prot_P-wetherbeei_contig53589.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig53589.1.1
Unique Nameprot_P-wetherbeei_contig53589.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length122
Homology
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BLAST of mRNA_P-wetherbeei_contig53589.1.1 vs. uniprot
Match: A0A835YNE5_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNE5_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 4.650e-6
Identity = 24/31 (77.42%), Postives = 27/31 (87.10%), Query Frame = 0 
Query:    1 ADRNGRIEVSEFARFCRQIPTLAWKAERARR 31
            A+RNGRIE+SEF  FC  IP+LAWKAERARR
Sbjct:   96 ANRNGRIELSEFMEFCMAIPSLAWKAERARR 126
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig53589.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YNE5_9STRA4.650e-677.42EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 121..122
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig53589contigP-wetherbeei_contig53589:172..537 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig53589.1.1mRNA_P-wetherbeei_contig53589.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig53589 171..537 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig53589.1.1 ID=prot_P-wetherbeei_contig53589.1.1|Name=mRNA_P-wetherbeei_contig53589.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=122bp
ADRNGRIEVSEFARFCRQIPTLAWKAERARRGDDIGRAAWEMSFEVARAV
SVTAETTAVTTATAAFTSVASTASEAGRTGGASDPTVGANSGNDGVERPC
TTSGAVVSLSAVGIGPVGDIVK
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