prot_P-wetherbeei_contig5311.4.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig5311.4.1
Unique Nameprot_P-wetherbeei_contig5311.4.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length243
Homology
BLAST of mRNA_P-wetherbeei_contig5311.4.1 vs. uniprot
Match: A0A3C0TSX7_9PROT (GGDEF domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TSX7_9PROT)

HSP 1 Score: 306 bits (783), Expect = 1.730e-102
Identity = 164/237 (69.20%), Postives = 191/237 (80.59%), Query Frame = 0
Query:    1 MKITDPKALNTVRSAAAPAAGKVRSGQTRDARAAIDTASVMGIPQAEFTPKVRDAIMNLMQEVDRFRQDLEGAKRRIEHLERLAEHDVLTPVLNRRGFVREMTRIKSFADRYNAPATLVFFDLNNFKPVNDTFGHAAGDAVLQQVAQVLVDNTRDSDIVGRLGGDEFGVILVNNNEEVAGVKARKLADAIAAQRFTSDGKTYSVSASYGIYTFKPGEDPATALARADEAMYASKHQR 237
            MKI D K ++ V+  A   A    +GQT     A D+ASVMGIP++EFTP+VRDAIM LMQEVDRFRQ+LE AK+RI+HLE+LAE+D LTPVLNRRGFVREMTRIKSF DRYN PA LVFFDL+NFKPVND FGHAAGDAVL +V QVLV++TRDSD+VGRLGGDEFGVILVN   E A  KA KL   IAAQ+F S    Y+V+AS+GI+  +PG+DPATALARADEAMYASK ++
Sbjct:    1 MKIQDSKPVSAVQ--AVKRAPPPPAGQTALVENAGDSASVMGIPESEFTPRVRDAIMTLMQEVDRFRQELERAKQRIDHLEKLAEYDPLTPVLNRRGFVREMTRIKSFVDRYNTPAALVFFDLDNFKPVNDRFGHAAGDAVLLRVTQVLVEHTRDSDVVGRLGGDEFGVILVNTGAETAMAKAEKLGATIAAQQFHSGAAVYNVTASFGIHVLQPGDDPATALARADEAMYASKRRK 235          
BLAST of mRNA_P-wetherbeei_contig5311.4.1 vs. uniprot
Match: A0A352KAI6_9PROT (GGDEF domain-containing protein n=4 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A352KAI6_9PROT)

HSP 1 Score: 253 bits (647), Expect = 9.310e-82
Identity = 130/217 (59.91%), Postives = 167/217 (76.96%), Query Frame = 0
Query:   21 GKVRSGQTRDA---RAAIDTASVMGIPQAEFTPKVRDAIMNLMQEVDRFRQDLEGAKRRIEHLERLAEHDVLTPVLNRRGFVREMTRIKSFADRYNAPATLVFFDLNNFKPVNDTFGHAAGDAVLQQVAQVLVDNTRDSDIVGRLGGDEFGVILVNNNEEVAGVKARKLADAIAAQRFTSDGKTYSVSASYGIYTFKPGEDPATALARADEAMYASK 234
            G  R+ QT  A   R   D  ++MGIP+ E TPKVRDAIM LMQE+DRFRQ+L+ AK+RI HLE +A+ D LT +LNRRGFV  M R+KS+ADRY+ PA+LV+FDLN FKPVND +GHAAGD VL+++A++L  NTRDSD+VGRLGGDEFGVILVN++   A  KA++LA+AI+A+ +  DGKT  V A+YG+YTF  GE     LA+AD+ M+A+K
Sbjct:   18 GSSRAQQTDGATQGRVISDNTTIMGIPETELTPKVRDAIMALMQELDRFRQELDVAKKRIAHLETIADQDTLTGILNRRGFVGAMNRVKSYADRYDTPASLVYFDLNKFKPVNDLYGHAAGDEVLRRIAEILSQNTRDSDVVGRLGGDEFGVILVNSDLPTAEAKAKQLAEAISAESYNFDGKTEHVHAAYGVYTFIKGEGLDETLAKADKKMFAAK 234          
BLAST of mRNA_P-wetherbeei_contig5311.4.1 vs. uniprot
Match: A0A845QDK9_9HYPH (Diguanylate cyclase n=2 Tax=Pyruvatibacter mobilis TaxID=1712261 RepID=A0A845QDK9_9HYPH)

HSP 1 Score: 233 bits (595), Expect = 9.210e-74
Identity = 134/242 (55.37%), Postives = 165/242 (68.18%), Query Frame = 0
Query:    1 MKITDPKALNTVRS--AAAPAA---GKVRSGQTRDARAAIDTASVMGIPQAEFTPKVRDAIMNLMQEVDRFRQDLEGAKRRIEHLERLAEHDVLTPVLNRRGFVREMTRIKSFADRYNAPATLVFFDLNNFKPVNDTFGHAAGDAVLQQVAQVLVDNTRDSDIVGRLGGDEFGVILVNNNEEVAGVKARKLADAIAAQRFTSDGKTYSVSASYGIYTFKPGEDPATALARADEAMYASKHQR 237
            MK+  P+   TV S  AA+PAA       +G     R   DTAS+MG+P+AE TPKVRDA+M LM EVD  R++L   K R+E +++ A+ D L PVLNRR FVREM+R+ SF++RY  PA++VF DLNNFK VNDT+GHAAGDAVL+ VA  LV++ R+SDIVGR+GGDEF VIL   NEE A  KA +L   IA        K   VS S G   F+PGED ATALARADEAMY +K +R
Sbjct:    1 MKVQGPRRPGTVSSVRAASPAARASAAGAAGSVTGTRQIADTASIMGVPEAELTPKVRDALMTLMSEVDALRRELTTMKGRLEAVQQEADTDSLVPVLNRRAFVREMSRMISFSERYKTPASVVFIDLNNFKQVNDTYGHAAGDAVLEYVASTLVEHVRESDIVGRIGGDEFAVILAQANEEDAREKAERLMHLIADTPLEIMDKKIPVSVSPGAVAFEPGEDAATALARADEAMYQAKRRR 242          
BLAST of mRNA_P-wetherbeei_contig5311.4.1 vs. uniprot
Match: X5MC95_9HYPH (GGDEF family protein n=2 Tax=Candidatus Phaeomarinobacter ectocarpi TaxID=1458461 RepID=X5MC95_9HYPH)

HSP 1 Score: 224 bits (571), Expect = 2.530e-70
Identity = 121/202 (59.90%), Postives = 147/202 (72.77%), Query Frame = 0
Query:   36 DTASVMGIPQAEFTPKVRDAIMNLMQEVDRFRQDLEGAKRRIEHLERLAEHDVLTPVLNRRGFVREMTRIKSFADRYNAPATLVFFDLNNFKPVNDTFGHAAGDAVLQQVAQVLVDNTRDSDIVGRLGGDEFGVILVNNNEEVAGVKARKLADAIAAQRFTSDGKTYSVSASYGIYTFKPGEDPATALARADEAMYASKHQR 237
            DTAS+MGIP+AE TPKVRDA+M LM EVD  R++L   + R++ +++ A+ D L PVLNRR FVRE++R+ SF++RY APA+LVF DLNNFK VNDT+GHAAGDAVL+ VA  LV++ R+SDIVGR+GGDEF VIL   NE  A  KA  L   IA       G    VS S G   FKPGED ATALARADEAMY +K +R
Sbjct:   27 DTASIMGIPEAEVTPKVRDALMTLMSEVDALRKELTTMRGRLDAVQQEADTDSLVPVLNRRAFVRELSRMISFSERYGAPASLVFIDLNNFKTVNDTYGHAAGDAVLEYVAGALVEHVRESDIVGRIGGDEFAVILAQANEADAMEKAESLMHLIADTPLEIMGHKIGVSVSPGAVAFKPGEDAATALARADEAMYVAKRRR 228          
BLAST of mRNA_P-wetherbeei_contig5311.4.1 vs. uniprot
Match: A0A6N7F867_9PROT (Diguanylate cyclase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7F867_9PROT)

HSP 1 Score: 222 bits (565), Expect = 2.570e-69
Identity = 115/236 (48.73%), Postives = 159/236 (67.37%), Query Frame = 0
Query:    1 MKITDPKALNTVRSAAAPAAGKVRSGQTRDARAAIDTASVMGIPQAEFTPKVRDAIMNLMQEVDRFRQDLEGAKRRIEHLERLAEHDVLTPVLNRRGFVREMTRIKSFADRYNAPATLVFFDLNNFKPVNDTFGHAAGDAVLQQVAQVLVDNTRDSDIVGRLGGDEFGVILVNNNEEVAGVKARKLADAIAAQRFTSDGKTYSVSASYGIYTFKPGEDPATALARADEAMYASKHQ 236
            MKI+D ++       AA  +            A  D+AS++GIP  E TPKVRDA+M LMQEVD  R++LE +++RI +LE+LA+ D L PV NRR FVRE++R  +F++RYN+P+++++FD+N  KP+NDT+GH AGDA L Q+A  LV+N R+SDIVGRLGGDEF VIL + +EE A  KA  L+  I ++    +G    +  S+G+YTF+ G+    ALA AD AMYA K Q
Sbjct:    1 MKISDTRSTTPASRYAAAYSRTAAVSAPAPLAAPADSASILGIPAGELTPKVRDALMRLMQEVDSLRRELEQSRQRIAYLEQLADQDSLAPVANRRAFVRELSRTIAFSERYNSPSSVIYFDVNGLKPINDTYGHPAGDAALMQIADALVENVRESDIVGRLGGDEFAVILSHGDEEAAREKAESLSATIESRPLDWNGAAIPLRVSWGVYTFRGGDSAGEALAAADRAMYAHKQQ 236          
BLAST of mRNA_P-wetherbeei_contig5311.4.1 vs. uniprot
Match: A0A7Y8SY72_9PROT (GGDEF domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7Y8SY72_9PROT)

HSP 1 Score: 219 bits (558), Expect = 1.950e-68
Identity = 116/207 (56.04%), Postives = 149/207 (71.98%), Query Frame = 0
Query:   32 RAAIDTASVMGIPQAEFTPKVRDAIMNLMQEVDRFRQDLEGAKRRIEHLERLAEHDVLTPVLNRRGFVREMTRIKSFADRYNAPATLVFFDLNNFKPVNDTFGHAAGDAVLQQVAQVLVDNTRDSDIVGRLGGDEFGVILVNNNEEVAGVKARKLADAIAAQRFTSDGKTYSVSASYGIYTFKPGEDPATALARADEAMYASKHQRA 238
            R A DT++V+GIP++EFTP+VRDAIM LM EVD  RQ+L   ++R+E LE  A+ D L P+ NRR FVREM+RI SFA+RY  PA+L++FDL+ FK +ND  GHAAGDAVL+ VA++L +N R+SDIVGRLGGDEFGVIL   +E  A  KA  LAD I +     DGK  S+S ++G  T KPG++   A+ RAD AMY  K + A
Sbjct:   20 RPAADTSAVLGIPESEFTPRVRDAIMKLMTEVDALRQELGRTRKRLEELETEADQDPLLPIFNRRAFVREMSRIMSFAERYGMPASLLYFDLDEFKGINDAHGHAAGDAVLKHVARLLSENIRESDIVGRLGGDEFGVILAKADEAAAMQKADVLADLIRSAPAEWDGKRLSISCTHGASTLKPGDNADHAMERADRAMYERKRRSA 226          
BLAST of mRNA_P-wetherbeei_contig5311.4.1 vs. uniprot
Match: A0A3M1JSS2_9PROT (GGDEF domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M1JSS2_9PROT)

HSP 1 Score: 219 bits (557), Expect = 5.540e-68
Identity = 115/235 (48.94%), Postives = 156/235 (66.38%), Query Frame = 0
Query:    1 MKITDPKALNTVRSAAAPAA-GKVRSGQTRDARAAIDTASVMGIPQAEFTPKVRDAIMNLMQEVDRFRQDLEGAKRRIEHLERLAEHDVLTPVLNRRGFVREMTRIKSFADRYNAPATLVFFDLNNFKPVNDTFGHAAGDAVLQQVAQVLVDNTRDSDIVGRLGGDEFGVILVNNNEEVAGVKARKLADAIAAQRFTSDGKTYSVSASYGIYTFKPGEDPATALARADEAMYASK 234
            MKI   + +N VR      A G  R+ +    R   D+AS+MGIP  E TPKVR AIM LM+EVDR R++L+ A++RI+ LE+LA+ D L P+ NRR FVRE++R+ SFA+RY  P +L++FD+N+ K +ND  GH AGDA L+ VA +++ + R SD+  RLGGDEF V+L N  E+ A  KA  LADAI    F  +G+   +  ++G Y+F+PGED A ALA AD  MYA K
Sbjct:    1 MKINQSRPVNQVRGVQRYTADGTARTAEPGGVREVSDSASIMGIPAEEMTPKVRQAIMTLMEEVDRMRKELDRAQQRIQELEQLADRDSLVPMANRRAFVRELSRMISFAERYEVPTSLIYFDVNDLKKINDELGHLAGDAALKHVADIILSSIRQSDVAARLGGDEFAVVLPNAEEDAAHAKAVALADAIYNTPFRWEGREMHIKVAHGAYSFRPGEDAAKALAEADRKMYAHK 235          
BLAST of mRNA_P-wetherbeei_contig5311.4.1 vs. uniprot
Match: A0A1Y5SA38_9PROT (Response regulator PleD n=1 Tax=Oceanibacterium hippocampi TaxID=745714 RepID=A0A1Y5SA38_9PROT)

HSP 1 Score: 218 bits (556), Expect = 7.140e-68
Identity = 114/219 (52.05%), Postives = 153/219 (69.86%), Query Frame = 0
Query:   25 SGQTRDARAAIDTASVMGIPQAEFTPKVRDAIMNLMQEVDRFRQDLEGAKRRIEHLERLAEHDVLTPVLNRRGFVREMTRIKSFADRYN--APATLVFFDLNNFKPVNDTFGHAAGDAVLQQVAQVLVDNTRDSDIVGRLGGDEFGVILVNNNEEVAGVKARKLADAIAAQRFTSDGKTYSVSASYGIYTFKPGEDPATALARADEAMYASKHQRAARK 241
            +G    +R   D  +++GIP+ E TPKVRDAIM LM+EVD  R +L+ + +R+  +E+LA+ D L  + NRR FVRE+TR+ +FADRY     A+LV+FD+NNFK +NDT+GHA GD VL+ VA  +VDN R SD+VGRLGGDEFGVILV      A  KA  L D++   ++  DG    +  S+G+YTF+PG++PA ALA ADEAMYA  H+ +ARK
Sbjct:   30 AGAAAPSRDINDVTTILGIPENELTPKVRDAIMTLMREVDTLRSELDRSNKRLGEMEKLADLDSLAAIYNRRAFVRELTRLIAFADRYGEAGTASLVYFDVNNFKAINDTYGHAVGDEVLKSVAGTIVDNVRRSDVVGRLGGDEFGVILVQAEGARAQEKATFLVDSVRQNKYLHDGTEIEIELSFGVYTFRPGDEPAAALAAADEAMYA--HKASARK 246          
BLAST of mRNA_P-wetherbeei_contig5311.4.1 vs. uniprot
Match: A0A2S6R7E7_9PROT (Diguanylate cyclase DosC n=1 Tax=Alphaproteobacteria bacterium MarineAlpha10_Bin2 TaxID=2013104 RepID=A0A2S6R7E7_9PROT)

HSP 1 Score: 217 bits (553), Expect = 1.910e-67
Identity = 112/199 (56.28%), Postives = 145/199 (72.86%), Query Frame = 0
Query:   36 DTASVMGIPQAEFTPKVRDAIMNLMQEVDRFRQDLEGAKRRIEHLERLAEHDVLTPVLNRRGFVREMTRIKSFADRYNAPATLVFFDLNNFKPVNDTFGHAAGDAVLQQVAQVLVDNTRDSDIVGRLGGDEFGVILVNNNEEVAGVKARKLADAIAAQRFTSDGKTYSVSASYGIYTFKPGEDPATALARADEAMYASK 234
            D+ASVMGIP+AE TPK+R AIM LM+EV R R++L G++ RIEHLERLA+ D L PV NRR F+RE+TR  S  +RY AP+T+++FD+NN K +ND+ GH AGDA L+ VA+ L++  RDSDIVGRLGGDEFGVIL   + +VA  K+ +LA  IA      +    ++S ++G YTF   ED   ALA AD+AMYASK
Sbjct:   37 DSASVMGIPEAELTPKIRMAIMTLMEEVARLREELNGSRGRIEHLERLADQDSLVPVYNRRAFLRELTRAISMTERYGAPSTVIYFDVNNMKQINDSHGHPAGDAALRHVAETLIEQVRDSDIVGRLGGDEFGVILYQIDADVAQDKSIQLAQEIAKNPVPFNDHELAISVTFGAYTFNGVEDAGQALAEADKAMYASK 235          
BLAST of mRNA_P-wetherbeei_contig5311.4.1 vs. uniprot
Match: A0A2E6GPI4_9PROT (GGDEF domain-containing protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6GPI4_9PROT)

HSP 1 Score: 217 bits (553), Expect = 1.910e-67
Identity = 109/207 (52.66%), Postives = 149/207 (71.98%), Query Frame = 0
Query:   28 TRDARAAIDTASVMGIPQAEFTPKVRDAIMNLMQEVDRFRQDLEGAKRRIEHLERLAEHDVLTPVLNRRGFVREMTRIKSFADRYNAPATLVFFDLNNFKPVNDTFGHAAGDAVLQQVAQVLVDNTRDSDIVGRLGGDEFGVILVNNNEEVAGVKARKLADAIAAQRFTSDGKTYSVSASYGIYTFKPGEDPATALARADEAMYASK 234
            T  AR+  DT +V+GIP AE TPKV+ AI  LM+EV+  R++LE +++RI +LE+LA+ D L PV NRR FVRE++RI +FA+RY++P++LV+FD+N  KP+NDT GH AGDA L ++A +LV+N R+SD+VGRLGGDEF VIL   +E+ A  KA+ L + + AQ    +G    +  SYGIYTF  G+    ALA AD AMY +K
Sbjct:   27 TPSARSISDTTNVLGIPDAELTPKVQGAIQRLMEEVESLRRELEQSRQRIAYLEQLADQDALAPVANRRAFVRELSRIMAFAERYDSPSSLVYFDVNGLKPINDTHGHPAGDAALMRIADILVENVRESDVVGRLGGDEFAVILSQADEKTAAEKAKILVERVQAQPLDWNGSEIPLMVSYGIYTFNGGDTAGEALAAADRAMYENK 233          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5311.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0TSX7_9PROT1.730e-10269.20GGDEF domain-containing protein n=1 Tax=Alphaprote... [more]
A0A352KAI6_9PROT9.310e-8259.91GGDEF domain-containing protein n=4 Tax=Alphaprote... [more]
A0A845QDK9_9HYPH9.210e-7455.37Diguanylate cyclase n=2 Tax=Pyruvatibacter mobilis... [more]
X5MC95_9HYPH2.530e-7059.90GGDEF family protein n=2 Tax=Candidatus Phaeomarin... [more]
A0A6N7F867_9PROT2.570e-6948.73Diguanylate cyclase n=1 Tax=Alphaproteobacteria ba... [more]
A0A7Y8SY72_9PROT1.950e-6856.04GGDEF domain-containing protein n=1 Tax=Alphaprote... [more]
A0A3M1JSS2_9PROT5.540e-6848.94GGDEF domain-containing protein n=1 Tax=Alphaprote... [more]
A0A1Y5SA38_9PROT7.140e-6852.05Response regulator PleD n=1 Tax=Oceanibacterium hi... [more]
A0A2S6R7E7_9PROT1.910e-6756.28Diguanylate cyclase DosC n=1 Tax=Alphaproteobacter... [more]
A0A2E6GPI4_9PROT1.910e-6752.66GGDEF domain-containing protein n=1 Tax=Rhodospiri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 56..83
NoneNo IPR availablePANTHERPTHR45138REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEMcoord: 59..236
IPR000160GGDEF domainSMARTSM00267duf1_3coord: 73..240
e-value: 7.7E-48
score: 174.9
IPR000160GGDEF domainTIGRFAMTIGR00254TIGR00254coord: 80..237
e-value: 1.6E-40
score: 136.5
IPR000160GGDEF domainPFAMPF00990GGDEFcoord: 84..238
e-value: 3.0E-39
score: 134.3
IPR000160GGDEF domainPROSITEPS50887GGDEFcoord: 114..242
score: 26.078499
IPR000160GGDEF domainCDDcd01949GGDEFcoord: 86..237
e-value: 7.4274E-55
score: 171.586
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 77..241
e-value: 1.2E-50
score: 173.6
IPR029787Nucleotide cyclaseSUPERFAMILY55073Nucleotide cyclasecoord: 89..237

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5311contigP-wetherbeei_contig5311:2467..3195 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5311.4.1mRNA_P-wetherbeei_contig5311.4.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig5311 2467..3195 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig5311.4.1 ID=prot_P-wetherbeei_contig5311.4.1|Name=mRNA_P-wetherbeei_contig5311.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=243bp
MKITDPKALNTVRSAAAPAAGKVRSGQTRDARAAIDTASVMGIPQAEFTP
KVRDAIMNLMQEVDRFRQDLEGAKRRIEHLERLAEHDVLTPVLNRRGFVR
EMTRIKSFADRYNAPATLVFFDLNNFKPVNDTFGHAAGDAVLQQVAQVLV
DNTRDSDIVGRLGGDEFGVILVNNNEEVAGVKARKLADAIAAQRFTSDGK
TYSVSASYGIYTFKPGEDPATALARADEAMYASKHQRAARKD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000160GGDEF_dom
IPR043128Rev_trsase/Diguanyl_cyclase
IPR029787Nucleotide_cyclase