prot_P-wetherbeei_contig5365.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig5365.1.1
Unique Nameprot_P-wetherbeei_contig5365.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length361
Homology
BLAST of mRNA_P-wetherbeei_contig5365.1.1 vs. uniprot
Match: A0A1F9CH84_9DELT (Uncharacterized protein (Fragment) n=1 Tax=Deltaproteobacteria bacterium RBG_16_54_11 TaxID=1797842 RepID=A0A1F9CH84_9DELT)

HSP 1 Score: 53.1 bits (126), Expect = 2.390e-5
Identity = 24/61 (39.34%), Postives = 39/61 (63.93%), Query Frame = 0
Query:    7 DSIISACTAVIDNPRERSATLAAAYAARGDAYREKGEFDKAIDDLDQAMKLDPRNGTAIYN 67
            D  I  CT  I++       L++ Y  RG A+ EKG++DKAI D+++A+++DP++  A YN
Sbjct:   43 DEAIRLCTKAIESGELSGKNLSSVYCTRGTAWAEKGDYDKAIADINKAIEIDPKDAMAYYN 103          
BLAST of mRNA_P-wetherbeei_contig5365.1.1 vs. uniprot
Match: A0A525JG09_BRASZ (Tetratricopeptide repeat protein n=1 Tax=Bradyrhizobium sp. TaxID=376 RepID=A0A525JG09_BRASZ)

HSP 1 Score: 56.2 bits (134), Expect = 2.690e-5
Identity = 26/47 (55.32%), Postives = 35/47 (74.47%), Query Frame = 0
Query:   13 CTAVIDNPRERSATLAAAYAARGDAYREKGEFDKAIDDLDQAMKLDP 59
            CTAVID+  ER+   A AY  RGDAY  KG++D+A+ D DQ++KL+P
Sbjct:   58 CTAVIDSVGERAPAAAMAYNNRGDAYTTKGDYDRAVKDFDQSIKLNP 104          
BLAST of mRNA_P-wetherbeei_contig5365.1.1 vs. uniprot
Match: A0A2V6SAQ4_9BACT (Uncharacterized protein n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6SAQ4_9BACT)

HSP 1 Score: 57.0 bits (136), Expect = 2.900e-5
Identity = 28/57 (49.12%), Postives = 42/57 (73.68%), Query Frame = 0
Query:    5 SQDSIISACTAVIDNPRERSATLAAAYAARGDAYREKGEFDKAIDDLDQAMKLDPRN 61
            S +  I +CTA+I + RE+ A LAAAY +R  A+R  G +D+AI+D DQA++LDP++
Sbjct:   66 SSEVAIQSCTAIIRSGREKGARLAAAYYSRATAHRVDGWYDRAIEDYDQAIRLDPKH 122          
BLAST of mRNA_P-wetherbeei_contig5365.1.1 vs. uniprot
Match: A0A2V6U2A2_9BACT (Uncharacterized protein n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6U2A2_9BACT)

HSP 1 Score: 56.6 bits (135), Expect = 3.850e-5
Identity = 27/52 (51.92%), Postives = 40/52 (76.92%), Query Frame = 0
Query:   10 ISACTAVIDNPRERSATLAAAYAARGDAYREKGEFDKAIDDLDQAMKLDPRN 61
            I +CTA+I + RE+ A LAAAY +R  A+R  G +D+AI+D DQA++LDP++
Sbjct:   46 IQSCTAIIRSGREKGARLAAAYYSRATAHRVDGWYDRAIEDYDQAIRLDPKH 97          
BLAST of mRNA_P-wetherbeei_contig5365.1.1 vs. uniprot
Match: A0A410V7Q4_9BRAD (Uncharacterized protein n=1 Tax=Bradyrhizobium guangdongense TaxID=1325090 RepID=A0A410V7Q4_9BRAD)

HSP 1 Score: 55.5 bits (132), Expect = 5.560e-5
Identity = 28/56 (50.00%), Postives = 35/56 (62.50%), Query Frame = 0
Query:    4 SSQDSIISACTAVIDNPRERSATLAAAYAARGDAYREKGEFDKAIDDLDQAMKLDP 59
            S+ D  + AC+ VID   E    LA AY ARG  + EK E D A+ DLD+A+KLDP
Sbjct:   38 STPDERVKACSTVIDTKSETGGRLAGAYCARGHGFTEKRELDAALSDLDEAIKLDP 93          
BLAST of mRNA_P-wetherbeei_contig5365.1.1 vs. uniprot
Match: A0A537UV81_9PROT (Tetratricopeptide repeat protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537UV81_9PROT)

HSP 1 Score: 53.1 bits (126), Expect = 6.910e-5
Identity = 26/60 (43.33%), Postives = 38/60 (63.33%), Query Frame = 0
Query:    5 SQDSIISACTAVIDNPRERSATLAAAYAARGDAYREKGEFDKAIDDLDQAMKLDPRNGTA 64
            S D  +  CTA+I++  +   +L  AY  RG+AY  KGE+D+A+ D DQ++KLDP    A
Sbjct:   47 SPDIQVDGCTALINSSAQTPQSLVIAYNNRGNAYTAKGEYDRAVQDYDQSIKLDPNYARA 106          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5365.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A1F9CH84_9DELT2.390e-539.34Uncharacterized protein (Fragment) n=1 Tax=Deltapr... [more]
A0A525JG09_BRASZ2.690e-555.32Tetratricopeptide repeat protein n=1 Tax=Bradyrhiz... [more]
A0A2V6SAQ4_9BACT2.900e-549.12Uncharacterized protein n=1 Tax=Candidatus Rokubac... [more]
A0A2V6U2A2_9BACT3.850e-551.92Uncharacterized protein n=1 Tax=Candidatus Rokubac... [more]
A0A410V7Q4_9BRAD5.560e-550.00Uncharacterized protein n=1 Tax=Bradyrhizobium gua... [more]
A0A537UV81_9PROT6.910e-543.33Tetratricopeptide repeat protein (Fragment) n=1 Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 235..268
e-value: 2.5E-8
score: 43.7
coord: 167..200
e-value: 2.0E-5
score: 34.0
coord: 62..98
e-value: 0.014
score: 24.6
coord: 201..234
e-value: 1.2E-6
score: 38.1
coord: 303..336
e-value: 7.9E-6
score: 35.4
coord: 99..132
e-value: 1.3E-4
score: 31.3
coord: 269..302
e-value: 8.8E-8
score: 41.9
coord: 133..166
e-value: 1.7E-7
score: 40.9
coord: 28..61
e-value: 3.0E-7
score: 40.1
IPR019734Tetratricopeptide repeatPFAMPF13181TPR_8coord: 102..132
e-value: 0.0036
score: 17.4
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 167..200
score: 12.3314
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 269..302
score: 13.5409
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 235..268
score: 12.1249
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 201..234
score: 11.416901
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 99..132
score: 9.5289
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 133..166
score: 11.9479
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 28..61
score: 13.7179
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 303..336
score: 12.5084
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 214..283
e-value: 3.4E-22
score: 80.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 135..213
e-value: 8.7E-27
score: 96.4
coord: 1..134
e-value: 1.6E-30
score: 108.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 284..361
e-value: 7.0E-26
score: 92.8
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 261..360
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 29..289
NoneNo IPR availablePFAMPF13432TPR_16coord: 273..337
e-value: 6.7E-10
score: 39.4
NoneNo IPR availablePFAMPF13414TPR_11coord: 35..76
e-value: 9.9E-11
score: 41.2
coord: 208..247
e-value: 2.5E-12
score: 46.3
NoneNo IPR availablePANTHERPTHR44858TETRATRICOPEPTIDE REPEAT PROTEIN 6coord: 281..359
NoneNo IPR availablePANTHERPTHR44858:SF11SUBFAMILY NOT NAMEDcoord: 281..359
NoneNo IPR availablePANTHERPTHR44858TETRATRICOPEPTIDE REPEAT PROTEIN 6coord: 240..303
NoneNo IPR availablePANTHERPTHR44858:SF11SUBFAMILY NOT NAMEDcoord: 240..303
NoneNo IPR availablePANTHERPTHR44858TETRATRICOPEPTIDE REPEAT PROTEIN 6coord: 28..279
NoneNo IPR availablePANTHERPTHR44858:SF11SUBFAMILY NOT NAMEDcoord: 28..279
NoneNo IPR availablePROSITEPS50293TPR_REGIONcoord: 167..200
score: 9.193199
NoneNo IPR availablePROSITEPS50293TPR_REGIONcoord: 133..163
score: 10.170074
NoneNo IPR availablePROSITEPS50293TPR_REGIONcoord: 28..61
score: 10.877466
NoneNo IPR availablePROSITEPS50293TPR_REGIONcoord: 201..233
score: 9.226884
NoneNo IPR availablePROSITEPS50293TPR_REGIONcoord: 235..267
score: 9.698479
NoneNo IPR availablePROSITEPS50293TPR_REGIONcoord: 303..336
score: 9.395311
NoneNo IPR availablePROSITEPS50293TPR_REGIONcoord: 269..302
score: 10.911152
IPR001440Tetratricopeptide repeat 1PFAMPF00515TPR_1coord: 133..164
e-value: 1.6E-9
score: 37.2
coord: 169..200
e-value: 6.3E-7
score: 29.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5365contigP-wetherbeei_contig5365:207..1385 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5365.1.1mRNA_P-wetherbeei_contig5365.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig5365 207..1385 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig5365.1.1 ID=prot_P-wetherbeei_contig5365.1.1|Name=mRNA_P-wetherbeei_contig5365.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=361bp
KESSSQDSIISACTAVIDNPRERSATLAAAYAARGDAYREKGEFDKAIDD
LDQAMKLDPRNGTAIYNRGLAYRSKGDHDRAIADFDDLTQAIKINPRYTL
AIYNRAMAYRAKGEPDRAVPDFDAVIKANPNDAYAYHNRGMAYRDMRDYD
RAIRDFDQALKINSAFTAAFNDRGLAYVSKGETDRAIQDFDQAILLNPKD
AVAFNNRGLAYRNKGETDAAINNYDQAISITPDFALAFYNRGNANYDKRD
YDRAIQDYNTAIKINPNYALAYYDRGVVYYDRHDYERAVADLSKAIELDP
KDSLAYYNRGLTYRAKQEMDKALADFDVAIKLDPKNPLPFYNRGLASRDK
GDHERAVADFS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR001440TPR_1