prot_P-wetherbeei_contig53265.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig53265.1.1
Unique Name	prot_P-wetherbeei_contig53265.1.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	98

Homology

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BLAST of mRNA_P-wetherbeei_contig53265.1.1 vs. uniprot
Match: A0A8I0C6K2_9CAUL (Helix-turn-helix transcriptional regulator n=1 Tax=Phenylobacterium sp. TaxID=1871053 RepID=A0A8I0C6K2_9CAUL)

HSP 1 Score: 114 bits (285), Expect = 6.010e-31
Identity = 61/90 (67.78%), Postives = 70/90 (77.78%), Query Frame = 0

Query:    4 DAPSKIDLATNARSAADLLRVLANPHRLQVLCGLRTGELSVGQIADHVDLSQSALSQHLARLRLDRVVATRRQGQTIYYRIADPDVMTVL 93
            DAP   DLA  A  AADLLR+LAN  RLQ+LC LR+GE SVG++A  V LS SALSQHLARLR D +VA RR+ QTI+YRIADPDVM +L
Sbjct:    3 DAPPLEDLARRAAGAADLLRLLANERRLQILCVLRSGERSVGELAAAVGLSPSALSQHLARLRADHLVAPRRRAQTIFYRIADPDVMRLL 92

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BLAST of mRNA_P-wetherbeei_contig53265.1.1 vs. uniprot
Match: UPI000422FC4F (metalloregulator ArsR/SmtB family transcription factor n=2 Tax=Solimonas TaxID=413435 RepID=UPI000422FC4F)

HSP 1 Score: 103 bits (257), Expect = 9.160e-27
Identity = 55/98 (56.12%), Postives = 73/98 (74.49%), Query Frame = 0

Query:    1 MTQDAPSKIDLATNARSAADLLRVLANPHRLQVLCGLRTGELSVGQIADHVDLSQSALSQHLARLRLDRVVATRRQGQTIYYRIADPDVMTVLAVVSG 98
            +T++A ++  +AT+A  AA LLR LA+PHRLQVLC L  GE SVG++   V LSQSALSQHLARLR + +V+TRR+GQTIYY +AD   + V+  + G
Sbjct:    4 VTEEAAAQ--MATHAEEAAQLLRALASPHRLQVLCALAGGEHSVGELNARVGLSQSALSQHLARLRDEGLVSTRREGQTIYYALADGPALAVIEALHG 99

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BLAST of mRNA_P-wetherbeei_contig53265.1.1 vs. uniprot
Match: W9BRQ2_9SPHN (ArsR family transcriptional regulator n=5 Tax=Sphingomonadales TaxID=204457 RepID=W9BRQ2_9SPHN)

HSP 1 Score: 102 bits (255), Expect = 2.010e-26
Identity = 52/88 (59.09%), Postives = 67/88 (76.14%), Query Frame = 0

Query:   11 LATNARSAADLLRVLANPHRLQVLCGLRTGELSVGQIADHVDLSQSALSQHLARLRLDRVVATRRQGQTIYYRIADPDVMTVLAVVSG 98
            +A  A  AA +LR+LANPHRLQVLC L  GE+SVG +   V LSQSALSQHLARLR + +V TRR+G +I+YRIADP V+ ++ V++ 
Sbjct:   14 MAAKAEEAAHMLRLLANPHRLQVLCLLVEGEMSVGAVQQQVALSQSALSQHLARLREEGLVETRREGTSIFYRIADPAVLQIMQVLAA 101

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BLAST of mRNA_P-wetherbeei_contig53265.1.1 vs. uniprot
Match: A0A7L5ZB14_9CAUL (Winged helix-turn-helix transcriptional regulator n=1 Tax=Brevundimonas sp. TaxID=1871086 RepID=A0A7L5ZB14_9CAUL)

HSP 1 Score: 102 bits (254), Expect = 2.770e-26
Identity = 56/97 (57.73%), Postives = 69/97 (71.13%), Query Frame = 0

Query:    1 MTQDAPSKIDLATNARSAADLLRVLANPHRLQVLCGLRTGELSVGQIADHVDLSQSALSQHLARLRLDRVVATRRQGQTIYYRIADPDVMTVLAVVS 97
            +T DAP+   L  +A  AA LL+ LAN HRL +LC L TGE+ V QI   V LSQSALSQHLARLR D +VATRR+G  I+YRI DP V+ V+A ++
Sbjct:    2 ITADAPTLDALEQSAAHAAALLKSLANEHRLMILCQLGTGEMQVAQILSGVKLSQSALSQHLARLREDGLVATRREGVAIFYRIDDPAVLKVIATLA 98

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BLAST of mRNA_P-wetherbeei_contig53265.1.1 vs. uniprot
Match: A0A0J7XHR8_9SPHN (ArsR family transcriptional regulator n=2 Tax=Sphingomonadaceae TaxID=41297 RepID=A0A0J7XHR8_9SPHN)

HSP 1 Score: 102 bits (254), Expect = 3.020e-26
Identity = 58/94 (61.70%), Postives = 66/94 (70.21%), Query Frame = 0

Query:    7 SKIDLAT---NARSAADLLRVLANPHRLQVLCGLRTGELSVGQIADHVDLSQSALSQHLARLRLDRVVATRRQGQTIYYRIADPDVMTVLAVVS 97
            +K DL T   NA  AA LLRVLAN  RL +LC L  GELSVGQI   V LSQSALSQHLA LR + +VATRR  QTIYYRI DP  + V+A ++
Sbjct:    5 AKFDLTTFEANAARAATLLRVLANERRLMILCQLADGELSVGQIQPRVGLSQSALSQHLALLREEGIVATRRAAQTIYYRIVDPAALRVIATLA 98

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BLAST of mRNA_P-wetherbeei_contig53265.1.1 vs. uniprot
Match: A0A3E1K9K1_9GAMM (ArsR family transcriptional regulator n=1 Tax=Wenzhouxiangella sediminis TaxID=1792836 RepID=A0A3E1K9K1_9GAMM)

HSP 1 Score: 100 bits (250), Expect = 1.410e-25
Identity = 54/89 (60.67%), Postives = 68/89 (76.40%), Query Frame = 0

Query:    6 PSKIDLATN-ARSAADLLRVLANPHRLQVLCGLRTGELSVGQIADHVDLSQSALSQHLARLRLDRVVATRRQGQTIYYRIADPDVMTVL 93
            P   DL ++ AR AA LLR LANP RL +LC L  GE SVG++ + + +SQSALSQHLARLR +++VATRRQ QTIYYRIADP V+ ++
Sbjct:   10 PDLADLDSDQARQAATLLRALANPTRLMLLCSLVEGEHSVGELNERIPMSQSALSQHLARLREEQLVATRRQSQTIYYRIADPMVLELI 98

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BLAST of mRNA_P-wetherbeei_contig53265.1.1 vs. uniprot
Match: UPI0010A9FC8F (metalloregulator ArsR/SmtB family transcription factor n=1 Tax=Nitratireductor sp. XY-223 TaxID=2561926 RepID=UPI0010A9FC8F)

HSP 1 Score: 99.4 bits (246), Expect = 4.960e-25
Identity = 52/98 (53.06%), Postives = 66/98 (67.35%), Query Frame = 0

Query:    1 MTQDAPSKIDLATNARSAADLLRVLANPHRLQVLCGLRTGELSVGQIADHVDLSQSALSQHLARLRLDRVVATRRQGQTIYYRIADPDVMTVLAVVSG 98
            + QD   + DL+ NA  AA LL  +ANP RL +LC L  GE++VG +A  VDLSQSALSQHLA+LR  ++V TRR  QTIYY +A  +V  VL  + G
Sbjct:    4 IVQDRAGQADLSGNAEQAAQLLAAMANPKRLLILCNLVGGEMAVGALATTVDLSQSALSQHLAKLRALKLVKTRRDAQTIYYSLASEEVQAVLETLYG 101

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BLAST of mRNA_P-wetherbeei_contig53265.1.1 vs. uniprot
Match: A0A1Y6BFK6_9ALTE (Transcriptional regulator, ArsR family n=1 Tax=Alteromonadaceae bacterium Bs31 TaxID=1304903 RepID=A0A1Y6BFK6_9ALTE)

HSP 1 Score: 99.0 bits (245), Expect = 6.460e-25
Identity = 54/87 (62.07%), Postives = 63/87 (72.41%), Query Frame = 0

Query:    9 IDLATNARSAADLLRVLANPHRLQVLCGLRTGELSVGQIADHVDLSQSALSQHLARLRLDRVVATRRQGQTIYYRIADPDVMTVLAV 95
            +D+  NA SAA LL+ LANPHRL VLC L + E+SV +I   VDLSQSALSQHLARLR D +V TRR  QTIYY IAD   M ++ V
Sbjct:   13 VDVQKNADSAASLLKNLANPHRLLVLCVLASKEMSVSEINACVDLSQSALSQHLARLRADNLVITRRDSQTIYYSIADGPAMQLIHV 99

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BLAST of mRNA_P-wetherbeei_contig53265.1.1 vs. uniprot
Match: A0A353PH04_9GAMM (Transcriptional regulator n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A353PH04_9GAMM)

HSP 1 Score: 98.6 bits (244), Expect = 6.540e-25
Identity = 49/85 (57.65%), Postives = 64/85 (75.29%), Query Frame = 0

Query:   11 LATNARSAADLLRVLANPHRLQVLCGLRTGELSVGQIADHVDLSQSALSQHLARLRLDRVVATRRQGQTIYYRIADPDVMTVLAV 95
            ++T+A +AADLL+ LANPHRLQ+LC L  GELSVG +   + LSQSALSQHLA LR D +VATRR+ QTI+YR+     + ++ V
Sbjct:    1 MSTHAHTAADLLKALANPHRLQILCALAEGELSVGALNARIPLSQSALSQHLAVLRKDDLVATRRESQTIFYRVMPGPALDLIQV 85

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BLAST of mRNA_P-wetherbeei_contig53265.1.1 vs. uniprot
Match: A0A2E4QVU0_9PROT (ArsR family transcriptional regulator n=1 Tax=Hirschia sp. TaxID=2024835 RepID=A0A2E4QVU0_9PROT)

HSP 1 Score: 99.0 bits (245), Expect = 6.650e-25
Identity = 52/83 (62.65%), Postives = 59/83 (71.08%), Query Frame = 0

Query:    4 DAPSKIDLATNARSAADLLRVLANPHRLQVLCGLRTGELSVGQIADHVDLSQSALSQHLARLRLDRVVATRRQGQTIYYRIAD 86
            D PS +     A  AA LLR LAN HRL +LC L  GE SVGQ+ +  DLSQSALSQHLA LR D +VATRR+GQ I+YRIAD
Sbjct:    5 DLPSPVAFQEKATLAAGLLRSLANEHRLMILCRLGMGEQSVGQLQEEFDLSQSALSQHLAMLRRDGIVATRREGQVIHYRIAD 87

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig53265.1.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig53265.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A8I0C6K2_9CAUL	6.010e-31	67.78	Helix-turn-helix transcriptional regulator n=1 Tax...	[more]
UPI000422FC4F	9.160e-27	56.12	metalloregulator ArsR/SmtB family transcription fa...	[more]
W9BRQ2_9SPHN	2.010e-26	59.09	ArsR family transcriptional regulator n=5 Tax=Sphi...	[more]
A0A7L5ZB14_9CAUL	2.770e-26	57.73	Winged helix-turn-helix transcriptional regulator ...	[more]
A0A0J7XHR8_9SPHN	3.020e-26	61.70	ArsR family transcriptional regulator n=2 Tax=Sphi...	[more]
A0A3E1K9K1_9GAMM	1.410e-25	60.67	ArsR family transcriptional regulator n=1 Tax=Wenz...	[more]
UPI0010A9FC8F	4.960e-25	53.06	metalloregulator ArsR/SmtB family transcription fa...	[more]
A0A1Y6BFK6_9ALTE	6.460e-25	62.07	Transcriptional regulator, ArsR family n=1 Tax=Alt...	[more]
A0A353PH04_9GAMM	6.540e-25	57.65	Transcriptional regulator n=3 Tax=Gammaproteobacte...	[more]
A0A2E4QVU0_9PROT	6.650e-25	62.65	ArsR family transcriptional regulator n=1 Tax=Hirs...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001845	HTH ArsR-type DNA-binding domain	PRINTS	PR00778	HTHARSR	coord: 54..69 score: 41.88 coord: 69..84 score: 33.12 coord: 41..52 score: 31.11 coord: 22..37 score: 34.58
IPR001845	HTH ArsR-type DNA-binding domain	SMART	SM00418	arsrmega2	coord: 20..98 e-value: 2.0E-26 score: 103.8
IPR001845	HTH ArsR-type DNA-binding domain	PFAM	PF01022	HTH_5	coord: 27..71 e-value: 1.6E-13 score: 50.3
IPR001845	HTH ArsR-type DNA-binding domain	PROSITE	PS50987	HTH_ARSR_2	coord: 11..98 score: 20.880003
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 2..97 e-value: 1.5E-26 score: 94.3
None	No IPR available	PANTHER	PTHR33154	TRANSCRIPTIONAL REGULATOR, ARSR FAMILY	coord: 8..96
None	No IPR available	PANTHER	PTHR33154:SF28	HTH-TYPE TRANSCRIPTIONAL REGULATOR YGAV-RELATED	coord: 8..96
IPR011991	ArsR-like helix-turn-helix domain	CDD	cd00090	HTH_ARSR	coord: 22..88 e-value: 2.57724E-18 score: 70.4053
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 15..95

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig53265	contig	P-wetherbeei_contig53265:245..538 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig53265.1.1	mRNA_P-wetherbeei_contig53265.1.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig53265 245..538 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig53265.1.1 ID=prot_P-wetherbeei_contig53265.1.1|Name=mRNA_P-wetherbeei_contig53265.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=98bp
MTQDAPSKIDLATNARSAADLLRVLANPHRLQVLCGLRTGELSVGQIADH
VDLSQSALSQHLARLRLDRVVATRRQGQTIYYRIADPDVMTVLAVVSG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001845	HTH_ArsR_DNA-bd_dom
IPR036388	WH-like_DNA-bd_sf
IPR011991	ArsR-like_HTH
IPR036390	WH_DNA-bd_sf