prot_P-wetherbeei_contig53403.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig53403.1.1
Unique Nameprot_P-wetherbeei_contig53403.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length48
Homology
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BLAST of mRNA_P-wetherbeei_contig53403.1.1 vs. uniprot
Match: A0A8F9IHT1_ECOLX (Colicin n=2 Tax=Escherichia coli TaxID=562 RepID=A0A8F9IHT1_ECOLX)

HSP 1 Score: 47.4 bits (111), Expect = 3.060e-5
Identity = 21/35 (60.00%), Postives = 25/35 (71.43%), Query Frame = 0 
Query:    4 DDYELWNNVHTATLLDYNLQELDADRNRNLFHPDA 38
            D YELWNNVHTATL D+ +++ D      LFHPDA
Sbjct:  109 DGYELWNNVHTATLEDFKIKDTD------LFHPDA 137
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig53403.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A8F9IHT1_ECOLX3.060e-560.00Colicin n=2 Tax=Escherichia coli TaxID=562 RepID=A... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig53403contigP-wetherbeei_contig53403:395..538 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig53403.1.1mRNA_P-wetherbeei_contig53403.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig53403 395..538 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig53403.1.1 ID=prot_P-wetherbeei_contig53403.1.1|Name=mRNA_P-wetherbeei_contig53403.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=48bp
GAGDDYELWNNVHTATLLDYNLQELDADRNRNLFHPDAWPLFRGEID*
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