prot_P-wetherbeei_contig53207.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig53207.1.1
Unique Nameprot_P-wetherbeei_contig53207.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length58
Homology
BLAST of mRNA_P-wetherbeei_contig53207.1.1 vs. uniprot
Match: A0A7S4DFG8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DFG8_HETAK)

HSP 1 Score: 84.7 bits (208), Expect = 4.130e-19
Identity = 37/50 (74.00%), Postives = 45/50 (90.00%), Query Frame = 0
Query:    1 MSVVGQFNLGFIITQLGSDLFIMDQHACDEKHNFEALQRTTIMHQQPLVR 50
            M +VGQFNLGFII +LG+DLFI+DQHACDEK+NFE LQRTT +H+Q L+R
Sbjct:   53 MRIVGQFNLGFIIARLGADLFILDQHACDEKYNFETLQRTTAIHEQRLIR 102          
BLAST of mRNA_P-wetherbeei_contig53207.1.1 vs. uniprot
Match: D7FV66_ECTSI (Postmeiotic segregation increased 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV66_ECTSI)

HSP 1 Score: 87.0 bits (214), Expect = 1.370e-18
Identity = 40/50 (80.00%), Postives = 45/50 (90.00%), Query Frame = 0
Query:    1 MSVVGQFNLGFIITQLGSDLFIMDQHACDEKHNFEALQRTTIMHQQPLVR 50
            M VVGQFNLGF+I  LGSDLFI+DQHACDEK+NFE LQ+TT +HQQPLVR
Sbjct:  709 MRVVGQFNLGFMICLLGSDLFILDQHACDEKYNFEVLQQTTTIHQQPLVR 758          
BLAST of mRNA_P-wetherbeei_contig53207.1.1 vs. uniprot
Match: UPI001ED8B9E1 (mismatch repair endonuclease PMS2 n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED8B9E1)

HSP 1 Score: 84.0 bits (206), Expect = 1.660e-17
Identity = 38/49 (77.55%), Postives = 44/49 (89.80%), Query Frame = 0
Query:    1 MSVVGQFNLGFIITQLGSDLFIMDQHACDEKHNFEALQRTTIMHQQPLV 49
            M V+GQFNLGF+IT+LGSDLFI+DQHA DEK+NFE LQRTT + QQPLV
Sbjct:  752 MEVIGQFNLGFLITKLGSDLFIIDQHASDEKYNFETLQRTTCLQQQPLV 800          
BLAST of mRNA_P-wetherbeei_contig53207.1.1 vs. uniprot
Match: A0A833X1G2_PHYIN (MutL C terminal dimerization domain n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833X1G2_PHYIN)

HSP 1 Score: 83.6 bits (205), Expect = 2.270e-17
Identity = 38/50 (76.00%), Postives = 45/50 (90.00%), Query Frame = 0
Query:    1 MSVVGQFNLGFIITQLGSDLFIMDQHACDEKHNFEALQRTTIMHQQPLVR 50
            M V+GQFNLGFII +LG+DLFI+DQHA DEK N+E LQ+TT+MHQQPLVR
Sbjct:  606 MQVLGQFNLGFIIGKLGNDLFIIDQHASDEKFNYETLQQTTVMHQQPLVR 655          
BLAST of mRNA_P-wetherbeei_contig53207.1.1 vs. uniprot
Match: A0A5D6YGR8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YGR8_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 2.270e-17
Identity = 37/50 (74.00%), Postives = 44/50 (88.00%), Query Frame = 0
Query:    1 MSVVGQFNLGFIITQLGSDLFIMDQHACDEKHNFEALQRTTIMHQQPLVR 50
            M V+GQFNLGF+I +LG DLFI+DQHA DEK NFE LQ+TT++HQQPLVR
Sbjct:  636 MQVLGQFNLGFVIAKLGDDLFIVDQHASDEKFNFETLQQTTVLHQQPLVR 685          
BLAST of mRNA_P-wetherbeei_contig53207.1.1 vs. uniprot
Match: A0A080YYD1_PHYPR (Uncharacterized protein n=1 Tax=Phytophthora parasitica P1976 TaxID=1317066 RepID=A0A080YYD1_PHYPR)

HSP 1 Score: 82.0 bits (201), Expect = 7.850e-17
Identity = 39/56 (69.64%), Postives = 47/56 (83.93%), Query Frame = 0
Query:    1 MSVVGQFNLGFIITQLGSDLFIMDQHACDEKHNFEALQRTTIMHQQPLVRRAMGKL 56
            M V+GQFNLGFII +L +DLFI+DQHA DEK N+E LQ+TT+MHQQPLVR  M +L
Sbjct:  391 MEVLGQFNLGFIIGKLDNDLFIIDQHASDEKFNYETLQQTTVMHQQPLVRPLMLEL 446          
BLAST of mRNA_P-wetherbeei_contig53207.1.1 vs. uniprot
Match: H3G7I0_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G7I0_PHYRM)

HSP 1 Score: 82.0 bits (201), Expect = 7.880e-17
Identity = 39/56 (69.64%), Postives = 47/56 (83.93%), Query Frame = 0
Query:    1 MSVVGQFNLGFIITQLGSDLFIMDQHACDEKHNFEALQRTTIMHQQPLVRRAMGKL 56
            M V+GQFNLGFII +L +DLFI+DQHA DEK N+E LQ+TT+MHQQPLVR  M +L
Sbjct:  555 MEVLGQFNLGFIIGKLDNDLFIIDQHASDEKFNYETLQQTTVMHQQPLVRPLMLEL 610          
BLAST of mRNA_P-wetherbeei_contig53207.1.1 vs. uniprot
Match: W2Y1T4_PHYPR (Uncharacterized protein n=1 Tax=Phytophthora parasitica P10297 TaxID=1317064 RepID=W2Y1T4_PHYPR)

HSP 1 Score: 82.0 bits (201), Expect = 7.890e-17
Identity = 39/56 (69.64%), Postives = 47/56 (83.93%), Query Frame = 0
Query:    1 MSVVGQFNLGFIITQLGSDLFIMDQHACDEKHNFEALQRTTIMHQQPLVRRAMGKL 56
            M V+GQFNLGFII +L +DLFI+DQHA DEK N+E LQ+TT+MHQQPLVR  M +L
Sbjct:  575 MEVLGQFNLGFIIGKLDNDLFIIDQHASDEKFNYETLQQTTVMHQQPLVRPLMLEL 630          
BLAST of mRNA_P-wetherbeei_contig53207.1.1 vs. uniprot
Match: A0A0W8CYU8_PHYNI (Mismatch repair endonuclease pms1 n=21 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CYU8_PHYNI)

HSP 1 Score: 82.0 bits (201), Expect = 7.890e-17
Identity = 39/56 (69.64%), Postives = 47/56 (83.93%), Query Frame = 0
Query:    1 MSVVGQFNLGFIITQLGSDLFIMDQHACDEKHNFEALQRTTIMHQQPLVRRAMGKL 56
            M V+GQFNLGFII +L +DLFI+DQHA DEK N+E LQ+TT+MHQQPLVR  M +L
Sbjct:  607 MEVLGQFNLGFIIGKLDNDLFIIDQHASDEKFNYETLQQTTVMHQQPLVRPLMLEL 662          
BLAST of mRNA_P-wetherbeei_contig53207.1.1 vs. uniprot
Match: A0A6A3WZ68_9STRA (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3WZ68_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 7.890e-17
Identity = 39/56 (69.64%), Postives = 47/56 (83.93%), Query Frame = 0
Query:    1 MSVVGQFNLGFIITQLGSDLFIMDQHACDEKHNFEALQRTTIMHQQPLVRRAMGKL 56
            M V+GQFNLGFII +L +DLFI+DQHA DEK N+E LQ+TT+MHQQPLVR  M +L
Sbjct:  628 MEVLGQFNLGFIIGKLDNDLFIIDQHASDEKFNYETLQQTTVMHQQPLVRPLMLEL 683          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig53207.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4DFG8_HETAK4.130e-1974.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
D7FV66_ECTSI1.370e-1880.00Postmeiotic segregation increased 2 n=2 Tax=Ectoca... [more]
UPI001ED8B9E11.660e-1777.55mismatch repair endonuclease PMS2 n=1 Tax=Ischnura... [more]
A0A833X1G2_PHYIN2.270e-1776.00MutL C terminal dimerization domain n=1 Tax=Phytop... [more]
A0A5D6YGR8_9STRA2.270e-1774.00Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A080YYD1_PHYPR7.850e-1769.64Uncharacterized protein n=1 Tax=Phytophthora paras... [more]
H3G7I0_PHYRM7.880e-1769.64Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
W2Y1T4_PHYPR7.890e-1769.64Uncharacterized protein n=1 Tax=Phytophthora paras... [more]
A0A0W8CYU8_PHYNI7.890e-1769.64Mismatch repair endonuclease pms1 n=21 Tax=Phytoph... [more]
A0A6A3WZ68_9STRA7.890e-1769.64Uncharacterized protein n=6 Tax=Phytophthora TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042120MutL, C-terminal domain, dimerisation subdomainGENE3D3.30.1540.20coord: 1..56
e-value: 8.3E-14
score: 53.2
IPR014790MutL, C-terminal, dimerisationPFAMPF08676MutL_Ccoord: 3..49
e-value: 2.3E-11
score: 43.6
IPR038973DNA mismatch repair protein MutL/Mlh/PmsPANTHERPTHR10073DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTLcoord: 1..50
NoneNo IPR availablePANTHERPTHR10073:SF52MISMATCH REPAIR ENDONUCLEASE PMS2-RELATEDcoord: 1..50
IPR037198MutL, C-terminal domain superfamilySUPERFAMILY118116DNA mismatch repair protein MutLcoord: 3..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig53207contigP-wetherbeei_contig53207:153..326 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig53207.1.1mRNA_P-wetherbeei_contig53207.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig53207 108..540 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig53207.1.1 ID=prot_P-wetherbeei_contig53207.1.1|Name=mRNA_P-wetherbeei_contig53207.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=58bp
MSVVGQFNLGFIITQLGSDLFIMDQHACDEKHNFEALQRTTIMHQQPLVR
RAMGKLG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042120MutL_C_dimsub
IPR014790MutL_C
IPR038973MutL/Mlh/Pms
IPR037198MutL_C_sf