Integrase catalytic domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4GR11_9CHLO)

HSP 1 Score: 97.1 bits (240), Expect = 1.110e-19
Identity = 60/165 (36.36%), Postives = 84/165 (50.91%), Query Frame = 0
Query:   58 LPSSAADALEGREATEWMAAMQEE---------WHNVPSPAGHGGTGGGHNVIGCRWVFARKRASDETILRYRVRLVAQGFAQRPGVDYGATFARVMHVGGLNAISPCTGGSVQLRGEPDGVVTAYLNAPLEEMLWMRRPPGPLGGFDDCVALQVLKAIDGLKQA 213
            +P +  +A+ G  A +W  AM+EE         W     P G         ++ CRWV+  K+     I R++ RLVA+GF QR G+DYG  FA       L A+   T  +  +      V TA+LN  LEE LWMR+PPG  G  D   A ++L+++ GLKQA
Sbjct:  453 IPQTFDEAVSGPHAAQWWQAMEEEMAAQYDNHTWELAKPPPGA-------KILPCRWVYTLKKNEAGGIERFKARLVAKGFEQREGIDYGELFAPTTRFASLRALL-ATAAARGMHVHQLDVSTAFLNGELEEELWMRQPPG-FGAEDKTNACRLLRSLYGLKQA 608          
BLAST of mRNA_P-wetherbeei_contig54.4.1 vs. uniprot
Match: A0A8J4LMB2_9CHLO (Uncharacterized protein n=21 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4LMB2_9CHLO)

HSP 1 Score: 97.1 bits (240), Expect = 1.170e-19
Identity = 63/166 (37.95%), Postives = 84/166 (50.60%), Query Frame = 0
Query:   57 PLPSSAADALEGREATEWMAAMQEE---------WHNVPSPAGHGGTGGGHNVIGCRWVFARKRASDETILRYRVRLVAQGFAQRPGVDYGATFARVMHVGGLNAISPCTGGSVQLRGEPDGVVTAYLNAPLEEMLWMRRPPGPLGGFDDCVALQVLKAIDGLKQA 213
            P PS+ A+A+ G  + EW  AM EE         W     P G         ++ CRWV+  KR +D  I R++ RLVA+G+ QR G+DYG  FA       L A+            + D V TA+LN  LEE LWM++PPG     D   A ++ K+I GLKQA
Sbjct:  858 PEPSTYAEAINGPNSEEWKRAMDEEIAAQLSNGTWELAKPPEGT-------RLLPCRWVYKVKRGADGGIERFKARLVAKGYEQRAGIDYGELFAPTTRSASLRALLAVAATKGMPIHQLD-VSTAFLNGELEEELWMQQPPG-YESADPTQACRLKKSIYGLKQA 1014          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8J4BSI1_9CHLO4.630e-2035.84Uncharacterized protein n=3 Tax=Volvox africanus T... [more]
A0A8J4LU19_9CHLO5.590e-2035.84Integrase catalytic domain-containing protein n=1 ... [more]
A0A8J4D5M1_9CHLO5.990e-2038.73Integrase catalytic domain-containing protein n=2 ... [more]
A0A8J4CMR0_9CHLO6.300e-2035.84Uncharacterized protein n=3 Tax=Volvox reticulifer... [more]
A0A8J4G2Q3_9CHLO8.990e-2038.73Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A182H9B7_AEDAL1.010e-1939.16Integrase catalytic domain-containing protein n=1 ... [more]
A0A8J4CIC3_9CHLO1.070e-1937.95Integrase catalytic domain-containing protein n=2 ... [more]
A0A1M2V3W8_TRAPU1.090e-1940.76Retrovirus-related Pol polyprotein from transposon... [more]
A0A8J4GR11_9CHLO1.110e-1936.36Integrase catalytic domain-containing protein n=1 ... [more]
A0A8J4LMB2_9CHLO1.170e-1937.95Uncharacterized protein n=21 Tax=Volvox reticulife... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 97..213
e-value: 1.7E-15
score: 57.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig54contigP-wetherbeei_contig54:6325..6963 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig54.4.1mRNA_P-wetherbeei_contig54.4.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig54 6325..6963 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig54.4.1 ID=prot_P-wetherbeei_contig54.4.1|Name=mRNA_P-wetherbeei_contig54.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=213bp
AAETAELPALDGVWTELSSPTGVRNLAFPILLASEAQEYSATTVEVIAAA
AAATGGPLPSSAADALEGREATEWMAAMQEEWHNVPSPAGHGGTGGGHNV
IGCRWVFARKRASDETILRYRVRLVAQGFAQRPGVDYGATFARVMHVGGL
NAISPCTGGSVQLRGEPDGVVTAYLNAPLEEMLWMRRPPGPLGGFDDCVA
LQVLKAIDGLKQA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2