prot_P-wetherbeei_contig53275.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig53275.1.1
Unique Nameprot_P-wetherbeei_contig53275.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length48
Homology
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BLAST of mRNA_P-wetherbeei_contig53275.1.1 vs. uniprot
Match: H0TNH0_9BRAD (Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 TaxID=551947 RepID=H0TNH0_9BRAD)

HSP 1 Score: 58.2 bits (139), Expect = 7.250e-10
Identity = 32/49 (65.31%), Postives = 35/49 (71.43%), Query Frame = 0 
Query:    1 ACWTLRNRFAKRRRPARDFR-TGSGRIAQLVEQMTLNHRVPGSSPGAPT 48
            +CWT  NRFAKR    + F    SGRIAQLVEQ+TLN RV GSSP APT
Sbjct:    7 SCWTSGNRFAKRPALVKVFPDASSGRIAQLVEQLTLNQRVLGSSPSAPT 55
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig53275.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
H0TNH0_9BRAD7.250e-1065.31Uncharacterized protein n=1 Tax=Bradyrhizobium sp.... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableANTIFAMANF00010Spurious_ORF_10coord: 24..48
e-value: 5.9E-11
score: 39.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig53275contigP-wetherbeei_contig53275:240..383 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig53275.1.1mRNA_P-wetherbeei_contig53275.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig53275 240..383 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig53275.1.1 ID=prot_P-wetherbeei_contig53275.1.1|Name=mRNA_P-wetherbeei_contig53275.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=48bp
ACWTLRNRFAKRRRPARDFRTGSGRIAQLVEQMTLNHRVPGSSPGAPT
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