prot_P-wetherbeei_contig53432.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig53432.1.1
Unique Name	prot_P-wetherbeei_contig53432.1.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	179

Homology

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BLAST of mRNA_P-wetherbeei_contig53432.1.1 vs. uniprot
Match: UPI000E0D2D1B (acetate--CoA ligase family protein n=1 Tax=Rhodoferax ferrireducens TaxID=192843 RepID=UPI000E0D2D1B)

HSP 1 Score: 307 bits (786), Expect = 4.700e-98
Identity = 161/179 (89.94%), Postives = 169/179 (94.41%), Query Frame = 0

Query:    1 SLADVPETPDVVVLAVGQEQVPEMVRQCATRGVGTAVVMSSGFGETGAEGVERQRVLVEQARHLGVRLVGPNAQGIANFRTGAVLNFSTMFMEIAPKDGPVAIISQSGAASVMPYAMLRERDIGVRYLVASGNDADASVSELALVAAADPEIRVVLLYIESLSDPETLAEVARLACARG 179
            SLAD+P+TPDV VLAVGQ+QVPEM+RQCA  GVG AVVMSSGFGETGAEGV+RQR LVE AR LGVRL+GPNAQGIANFRTGAVLNFSTMFME+APKDGPVAIISQSGAASVMPYAMLRERDIGVRYLVASGNDADASVSELALVAAADPE+RVVLLYIESLSDPE LA VARLA ARG
Sbjct:   65 SLADLPKTPDVAVLAVGQDQVPEMIRQCAIHGVGVAVVMSSGFGETGAEGVKRQRALVELARQLGVRLIGPNAQGIANFRTGAVLNFSTMFMEVAPKDGPVAIISQSGAASVMPYAMLRERDIGVRYLVASGNDADASVSELALVAAADPEVRVVLLYIESLSDPEMLANVARLANARG 243

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BLAST of mRNA_P-wetherbeei_contig53432.1.1 vs. uniprot
Match: UPI0004914364 (acetate--CoA ligase family protein n=1 Tax=Azohydromonas australica TaxID=364039 RepID=UPI0004914364)

HSP 1 Score: 292 bits (748), Expect = 2.140e-92
Identity = 153/179 (85.47%), Postives = 166/179 (92.74%), Query Frame = 0

Query:    1 SLADVPETPDVVVLAVGQEQVPEMVRQCATRGVGTAVVMSSGFGETGAEGVERQRVLVEQARHLGVRLVGPNAQGIANFRTGAVLNFSTMFMEIAPKDGPVAIISQSGAASVMPYAMLRERDIGVRYLVASGNDADASVSELALVAAADPEIRVVLLYIESLSDPETLAEVARLACARG 179
            SLA +PE PDV V+AVGQEQV E++RQCA RGVGTAVVMSSGFGETGAEG+ RQR LVE+AR LGVRL+GPNAQGIANF +GAVLNFSTMFME+AP+DGPVAI+SQSGAASVMPYA+LRER IGVRYLVASGNDADASV ELALVAAADP+IRVVLLYIESLSDP TLAEVARLA ARG
Sbjct:   64 SLAALPEAPDVAVVAVGQEQVAEVIRQCAARGVGTAVVMSSGFGETGAEGLARQRALVEEARRLGVRLIGPNAQGIANFGSGAVLNFSTMFMEVAPQDGPVAIVSQSGAASVMPYALLRERGIGVRYLVASGNDADASVGELALVAAADPDIRVVLLYIESLSDPATLAEVARLANARG 242

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BLAST of mRNA_P-wetherbeei_contig53432.1.1 vs. uniprot
Match: A0A520GB17_9BURK (CoA-binding protein n=1 Tax=Variovorax sp. TaxID=1871043 RepID=A0A520GB17_9BURK)

HSP 1 Score: 273 bits (699), Expect = 3.810e-85
Identity = 139/179 (77.65%), Postives = 157/179 (87.71%), Query Frame = 0

Query:    1 SLADVPETPDVVVLAVGQEQVPEMVRQCATRGVGTAVVMSSGFGETGAEGVERQRVLVEQARHLGVRLVGPNAQGIANFRTGAVLNFSTMFMEIAPKDGPVAIISQSGAASVMPYAMLRERDIGVRYLVASGNDADASVSELALVAAADPEIRVVLLYIESLSDPETLAEVARLACARG 179
            SL   PE PDV ++AVGQ+ V  ++ QCA RGVGTA+VMSSGFGETG +G+ RQ+ LV QAR LG+RLVGPNAQG+ANF+TGAV+NFSTMFME+AP+DGPVAI+SQSGAASVMPYAMLRER +GVRYLVASGNDADASV ELAL AAADPEIRVVL+YIESLSDP  LAEVARL  ARG
Sbjct:   65 SLDAAPEAPDVAIVAVGQDAVAGVIDQCAARGVGTAIVMSSGFGETGGDGIARQQALVAQARRLGIRLVGPNAQGVANFQTGAVMNFSTMFMEVAPQDGPVAIVSQSGAASVMPYAMLRERGVGVRYLVASGNDADASVCELALAAAADPEIRVVLMYIESLSDPAMLAEVARLTAARG 243

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BLAST of mRNA_P-wetherbeei_contig53432.1.1 vs. uniprot
Match: UPI001F399C7D (acetate--CoA ligase family protein n=1 Tax=Caenimonas soli TaxID=2735555 RepID=UPI001F399C7D)

HSP 1 Score: 272 bits (695), Expect = 1.180e-84
Identity = 142/179 (79.33%), Postives = 159/179 (88.83%), Query Frame = 0

Query:    1 SLADVPETPDVVVLAVGQEQVPEMVRQCATRGVGTAVVMSSGFGETGAEGVERQRVLVEQARHLGVRLVGPNAQGIANFRTGAVLNFSTMFMEIAPKDGPVAIISQSGAASVMPYAMLRERDIGVRYLVASGNDADASVSELALVAAADPEIRVVLLYIESLSDPETLAEVARLACARG 179
            SL  +PETPDV V+AVG + V ++VRQCA RGV +AVVMSSGFGETG EG++RQR LV QAR LGVRLVGPNAQGIANF+TGAVLNFSTMFME+APKDGPVAI+SQSGAASVMPYAMLRER +GVRY+VASGNDAD SV ELAL AAADPE+RV+LLYIESL+DP  LAE AR+A ARG
Sbjct:   57 SLEALPETPDVAVVAVGGDHVLDVVRQCAARGVRSAVVMSSGFGETGPEGMQRQRELVAQARSLGVRLVGPNAQGIANFQTGAVLNFSTMFMEVAPKDGPVAIVSQSGAASVMPYAMLRERGVGVRYVVASGNDADVSVCELALAAAADPEVRVLLLYIESLADPAVLAEAARVAHARG 235

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BLAST of mRNA_P-wetherbeei_contig53432.1.1 vs. uniprot
Match: T1XI84_VARPD (Putative acyl-CoA ligase n=2 Tax=Variovorax paradoxus TaxID=34073 RepID=T1XI84_VARPD)

HSP 1 Score: 272 bits (695), Expect = 1.490e-84
Identity = 138/179 (77.09%), Postives = 159/179 (88.83%), Query Frame = 0

Query:    1 SLADVPETPDVVVLAVGQEQVPEMVRQCATRGVGTAVVMSSGFGETGAEGVERQRVLVEQARHLGVRLVGPNAQGIANFRTGAVLNFSTMFMEIAPKDGPVAIISQSGAASVMPYAMLRERDIGVRYLVASGNDADASVSELALVAAADPEIRVVLLYIESLSDPETLAEVARLACARG 179
            SL  VPETPDV ++AVGQ+ V  ++ QCA RGVG+A+VMSSGFGETG++GV RQ+ LV QAR LG+RL+GPNAQG+ANF TGAV+NFSTMFME+AP+DGPVAI+SQSGAASVMPYAMLRER +GVRYLVASGNDADA+V ELAL AAADP IRVVL+YIESL+DP  LAEVARLA ARG
Sbjct:   65 SLDAVPETPDVAIVAVGQDAVAGVIDQCAARGVGSAIVMSSGFGETGSDGVARQQALVAQARRLGIRLIGPNAQGVANFSTGAVMNFSTMFMEVAPQDGPVAIVSQSGAASVMPYAMLRERGVGVRYLVASGNDADATVCELALAAAADPAIRVVLMYIESLNDPAMLAEVARLAAARG 243

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BLAST of mRNA_P-wetherbeei_contig53432.1.1 vs. uniprot
Match: A0A1H7EBA5_9BURK (Acyl-CoA synthetase (NDP forming) n=2 Tax=unclassified Variovorax TaxID=663243 RepID=A0A1H7EBA5_9BURK)

HSP 1 Score: 271 bits (692), Expect = 5.810e-84
Identity = 140/179 (78.21%), Postives = 154/179 (86.03%), Query Frame = 0

Query:    1 SLADVPETPDVVVLAVGQEQVPEMVRQCATRGVGTAVVMSSGFGETGAEGVERQRVLVEQARHLGVRLVGPNAQGIANFRTGAVLNFSTMFMEIAPKDGPVAIISQSGAASVMPYAMLRERDIGVRYLVASGNDADASVSELALVAAADPEIRVVLLYIESLSDPETLAEVARLACARG 179
            SL  VPE PDV ++AVGQ+ VP ++ QCA RGVG A+VMSSGFGETG+ GV  Q  LV QAR LGVRLVGPNAQG+ANF TGAV+NFSTMFME+AP+DGP+AI+SQSGAASVMPYAMLRER IGVRYLVASGNDADASV ELAL AAADPEIRVVL+YIESL DP  LAEVARL  ARG
Sbjct:   65 SLDAVPEVPDVAIVAVGQDAVPGVIDQCAARGVGAAIVMSSGFGETGSAGVALQHALVAQARRLGVRLVGPNAQGVANFSTGAVMNFSTMFMEVAPQDGPIAIVSQSGAASVMPYAMLRERGIGVRYLVASGNDADASVCELALAAAADPEIRVVLMYIESLGDPAMLAEVARLTAARG 243

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BLAST of mRNA_P-wetherbeei_contig53432.1.1 vs. uniprot
Match: A0A2W5RVM9_VARPD (CoA-binding protein n=1 Tax=Variovorax paradoxus TaxID=34073 RepID=A0A2W5RVM9_VARPD)

HSP 1 Score: 270 bits (690), Expect = 8.140e-84
Identity = 135/179 (75.42%), Postives = 157/179 (87.71%), Query Frame = 0

Query:    1 SLADVPETPDVVVLAVGQEQVPEMVRQCATRGVGTAVVMSSGFGETGAEGVERQRVLVEQARHLGVRLVGPNAQGIANFRTGAVLNFSTMFMEIAPKDGPVAIISQSGAASVMPYAMLRERDIGVRYLVASGNDADASVSELALVAAADPEIRVVLLYIESLSDPETLAEVARLACARG 179
            SLAD+PE PD  ++AVGQ+ V +++ QC  RG+GTA+VMSSGFGETGA G ERQ  LV QAR LGVRL+GPNAQG+ANFRTGAV+NFSTMFME+ P+DGPVAI+SQSGAASVMPYAMLRER +GVRY+VASGNDADASV+ELAL AAADP+IRVVL+YIE+L+DP  LAEVAR   ARG
Sbjct:   65 SLADLPEVPDAAIVAVGQDAVADVIGQCGARGIGTAIVMSSGFGETGAAGTERQHDLVAQARRLGVRLIGPNAQGLANFRTGAVMNFSTMFMEVPPQDGPVAIVSQSGAASVMPYAMLRERGVGVRYVVASGNDADASVNELALAAAADPQIRVVLMYIEALADPAVLAEVARTTRARG 243

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BLAST of mRNA_P-wetherbeei_contig53432.1.1 vs. uniprot
Match: UPI00164DC65C (Acetate--CoA ligase family protein n=2 Tax=Ramlibacter sp. GTP1 TaxID=2079448 RepID=UPI00164DC65C)

HSP 1 Score: 268 bits (685), Expect = 4.030e-83
Identity = 140/179 (78.21%), Postives = 158/179 (88.27%), Query Frame = 0

Query:    1 SLADVPETPDVVVLAVGQEQVPEMVRQCATRGVGTAVVMSSGFGETGAEGVERQRVLVEQARHLGVRLVGPNAQGIANFRTGAVLNFSTMFMEIAPKDGPVAIISQSGAASVMPYAMLRERDIGVRYLVASGNDADASVSELALVAAADPEIRVVLLYIESLSDPETLAEVARLACARG 179
            SLAD+PE PDV VLAV  +QV  ++RQCA RGV +AVVMSSGFGETGA G +RQ  LVE+AR LGVRL+GPNAQG+ANF+TGAVLNFSTMFME+ P+DGPVA+ISQSGAASVMPYA+LRER IGVRY+VASGNDADASV ELAL AAADP+IRV+LLYIESLSDP  LAE ARLA +RG
Sbjct:   64 SLADLPEAPDVAVLAVAGDQVQGVLRQCAARGVRSAVVMSSGFGETGAAGAQRQAQLVEEARALGVRLIGPNAQGVANFQTGAVLNFSTMFMEVPPQDGPVAVISQSGAASVMPYALLRERGIGVRYVVASGNDADASVCELALTAAADPDIRVLLLYIESLSDPAMLAEAARLARSRG 242

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BLAST of mRNA_P-wetherbeei_contig53432.1.1 vs. uniprot
Match: UPI0008246DAD (acetate--CoA ligase family protein n=1 Tax=Xylophilus ampelinus TaxID=54067 RepID=UPI0008246DAD)

HSP 1 Score: 268 bits (685), Expect = 4.460e-83
Identity = 135/179 (75.42%), Postives = 156/179 (87.15%), Query Frame = 0

Query:    1 SLADVPETPDVVVLAVGQEQVPEMVRQCATRGVGTAVVMSSGFGETGAEGVERQRVLVEQARHLGVRLVGPNAQGIANFRTGAVLNFSTMFMEIAPKDGPVAIISQSGAASVMPYAMLRERDIGVRYLVASGNDADASVSELALVAAADPEIRVVLLYIESLSDPETLAEVARLACARG 179
            SLAD+PE PD  ++AVGQ+ V +++ QC  RG+GTA+VMSSGFGETGA GV RQR L+ QAR LGVRL+GPNAQG+ANF TGAV+NFSTMFME+ P+DGPVAI+SQSGAASVMPYAMLRER +GVRYLVASGNDADASV+ELAL AAADP IRVVL+YIE+L+DP  LAEVA  A ARG
Sbjct:   65 SLADLPEVPDAAIVAVGQDGVADVIGQCGARGIGTAIVMSSGFGETGAPGVVRQRELLAQARRLGVRLIGPNAQGVANFHTGAVMNFSTMFMEVPPQDGPVAIVSQSGAASVMPYAMLRERGVGVRYLVASGNDADASVNELALAAAADPHIRVVLMYIEALADPAVLAEVAHTARARG 243

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BLAST of mRNA_P-wetherbeei_contig53432.1.1 vs. uniprot
Match: I3UAX4_ADVKW (CoA-binding domain-containing protein n=5 Tax=Advenella TaxID=290425 RepID=I3UAX4_ADVKW)

HSP 1 Score: 267 bits (682), Expect = 1.160e-82
Identity = 133/179 (74.30%), Postives = 157/179 (87.71%), Query Frame = 0

Query:    1 SLADVPETPDVVVLAVGQEQVPEMVRQCATRGVGTAVVMSSGFGETGAEGVERQRVLVEQARHLGVRLVGPNAQGIANFRTGAVLNFSTMFMEIAPKDGPVAIISQSGAASVMPYAMLRERDIGVRYLVASGNDADASVSELALVAAADPEIRVVLLYIESLSDPETLAEVARLACARG 179
            SLA++PETPDV ++AVGQ+ V +++ QCAT+ +   ++MSSGFGETG+ GV+RQ  LV+QAR LG+RLVGPNAQG+ANF TGAV+NFSTMFMEI P+DGPVAIISQSGAASVMPYAMLRER +GVRYL+ASGNDADASV ELAL AA DPEIRV+LLYIESL+DP  LAE ARLA +RG
Sbjct:   65 SLAELPETPDVAIVAVGQDAVADVIEQCATQAIACVILMSSGFGETGSAGVQRQTALVQQARRLGLRLVGPNAQGVANFHTGAVMNFSTMFMEIEPEDGPVAIISQSGAASVMPYAMLRERGVGVRYLIASGNDADASVCELALAAAVDPEIRVILLYIESLADPAMLAETARLAISRG 243

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig53432.1.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig53432.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
UPI000E0D2D1B	4.700e-98	89.94	acetate--CoA ligase family protein n=1 Tax=Rhodofe...	[more]
UPI0004914364	2.140e-92	85.47	acetate--CoA ligase family protein n=1 Tax=Azohydr...	[more]
A0A520GB17_9BURK	3.810e-85	77.65	CoA-binding protein n=1 Tax=Variovorax sp. TaxID=1...	[more]
UPI001F399C7D	1.180e-84	79.33	acetate--CoA ligase family protein n=1 Tax=Caenimo...	[more]
T1XI84_VARPD	1.490e-84	77.09	Putative acyl-CoA ligase n=2 Tax=Variovorax parado...	[more]
A0A1H7EBA5_9BURK	5.810e-84	78.21	Acyl-CoA synthetase (NDP forming) n=2 Tax=unclassi...	[more]
A0A2W5RVM9_VARPD	8.140e-84	75.42	CoA-binding protein n=1 Tax=Variovorax paradoxus T...	[more]
UPI00164DC65C	4.030e-83	78.21	Acetate--CoA ligase family protein n=2 Tax=Ramliba...	[more]
UPI0008246DAD	4.460e-83	75.42	acetate--CoA ligase family protein n=1 Tax=Xylophi...	[more]
I3UAX4_ADVKW	1.160e-82	74.30	CoA-binding domain-containing protein n=5 Tax=Adve...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003781	CoA-binding	PFAM	PF13380	CoA_binding_2	coord: 1..76 e-value: 3.5E-6 score: 27.5
None	No IPR available	GENE3D	3.40.50.720		coord: 1..72 e-value: 1.4E-19 score: 72.5
None	No IPR available	PANTHER	PTHR42793:SF2	PEPTIDYL-LYSINE N-ACETYLTRANSFERASE PATZ	coord: 1..178
None	No IPR available	PANTHER	PTHR42793	COA BINDING DOMAIN CONTAINING PROTEIN	coord: 1..178
IPR032875	Succinyl-CoA synthetase-like, flavodoxin domain	PFAM	PF13607	Succ_CoA_lig	coord: 99..176 e-value: 1.7E-19 score: 70.0
IPR016102	Succinyl-CoA synthetase-like	GENE3D	3.40.50.261		coord: 74..179 e-value: 1.1E-20 score: 75.9
IPR016102	Succinyl-CoA synthetase-like	SUPERFAMILY	52210	Succinyl-CoA synthetase domains	coord: 75..175
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 1..72

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig53432	contig	P-wetherbeei_contig53432:2..538 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig53432.1.1	mRNA_P-wetherbeei_contig53432.1.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig53432 2..538 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig53432.1.1 ID=prot_P-wetherbeei_contig53432.1.1|Name=mRNA_P-wetherbeei_contig53432.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=179bp
SLADVPETPDVVVLAVGQEQVPEMVRQCATRGVGTAVVMSSGFGETGAEG
VERQRVLVEQARHLGVRLVGPNAQGIANFRTGAVLNFSTMFMEIAPKDGP
VAIISQSGAASVMPYAMLRERDIGVRYLVASGNDADASVSELALVAAADP
EIRVVLLYIESLSDPETLAEVARLACARG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003781	CoA-bd
IPR032875	Succ_CoA_lig_flav_dom
IPR016102	Succinyl-CoA_synth-like
IPR036291	NAD(P)-bd_dom_sf