prot_P-wetherbeei_contig535.1.2 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig535.1.2
Unique Nameprot_P-wetherbeei_contig535.1.2
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length353
Homology
BLAST of mRNA_P-wetherbeei_contig535.1.2 vs. uniprot
Match: A0A7S3TX12_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3TX12_9SPIT)

HSP 1 Score: 80.9 bits (198), Expect = 2.320e-14
Identity = 53/168 (31.55%), Postives = 82/168 (48.81%), Query Frame = 0
Query:   95 FQITDRCALDVAVSGQPAGTIVIGLWGRAAPELVGTFAALCRNDLVVPGGEL-FGYDDSQIDQVSKGRAVSFGRVKVPAG---MFRRAAKAQPEDFAPPPSDDRTPQRHDRPGLVSVPRGGASFRFLVTAGQAAAVNXXXXXXXXXLFGGPWRGLDDENVVVGQVRAS 258
            ++ ++R  L++++SGQPAG+I +GLW   AP  V TF  L +  L    G+    +D S + +++K +A+  G ++   G   + R   +      APP + D    RHD  GL+SV RGG SF F +T                     P   LD + +V+GQV  S
Sbjct:   10 YETSERVILELSLSGQPAGSIEVGLWRDQAPGSVDTFVKLAQGRLAPSSGDSPASFDRSSLIRIAKDKAIVLGALRQVGGQTQLVRGQTRPVMIPVAPPLNKDSNLVRHDAAGLLSVRRGGGSFAFTITPR-------------------PNLDLDRDEIVIGQVLTS 158          
BLAST of mRNA_P-wetherbeei_contig535.1.2 vs. uniprot
Match: A0A7S4JBR0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4JBR0_9EUKA)

HSP 1 Score: 68.2 bits (165), Expect = 5.080e-10
Identity = 47/177 (26.55%), Postives = 76/177 (42.94%), Query Frame = 0
Query:   96 QITDRCALDVAVSGQPAGTIVIGLWGRAAPELVGTFAALCRNDLVVPGGELFGYDDSQIDQVSKGRAVSFGRVKVPA-----------GMFRRAAKAQPEDFAPPPSDDRTPQRHDRPGLVSVPRGGASFRFLVTAGQAAAVNXXXXXXXXXLFGGPWRGLDDENVVVGQVRASGKK 261
            Q+T R  L VA+   P  ++ +GL+G AAP+ V  F  LC   +    G+   Y  S + ++ + R +  G +   +           G  R     + +++A   +DD     HDRPGLVS+ +GG +F F++T     A                   LD  N+V+G+      K
Sbjct:   17 QVTSRARLRVAIGDAPPQSLTVGLYGSAAPKSVALFEGLCAGTV----GKGLTYTGSSVSRIERDRLIVGGSLAAGSTRSKDTSIDSTGYVRSKMVNRADEYA---NDDANTLSHDRPGLVSMRKGGGAFEFVLTPAANPA-------------------LDATNIVIGEALGGDDK 167          
BLAST of mRNA_P-wetherbeei_contig535.1.2 vs. uniprot
Match: B8ACM2_ORYSI (Peptidyl-prolyl cis-trans isomerase n=10 Tax=Oryza TaxID=4527 RepID=B8ACM2_ORYSI)

HSP 1 Score: 58.2 bits (139), Expect = 3.900e-6
Identity = 47/173 (27.17%), Postives = 70/173 (40.46%), Query Frame = 0
Query:   96 QITDRCALDVAVSGQPAGTIVIGLWGRAAPELVGTFAALCRNDLVVPGGELFGYDDSQIDQVSKGRAVSFGRVKVPAGMFRRAAKAQPEDFAPPPSDDRTPQRHDRPGLVSVPRGGASFRFLVTAGQAAAVNXXXXXXXXXLFGGPWRGLDDENVVVGQVRASGKKKRNAEEK 268
            ++T +C  DV V G+PAG IVIGL+G   P+ V  F ALC  D      + +GY      ++ K   +  G  +   G   R+   +  D      D+    +H  PG++S+   G          Q    N             PW  LD+ +VV G V       +N E +
Sbjct:   70 KVTSKCFFDVEVGGEPAGRIVIGLFGEVVPKTVDNFRALCTGD------KGYGYKGCSFHRIIKDFMIQGGDFQNNNGTGGRSIYGECFD------DENFTLKHTGPGVLSMANAGPD----TNGSQFFICNVKT----------PW--LDNRHVVFGHVLEGMDVVKNLESQ 214          
BLAST of mRNA_P-wetherbeei_contig535.1.2 vs. uniprot
Match: A0A0M0JC37_9EUKA (Peptidyl-prolyl cis-trans isomerase cyp20-chloroplastic-like protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JC37_9EUKA)

HSP 1 Score: 57.4 bits (137), Expect = 6.800e-6
Identity = 52/172 (30.23%), Postives = 72/172 (41.86%), Query Frame = 0
Query:   96 QITDRCALDVAVSGQPAGTIV--IGLWGRAAPELVGTFAALCRNDLVVPGGELFGYDDSQIDQVSKGRAVSFG----------RVKVPAGMFRRAAKAQPEDFAPPPSDDRTPQRHDRPGLVSVPRGGASFRFLVTAGQAAAVNXXXXXXXXXLFGGPWRGLDDENVVVGQV 255
            ++T   AL +AV    A   V  I L+G  AP  V TF  +C  D  +PG     Y  + I +V + R +  G          R     G  R    ++ + F    + D    RHDRPG VS+ +GG  FR  +    A A N               R LD+ N+V+GQV
Sbjct:   20 RVTAEAALTIAVGTTDAARRVLPIALFGDEAPGSVATFRGVC--DGTLPGQAGVTYRGTTISRVERDRVIQAGVASGSGQDVERSIDSTGYVRSVYVSRADAFK---NSDTNELRHDRPGRVSMQKGGGDFRLTI----APAEN---------------RALDETNIVIGQV 167          
BLAST of mRNA_P-wetherbeei_contig535.1.2 vs. uniprot
Match: A0A2E8AYF3_9PLAN (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E8AYF3_9PLAN)

HSP 1 Score: 56.6 bits (135), Expect = 8.740e-6
Identity = 45/167 (26.95%), Postives = 73/167 (43.71%), Query Frame = 0
Query:   96 QITDRCALDVAVSGQPAGTIVIGLWGRAAPELVGTFAALCRNDLVVP-GGELFGYDDSQIDQVSKGRAVSFGRVKVPAGMFRRA---AKAQPEDFAPPPSDDRTPQRHDRPGLVSVPRGGASF---RFLVTAGQAAAVNXXXXXXXXXLFGGPWRGLDDENVVVGQV 255
            Q+T++   D+ + G+PAG IV+GL+G   P+ V  F ALC  +      G+   Y  S   +V     +  G   +  G    +   +K   EDF+          RH++PGL+S+   G +    +F +T  +                  PW  LD ++V+ GQV
Sbjct:   34 QVTNQVFFDLTIDGEPAGRIVMGLYGNVVPKTVENFRALCTGEKGKGRSGKALHYKGSSFHRVIPNFMIQGGDFTIGNGTGGESIYGSKFNDEDFS---------LRHNQPGLLSMANAGPNTNNSQFFITTVKT-----------------PW--LDGKHVIFGQV 172          
BLAST of mRNA_P-wetherbeei_contig535.1.2 vs. uniprot
Match: A0A835AL51_9POAL (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Digitaria exilis TaxID=1010633 RepID=A0A835AL51_9POAL)

HSP 1 Score: 57.0 bits (136), Expect = 1.070e-5
Identity = 34/103 (33.01%), Postives = 52/103 (50.49%), Query Frame = 0
Query:   85 AVAPPPAIDAFQ--ITDRCALDVAVSGQPAGTIVIGLWGRAAPELVGTFAALCR------NDLVVPGGELFGYDDSQIDQVSKGRAVSFGRVKVPAGMFRRAA 179
            A A   A++  Q  +T +C  DV V G+PAG IVIGL+G   PE V  F ALC       N + + G + +GY      ++ K   +  G  +   G +R+++
Sbjct:   59 AAAAEGAVEELQAKVTSKCFFDVEVGGEPAGRIVIGLFGEVVPETVENFRALCTGAYVTANRVRISGEKGYGYKGCSFHRIIKDFMIQGGDFQENNGEYRKSS 161          
BLAST of mRNA_P-wetherbeei_contig535.1.2 vs. uniprot
Match: C5XHY3_SORBI (Peptidyl-prolyl cis-trans isomerase n=8 Tax=Andropogoneae TaxID=147429 RepID=C5XHY3_SORBI)

HSP 1 Score: 56.2 bits (134), Expect = 1.810e-5
Identity = 45/160 (28.12%), Postives = 68/160 (42.50%), Query Frame = 0
Query:   96 QITDRCALDVAVSGQPAGTIVIGLWGRAAPELVGTFAALCRNDLVVPGGELFGYDDSQIDQVSKGRAVSFGRVKVPAGMFRRAAKAQPEDFAPPPSDDRTPQRHDRPGLVSVPRGGASFRFLVTAGQAAAVNXXXXXXXXXLFGGPWRGLDDENVVVGQV 255
            ++T +C  DV V G+PAG IVIGL+G   P+ V  F ALC       G + +GY      ++ K   +  G  +   G   R+   +  D      D+    +H  PG++S+   G +     T G    +              PW  LD+ +VV G V
Sbjct:   74 KVTTKCFFDVEVGGEPAGRIVIGLFGEVVPKTVDNFRALCT------GEKGYGYKGCSFHRIIKDFMIQGGDFQENNGTGGRSIYGESFD------DENFTLKHVGPGVLSMANAGPN-----TNGSQFFICTVKT---------PW--LDNRHVVFGHV 205          
BLAST of mRNA_P-wetherbeei_contig535.1.2 vs. uniprot
Match: A0A6U0AUY4_9CHLO (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A6U0AUY4_9CHLO)

HSP 1 Score: 56.2 bits (134), Expect = 2.090e-5
Identity = 49/178 (27.53%), Postives = 75/178 (42.13%), Query Frame = 0
Query:   90 PAIDAFQITDRCALDVAVSGQPAGTIVIGLWGRAAPELVGTFAALCRNDLVVPGGELFGYDDSQIDQVSKG---RAVSFGRVKVPAGMFRRAAKAQPEDFAPPPSDDRTPQRHDRPGLVSVPRGGASF---RFLVTAGQAAAVNXXXXXXXXXLFGGPWRGLDDENVVVGQVRASGKK 261
            P +   ++T++   DV++ G+PAG IVIGL+G+ AP+ V  F AL        G + +GY +S   +V  G   +   F       G      K + E FA P         H  PG++S+   G +    +F +T      +N         +FG    GLD    +     A G K
Sbjct:   88 PLLCVLEVTNKVYFDVSIGGEPAGRIVIGLFGKDAPKTVENFRALAT------GEKGYGYANSIFHRVIPGFMLQGGDFTNFNGTGGRSIYGNKFEDETFAIP---------HVGPGVLSMANAGPNTNGSQFFITVAPTPWLNGRHV-----VFGNVVEGLDVVRAIEANPTARGDK 245          
BLAST of mRNA_P-wetherbeei_contig535.1.2 vs. uniprot
Match: A0A059DDY2_EUCGR (Peptidyl-prolyl cis-trans isomerase n=6 Tax=Myrtoideae TaxID=1699513 RepID=A0A059DDY2_EUCGR)

HSP 1 Score: 56.2 bits (134), Expect = 2.160e-5
Identity = 48/163 (29.45%), Postives = 70/163 (42.94%), Query Frame = 0
Query:   96 QITDRCALDVAVSGQPAGTIVIGLWGRAAPELVGTFAALCRNDLVVPGGELFGYDDSQIDQVSKGRAVS---FGRVKVPAGMFRRAAKAQPEDFAPPPSDDRTPQRHDRPGLVSVPRGGASFRFLVTAGQAAAVNXXXXXXXXXLFGGPWRGLDDENVVVGQV 255
            ++T++C  DV + G+PAG IVIGL+G   P+ V  F ALC       G + FGY      ++ K   +    F R     G     +  + E+FA          +H  PG++S+   G S     T G    +              PW  LD+ +VV GQV
Sbjct:   94 KVTNKCFFDVEIGGEPAGRIVIGLFGDDVPKTVENFRALCT------GEKGFGYKGCSFHRIIKDFMIQGGDFTRGNGTGGKSIYGSTFEDENFA---------LKHVGPGVLSMANAGPS-----TNGSQFFICTVKT---------PW--LDNRHVVFGQV 225          
BLAST of mRNA_P-wetherbeei_contig535.1.2 vs. uniprot
Match: B9EVK2_ORYSJ (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=B9EVK2_ORYSJ)

HSP 1 Score: 55.5 bits (132), Expect = 2.970e-5
Identity = 46/173 (26.59%), Postives = 70/173 (40.46%), Query Frame = 0
Query:   96 QITDRCALDVAVSGQPAGTIVIGLWGRAAPELVGTFAALCRNDLVVPGGELFGYDDSQIDQVSKGRAVSFGRVKVPAGMFRRAAKAQPEDFAPPPSDDRTPQRHDRPGLVSVPRGGASFRFLVTAGQAAAVNXXXXXXXXXLFGGPWRGLDDENVVVGQVRASGKKKRNAEEK 268
            ++  +C  DV V G+PAG IVIGL+G   P+ V  F ALC  D      + +GY      ++ K   +  G  +   G   R+   +  D      D+    +H  PG++S+   G       T G    +              PW  LD+ +VV G V       +N E +
Sbjct:   64 KVNSKCFFDVEVGGEPAGRIVIGLFGEVVPKTVDNFRALCTGD------KGYGYKGCSFHRIIKDFMIQGGDFQNNNGTGGRSIYGECFD------DENFTLKHTGPGVLSMANAGPD-----TNGSQFFICTVKT---------PW--LDNRHVVFGHVLEGMDVVKNLESQ 208          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig535.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A7S3TX12_9SPIT2.320e-1431.55Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]
A0A7S4JBR0_9EUKA5.080e-1026.55Hypothetical protein (Fragment) n=1 Tax=Prymnesium... [more]
B8ACM2_ORYSI3.900e-627.17Peptidyl-prolyl cis-trans isomerase n=10 Tax=Oryza... [more]
A0A0M0JC37_9EUKA6.800e-630.23Peptidyl-prolyl cis-trans isomerase cyp20-chloropl... [more]
A0A2E8AYF3_9PLAN8.740e-626.95Peptidyl-prolyl cis-trans isomerase n=1 Tax=Planct... [more]
A0A835AL51_9POAL1.070e-533.01Peptidyl-prolyl cis-trans isomerase n=1 Tax=Digita... [more]
C5XHY3_SORBI1.810e-528.13Peptidyl-prolyl cis-trans isomerase n=8 Tax=Androp... [more]
A0A6U0AUY4_9CHLO2.090e-527.53Peptidyl-prolyl cis-trans isomerase n=2 Tax=Ostreo... [more]
A0A059DDY2_EUCGR2.160e-529.45Peptidyl-prolyl cis-trans isomerase n=6 Tax=Myrtoi... [more]
B9EVK2_ORYSJ2.970e-526.59Peptidyl-prolyl cis-trans isomerase n=1 Tax=Oryza ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPFAMPF00160Pro_isomerasecoord: 105..256
e-value: 9.2E-7
score: 29.2
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPROSITEPS50072CSA_PPIASE_2coord: 102..271
score: 13.281575
IPR029000Cyclophilin-like domain superfamilyGENE3D2.40.100.10coord: 91..270
e-value: 8.0E-14
score: 53.7
IPR029000Cyclophilin-like domain superfamilySUPERFAMILY50891Cyclophilin-likecoord: 93..245
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 179..203
IPR006311Twin-arginine translocation pathway, signal sequencePROSITEPS51318TATcoord: 1..44
score: 8.561047

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig535contigP-wetherbeei_contig535:1600..3366 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig535.1.2mRNA_P-wetherbeei_contig535.1.2Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig535 1564..3379 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig535.1.2 ID=prot_P-wetherbeei_contig535.1.2|Name=mRNA_P-wetherbeei_contig535.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=353bp
MDYDSNPRPAHPAPSSRRAALQTLSKVAAGTALWGAIEIPAASAEQPALW
ADLDGDLGIIWGGRNRCAPEDSSCRDDGQREEEVAVAPPPAIDAFQITDR
CALDVAVSGQPAGTIVIGLWGRAAPELVGTFAALCRNDLVVPGGELFGYD
DSQIDQVSKGRAVSFGRVKVPAGMFRRAAKAQPEDFAPPPSDDRTPQRHD
RPGLVSVPRGGASFRFLVTAGQAAAVNGGGGGGGGGLFGGPWRGLDDENV
VVGQVRASGKKKRNAEEKFPAFSPLKCFIHHVFAFFFVFSSASGLSLYFS
LHCSARAAATSAGAWQIRRRRRRRFTLGGLGGGRHDRCWKGWTCWRGWTG
CP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002130Cyclophilin-type_PPIase_dom
IPR029000Cyclophilin-like_dom_sf
IPR006311TAT_signal