prot_P-wetherbeei_contig54.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig54.3.1
Unique Nameprot_P-wetherbeei_contig54.3.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length133
Homology
BLAST of mRNA_P-wetherbeei_contig54.3.1 vs. uniprot
Match: W7SYU7_9STRA (Putative polyprotein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7SYU7_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 2.500e-11
Identity = 35/82 (42.68%), Postives = 49/82 (59.76%), Query Frame = 0
Query:   26 GLSVTAPTPIHEDNKPCSYNPTNLFSERRVKHIDIKFHIVRKRVESGEVLLVAIWMKDQIADLFTKPLPTPRTRFRREQILG 107
            G     PT I EDN+ C     N  + +R KHID+++H VR++VES EV LV I  + Q+AD+ TKPL   R    R +++G
Sbjct:   53 GFKQDEPTVIMEDNQACIAMGNNPITHKRTKHIDVRYHFVREKVESKEVELVYIPTQHQLADILTKPLSNIRLAMIRNRMMG 134          
BLAST of mRNA_P-wetherbeei_contig54.3.1 vs. uniprot
Match: W7TF74_9STRA (Gag-pol polyprotein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TF74_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 2.570e-11
Identity = 36/82 (43.90%), Postives = 49/82 (59.76%), Query Frame = 0
Query:   26 GLSVTAPTPIHEDNKPCSYNPTNLFSERRVKHIDIKFHIVRKRVESGEVLLVAIWMKDQIADLFTKPLPTPRTRFRREQILG 107
            G     PT I EDN+ C     N  + +R KHID++FH VR +VES EV LV I  + Q+AD+ TKPL + R    R +++G
Sbjct:  224 GFKQDKPTVIMEDNQACIAMSNNPITHKRTKHIDVRFHFVRGKVESKEVELVYIPTQHQLADILTKPLSSIRLAMIRNRMMG 305          
BLAST of mRNA_P-wetherbeei_contig54.3.1 vs. uniprot
Match: W7T0D1_9STRA (Gag-pol polyprotein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T0D1_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 2.940e-11
Identity = 36/85 (42.35%), Postives = 50/85 (58.82%), Query Frame = 0
Query:   26 GLSVTAPTPIHEDNKPCSYNPTNLFSERRVKHIDIKFHIVRKRVESGEVLLVAIWMKDQIADLFTKPLPTPRTRFRREQILGEYY 110
            G     PT I EDN+ C     N   ++R KHID+++H VR++VES EV LV I  + Q+AD+ TKPL   R    R +++G  Y
Sbjct:  630 GFKQDEPTVIMEDNQACIAMSNNPIIQKRTKHIDVRYHFVREKVESKEVELVYIPTQHQLADILTKPLSNIRLAMIRNRMMGYKY 714          
BLAST of mRNA_P-wetherbeei_contig54.3.1 vs. uniprot
Match: W7TJ26_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJ26_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 5.430e-11
Identity = 35/82 (42.68%), Postives = 50/82 (60.98%), Query Frame = 0
Query:   26 GLSVTAPTPIHEDNKPCSYNPTNLFSERRVKHIDIKFHIVRKRVESGEVLLVAIWMKDQIADLFTKPLPTPRTRFRREQILG 107
            G     PT I EDN+ C     N  + +R KHID+++H VR++VES EV LV I  + Q+AD+ TKPL + R    R +++G
Sbjct:  629 GFKQDEPTVIMEDNQACIAMGNNPITHKRTKHIDVRYHFVREKVESKEVELVYIPTQHQLADILTKPLSSIRLAMIRNRMMG 710          
BLAST of mRNA_P-wetherbeei_contig54.3.1 vs. uniprot
Match: UPI000900DB5B (uncharacterized protein LOC109171181 n=1 Tax=Ipomoea nil TaxID=35883 RepID=UPI000900DB5B)

HSP 1 Score: 68.2 bits (165), Expect = 7.930e-11
Identity = 33/80 (41.25%), Postives = 49/80 (61.25%), Query Frame = 0
Query:   26 GLSVTAPTPIHEDNKPCSYNPTNLFSERRVKHIDIKFHIVRKRVESGEVLLVAIWMKDQIADLFTKPLPTPRTRFRREQI 105
            GL   +PT +  DN   +Y   N     R KH++I +H VR +V SGE ++  +  KDQ+AD+FTKPLP PR +  R+++
Sbjct:  225 GLHSGSPTTLWCDNLGATYLAANPVFHARTKHVEIDYHFVRDKVASGEFIVSFVSTKDQLADIFTKPLPAPRYQALRDKL 304          
BLAST of mRNA_P-wetherbeei_contig54.3.1 vs. uniprot
Match: UPI000900909F (uncharacterized protein LOC109149443 n=1 Tax=Ipomoea nil TaxID=35883 RepID=UPI000900909F)

HSP 1 Score: 66.2 bits (160), Expect = 1.430e-10
Identity = 33/80 (41.25%), Postives = 46/80 (57.50%), Query Frame = 0
Query:   26 GLSVTAPTPIHEDNKPCSYNPTNLFSERRVKHIDIKFHIVRKRVESGEVLLVAIWMKDQIADLFTKPLPTPRTRFRREQI 105
            GL    P  +  DN   +Y  TN     R KH++I FH VR +V SGE ++  +  KDQ+AD+FTKPLP P     R+++
Sbjct:  136 GLHTGDPATLWCDNLGATYLATNPVLHARTKHVEIDFHFVRDKVASGEFVVNFVSTKDQVADIFTKPLPAPHFHTLRDKL 215          
BLAST of mRNA_P-wetherbeei_contig54.3.1 vs. uniprot
Match: UPI000900F791 (uncharacterized protein LOC109173501 n=3 Tax=Ipomoea nil TaxID=35883 RepID=UPI000900F791)

HSP 1 Score: 67.0 bits (162), Expect = 1.670e-10
Identity = 34/89 (38.20%), Postives = 48/89 (53.93%), Query Frame = 0
Query:   26 GLSVTAPTPIHEDNKPCSYNPTNLFSERRVKHIDIKFHIVRKRVESGEVLLVAIWMKDQIADLFTKPLPTPRTRFRREQILGEYYFCCV 114
            GL    P  +  DN   +Y   N     R KH++I FH VR +V SGE ++  +  KDQ+AD+FTKPLP PR    R+++  +    C 
Sbjct:  223 GLHTGQPATLWCDNLGATYLAANPVFHARTKHVEIDFHFVRDKVSSGEFVVNFVSTKDQLADIFTKPLPAPRFHTLRDKLNVDIIHPCA 311          
BLAST of mRNA_P-wetherbeei_contig54.3.1 vs. uniprot
Match: UPI000EFE02AF (uncharacterized protein LOC113557679 n=1 Tax=Rhopalosiphum maidis TaxID=43146 RepID=UPI000EFE02AF)

HSP 1 Score: 64.3 bits (155), Expect = 3.780e-10
Identity = 33/73 (45.21%), Postives = 45/73 (61.64%), Query Frame = 0
Query:   27 LSVTAPTPIHEDNKPCSYNPTNLFSERRVKHIDIKFHIVRKRVESGEVLLVAIWMKDQIADLFTKPLPTPRTR 99
            L V+ PT ++EDN+ C    +N    +R KHIDIK H +RK+V+ G V L  I   DQ +D+ TK LPT  +R
Sbjct:   41 LDVSEPTLLYEDNQSCIKLTSNPGYHKRTKHIDIKLHYIRKKVQDGTVQLKYIHTTDQESDMLTKSLPTINSR 113          
BLAST of mRNA_P-wetherbeei_contig54.3.1 vs. uniprot
Match: W7TAL4_9STRA (Putative polyprotein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TAL4_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 3.920e-10
Identity = 33/79 (41.77%), Postives = 49/79 (62.03%), Query Frame = 0
Query:   32 PTPIHEDNKPCSYNPTNLFSERRVKHIDIKFHIVRKRVESGEVLLVAIWMKDQIADLFTKPLPTPRTRFRREQILGEYY 110
            PT I EDN+ C     N    +R KHI +++H VR++VES EV LV I  + Q+AD+ TKPL + R    R++++G  +
Sbjct:  147 PTMIMEDNQACIAMSNNPIKHKRTKHIHVRYHFVREKVESKEVELVYIPTQHQLADILTKPLLSIRFVMIRDRMMGHEF 225          
BLAST of mRNA_P-wetherbeei_contig54.3.1 vs. uniprot
Match: A0A3S3PWI2_9ACAR (RxLR effector candidate protein-like protein (Fragment) n=1 Tax=Dinothrombium tinctorium TaxID=1965070 RepID=A0A3S3PWI2_9ACAR)

HSP 1 Score: 66.2 bits (160), Expect = 4.490e-10
Identity = 34/80 (42.50%), Postives = 47/80 (58.75%), Query Frame = 0
Query:   26 GLSVTAPTPIHEDNKPCSYNPTNLFSERRVKHIDIKFHIVRKRVESGEVLLVAIWMKDQIADLFTKPLPTPRTRFRREQI 105
            G   TAPT ++EDN+ C     N     R KHIDIK+H VR++VESGEV       K  +AD+ TK +P P+    R+++
Sbjct:  129 GYDQTAPTVLYEDNQSCIAITKNPKLHSRTKHIDIKYHFVREKVESGEVRFEYCESKCMLADIMTKAIPGPQFEVLRDKL 208          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
W7SYU7_9STRA2.500e-1142.68Putative polyprotein n=1 Tax=Nannochloropsis gadit... [more]
W7TF74_9STRA2.570e-1143.90Gag-pol polyprotein n=1 Tax=Nannochloropsis gadita... [more]
W7T0D1_9STRA2.940e-1142.35Gag-pol polyprotein n=1 Tax=Nannochloropsis gadita... [more]
W7TJ26_9STRA5.430e-1142.68Gag-pol polyprotein n=2 Tax=Nannochloropsis gadita... [more]
UPI000900DB5B7.930e-1141.25uncharacterized protein LOC109171181 n=1 Tax=Ipomo... [more]
UPI000900909F1.430e-1041.25uncharacterized protein LOC109149443 n=1 Tax=Ipomo... [more]
UPI000900F7911.670e-1038.20uncharacterized protein LOC109173501 n=3 Tax=Ipomo... [more]
UPI000EFE02AF3.780e-1045.21uncharacterized protein LOC113557679 n=1 Tax=Rhopa... [more]
W7TAL4_9STRA3.920e-1041.77Putative polyprotein n=1 Tax=Nannochloropsis gadit... [more]
A0A3S3PWI2_9ACAR4.490e-1042.50RxLR effector candidate protein-like protein (Frag... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 26..96
e-value: 5.42336E-22
score: 82.9013

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig54contigP-wetherbeei_contig54:5119..5517 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig54.3.1mRNA_P-wetherbeei_contig54.3.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig54 5000..6140 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig54.3.1 ID=prot_P-wetherbeei_contig54.3.1|Name=mRNA_P-wetherbeei_contig54.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=133bp
MRGRVRRRCLCCAACALAATTHASRGLSVTAPTPIHEDNKPCSYNPTNLF
SERRVKHIDIKFHIVRKRVESGEVLLVAIWMKDQIADLFTKPLPTPRTRF
RREQILGEYYFCCVWQQAAESESSLYENWGFS*
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