prot_P-wetherbeei_contig53669.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig53669.1.1
Unique Nameprot_P-wetherbeei_contig53669.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length65
Homology
BLAST of mRNA_P-wetherbeei_contig53669.1.1 vs. uniprot
Match: A0A157ZSN8_9BURK (Two component LuxR family transcriptional regulator n=2 Tax=Caballeronia temeraria TaxID=1777137 RepID=A0A157ZSN8_9BURK)

HSP 1 Score: 67.8 bits (164), Expect = 8.890e-12
Identity = 31/63 (49.21%), Postives = 44/63 (69.84%), Query Frame = 0
Query:    1 MFGEIGVFSPNHTRTTSAICVGDADVFTLTSDQVKRLYLLNPQFALYVVHQIAQRLMADQTRS 63
            + GEIG+FSP H RT++ IC  D D+ T+++    RLY  +P+FALY+V  IA RL AD+ R+
Sbjct:  276 VLGEIGLFSPEHRRTSTVICKTDCDMRTVSAADAIRLYYQDPEFALYLVRLIASRLQADKERN 338          
BLAST of mRNA_P-wetherbeei_contig53669.1.1 vs. uniprot
Match: A0A656QFY6_9BURK (Cyclic nucleotide-binding protein n=2 Tax=Caballeronia zhejiangensis TaxID=871203 RepID=A0A656QFY6_9BURK)

HSP 1 Score: 65.5 bits (158), Expect = 6.000e-11
Identity = 30/62 (48.39%), Postives = 42/62 (67.74%), Query Frame = 0
Query:    1 MFGEIGVFSPNHTRTTSAICVGDADVFTLTSDQVKRLYLLNPQFALYVVHQIAQRLMADQTR 62
            + GEIG+FSP H RT++ IC  D ++ T+++    RLY   P+FALY+V  IA RL AD+ R
Sbjct:  273 VLGEIGLFSPEHRRTSTVICKTDCEMRTVSAADAIRLYYQEPEFALYLVQLIASRLQADKDR 334          
BLAST of mRNA_P-wetherbeei_contig53669.1.1 vs. uniprot
Match: A0A7W8L2Q2_9BURK (DNA-binding NarL/FixJ family response regulator n=3 Tax=Paraburkholderia TaxID=1822464 RepID=A0A7W8L2Q2_9BURK)

HSP 1 Score: 63.9 bits (154), Expect = 2.190e-10
Identity = 29/64 (45.31%), Postives = 44/64 (68.75%), Query Frame = 0
Query:    1 MFGEIGVFSPNHTRTTSAICVGDADVFTLTSDQVKRLYLLNPQFALYVVHQIAQRLMADQTRSV 64
            + GEIG+FSP + RT++AIC  D ++ T+++     LY   P+FALY++  IA RL AD++R V
Sbjct:  279 VLGEIGLFSPEYRRTSTAICKTDCEMRTVSAADAISLYYQEPEFALYLIQLIASRLQADKSRRV 342          
BLAST of mRNA_P-wetherbeei_contig53669.1.1 vs. uniprot
Match: UPI001AE4EEAF (LuxR C-terminal-related transcriptional regulator n=1 Tax=Paraburkholderia sp. LEh10 TaxID=2821353 RepID=UPI001AE4EEAF)

HSP 1 Score: 63.9 bits (154), Expect = 2.190e-10
Identity = 28/62 (45.16%), Postives = 42/62 (67.74%), Query Frame = 0
Query:    1 MFGEIGVFSPNHTRTTSAICVGDADVFTLTSDQVKRLYLLNPQFALYVVHQIAQRLMADQTR 62
            + GEIG+FSP + RT++A+C  D ++ T+++    RLY   P+FALY++  IA RL AD  R
Sbjct:  279 VLGEIGLFSPEYRRTSTAVCKTDCEMRTVSAADAIRLYYQEPEFALYLIQLIASRLQADNAR 340          
BLAST of mRNA_P-wetherbeei_contig53669.1.1 vs. uniprot
Match: A0A1N6K616_9BURK (DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains n=1 Tax=Paraburkholderia phenazinium TaxID=60549 RepID=A0A1N6K616_9BURK)

HSP 1 Score: 63.5 bits (153), Expect = 3.030e-10
Identity = 26/62 (41.94%), Postives = 43/62 (69.35%), Query Frame = 0
Query:    1 MFGEIGVFSPNHTRTTSAICVGDADVFTLTSDQVKRLYLLNPQFALYVVHQIAQRLMADQTR 62
            + GEIG+FSP+H RT +A+C  D ++  +++    R+Y  +P+FA Y+V  I +RL AD++R
Sbjct:  280 ILGEIGLFSPDHRRTCTAVCKSDCELLMVSATDAMRMYYQDPEFATYLVRLITRRLEADKSR 341          
BLAST of mRNA_P-wetherbeei_contig53669.1.1 vs. uniprot
Match: A0A1F4E070_9PROT (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 TaxID=1797497 RepID=A0A1F4E070_9PROT)

HSP 1 Score: 58.5 bits (140), Expect = 8.270e-9
Identity = 23/62 (37.10%), Postives = 41/62 (66.13%), Query Frame = 0
Query:    1 MFGEIGVFSPNHTRTTSAICVGDADVFTLTSDQVKRLYLLNPQFALYVVHQIAQRLMADQTR 62
            + GEIG+FSP+ TRT + +C  D +++ +T + + +LY  +P+   Y++  +A RL+AD  R
Sbjct:  135 LIGEIGLFSPDRTRTQTIVCETDGELYQMTDEMIFQLYYQHPKLGFYLMRLVAARLIADVRR 196          
BLAST of mRNA_P-wetherbeei_contig53669.1.1 vs. uniprot
Match: A0A1M6YRG2_9RHOB (Cyclic nucleotide-binding domain-containing protein n=2 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A1M6YRG2_9RHOB)

HSP 1 Score: 56.2 bits (134), Expect = 8.280e-8
Identity = 24/63 (38.10%), Postives = 40/63 (63.49%), Query Frame = 0
Query:    1 MFGEIGVFSPNHTRTTSAICVGDADVFTLTSDQVKRLYLLNPQFALYVVHQIAQRLMADQTRS 63
            +FGEIG+F+P  TRT SA C  D +++ ++ D + +L L +P F L++   I  R+  + T+S
Sbjct:  149 LFGEIGLFTPERTRTASATCSEDCEIYEISDDDLVQLCLQDPAFGLFLTKLIVARMSDNLTQS 211          
BLAST of mRNA_P-wetherbeei_contig53669.1.1 vs. uniprot
Match: UPI00131ACEE7 (LuxR C-terminal-related transcriptional regulator n=1 Tax=Burkholderia sp. S171 TaxID=1641860 RepID=UPI00131ACEE7)

HSP 1 Score: 56.6 bits (135), Expect = 8.910e-8
Identity = 25/62 (40.32%), Postives = 39/62 (62.90%), Query Frame = 0
Query:    1 MFGEIGVFSPNHTRTTSAICVGDADVFTLTSDQVKRLYLLNPQFALYVVHQIAQRLMADQTR 62
            + GEIG+FSP H RT +A+C    ++  +++    RLY   P+FAL+++  I +RL AD  R
Sbjct:  275 VLGEIGLFSPEHRRTCTAVCRSVCEMRVVSAADAVRLYYQEPEFALHLLQLIVRRLQADSLR 336          
BLAST of mRNA_P-wetherbeei_contig53669.1.1 vs. uniprot
Match: A0A0L0MFW7_9BURK (Transcriptional regulator, LuxR family n=1 Tax=Candidatus Burkholderia verschuerenii TaxID=242163 RepID=A0A0L0MFW7_9BURK)

HSP 1 Score: 53.9 bits (128), Expect = 8.110e-7
Identity = 21/50 (42.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:    1 MFGEIGVFSPNHTRTTSAICVGDADVFTLTSDQVKRLYLLNPQFALYVVH 50
            +FGEIG+FSP H RT++A+C    ++  +++D   RLY   P+FA+Y+++
Sbjct:  274 VFGEIGLFSPKHRRTSTAVCKTVCEMRAVSADDAIRLYYQEPEFAMYLIN 323          
BLAST of mRNA_P-wetherbeei_contig53669.1.1 vs. uniprot
Match: A0A8J3M5K1_9RHOB (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Seohaeicola zhoushanensis TaxID=1569283 RepID=A0A8J3M5K1_9RHOB)

HSP 1 Score: 52.8 bits (125), Expect = 1.520e-6
Identity = 25/64 (39.06%), Postives = 37/64 (57.81%), Query Frame = 0
Query:    1 MFGEIGVFSPNHTRTTSAICVGDADVFTLTSDQVKRLYLLNPQFALYVVHQIAQRLMADQTRSV 64
            +FGE+G+FS    RTTSA C     +FT+  D++  LY  +  F  Y+   IA R+  + TRS+
Sbjct:  137 LFGEVGLFSDQQVRTTSAKCSKPCVMFTIGKDKIVELYHADSAFGYYLTKLIANRMHDNLTRSI 200          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig53669.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A157ZSN8_9BURK8.890e-1249.21Two component LuxR family transcriptional regulato... [more]
A0A656QFY6_9BURK6.000e-1148.39Cyclic nucleotide-binding protein n=2 Tax=Caballer... [more]
A0A7W8L2Q2_9BURK2.190e-1045.31DNA-binding NarL/FixJ family response regulator n=... [more]
UPI001AE4EEAF2.190e-1045.16LuxR C-terminal-related transcriptional regulator ... [more]
A0A1N6K616_9BURK3.030e-1041.94DNA-binding response regulator, NarL/FixJ family, ... [more]
A0A1F4E070_9PROT8.270e-937.10Cyclic nucleotide-binding domain-containing protei... [more]
A0A1M6YRG2_9RHOB8.280e-838.10Cyclic nucleotide-binding domain-containing protei... [more]
UPI00131ACEE78.910e-840.32LuxR C-terminal-related transcriptional regulator ... [more]
A0A0L0MFW7_9BURK8.110e-742.00Transcriptional regulator, LuxR family n=1 Tax=Can... [more]
A0A8J3M5K1_9RHOB1.520e-639.06Cyclic nucleotide-binding domain-containing protei... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10Jelly Rollscoord: 1..63
e-value: 1.8E-9
score: 39.5
IPR000595Cyclic nucleotide-binding domainPROSITEPS50042CNMP_BINDING_3coord: 1..37
score: 8.2358
IPR018490Cyclic nucleotide-binding-likeSUPERFAMILY51206cAMP-binding domain-likecoord: 1..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig53669contigP-wetherbeei_contig53669:33..227 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig53669.1.1mRNA_P-wetherbeei_contig53669.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig53669 3..227 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig53669.1.1 ID=prot_P-wetherbeei_contig53669.1.1|Name=mRNA_P-wetherbeei_contig53669.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=65bp
MFGEIGVFSPNHTRTTSAICVGDADVFTLTSDQVKRLYLLNPQFALYVVH
QIAQRLMADQTRSV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014710RmlC-like_jellyroll
IPR000595cNMP-bd_dom
IPR018490cNMP-bd-like