prot_P-wetherbeei_contig53106.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig53106.1.1
Unique Nameprot_P-wetherbeei_contig53106.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length180
Homology
BLAST of mRNA_P-wetherbeei_contig53106.1.1 vs. uniprot
Match: A0A6L6AIS9_9ACTN (Geranylgeranyl reductase family protein n=5 Tax=root TaxID=1 RepID=A0A6L6AIS9_9ACTN)

HSP 1 Score: 350 bits (898), Expect = 1.160e-118
Identity = 176/180 (97.78%), Postives = 178/180 (98.89%), Query Frame = 0
Query:    1 VDGWAPLRDLELSRGDVRVSGPMRREAYVVPRRVLDARLVEKAVAAGAVLRRHRVTSVTAEPGRALVSERFAAPVVVGADGAHSLVRTALLGRRRDQRALAIRGYAPTPPHLVGRQVIRYGERTQPSYAWAFDRGDGLANVGYGELLPRGRGDGSPPSRRLLLEQLEELLPGMASTGTDW 180
            VDGWAPLRDLELSRGDVRV+GPMRREAYVVPRRVLDARLVEKAVAAGAVLRRHRVTSVT EPGRALVSERFAAPVVVGADGAHSLVRTALLGRRRDQRALAIRGYAPTPPHL GRQVIRYGERTQPSYAWAFDRGDGLANVGYGELLPRGRG+GSPPSRRLLLEQLEELLPGMASTGTDW
Sbjct:   71 VDGWAPLRDLELSRGDVRVAGPMRREAYVVPRRVLDARLVEKAVAAGAVLRRHRVTSVTTEPGRALVSERFAAPVVVGADGAHSLVRTALLGRRRDQRALAIRGYAPTPPHLAGRQVIRYGERTQPSYAWAFDRGDGLANVGYGELLPRGRGEGSPPSRRLLLEQLEELLPGMASTGTDW 250          
BLAST of mRNA_P-wetherbeei_contig53106.1.1 vs. uniprot
Match: UPI001B3173B4 (geranylgeranyl reductase family protein n=2 Tax=unclassified Nocardioides TaxID=2615069 RepID=UPI001B3173B4)

HSP 1 Score: 272 bits (696), Expect = 7.440e-88
Identity = 143/181 (79.01%), Postives = 152/181 (83.98%), Query Frame = 0
Query:    1 VDGWAPLRDLELSRGDVRVSGPMRREAYVVPRRVLDARLVEKAVAAGAVLRRHRVTSVTAEPGRALVSERFAAPVVVGADGAHSLVRTALLGRRRDQRALAIRGYAPTPPHLVGRQVIRYGERTQPSYAWAFDRGDGLANVGYGELLPRGRGDGSP-PSRRLLLEQLEELLPGMASTGTDW 180
            VDGW PLRDLELSRGDV VSGPMRRE +VVPRRVLDARLVE AVAAGAVLRRHR +S++  PG  LVS    A VVVGADGAHSLVR+ LLG RR  RA+AIRGYAPTPP L GRQVIRYG R QPSYAWAFDRGDGLANVGYGELLP G G GSP PSRRLLL +LE L+PG A+TGTDW
Sbjct:   76 VDGWRPLRDLELSRGDVTVSGPMRREVHVVPRRVLDARLVEHAVAAGAVLRRHRASSLSTGPGAPLVSGEIGAEVVVGADGAHSLVRSVLLGGRRQPRAIAIRGYAPTPPELAGRQVIRYGHRGQPSYAWAFDRGDGLANVGYGELLPGG-GAGSPAPSRRLLLGELERLVPGAAATGTDW 255          
BLAST of mRNA_P-wetherbeei_contig53106.1.1 vs. uniprot
Match: A0A0Q6V5I7_9ACTN (Hyaluronate lyase n=2 Tax=root TaxID=1 RepID=A0A0Q6V5I7_9ACTN)

HSP 1 Score: 271 bits (692), Expect = 1.810e-87
Identity = 136/180 (75.56%), Postives = 153/180 (85.00%), Query Frame = 0
Query:    1 VDGWAPLRDLELSRGDVRVSGPMRREAYVVPRRVLDARLVEKAVAAGAVLRRHRVTSVTAEPGRALVSERFAAPVVVGADGAHSLVRTALLGRRRDQRALAIRGYAPTPPHLVGRQVIRYGERTQPSYAWAFDRGDGLANVGYGELLPRGRGDGSPPSRRLLLEQLEELLPGMASTGTDW 180
            VD W PLR L LS  DV V+GPMRRE +VVPR+V DARLVE+AVAAGAVLRRHRV+S+ A     +VS+  AA VVVGADGAHSLVR +LLGRRR+ RA+AIRGYAPTPP + GRQVIRYG+R QPSYAWAFDRGDGLANVGYGELLP  RG GSPPSR+LLL+QLEEL+PG ASTG+DW
Sbjct:   68 VDDWTPLRHLSLSHSDVEVAGPMRREVHVVPRQVFDARLVERAVAAGAVLRRHRVSSLGAGADGPVVSDELAARVVVGADGAHSLVRESLLGRRREPRAIAIRGYAPTPPEIAGRQVIRYGDRRQPSYAWAFDRGDGLANVGYGELLPGERGTGSPPSRQLLLDQLEELIPGAASTGSDW 247          
BLAST of mRNA_P-wetherbeei_contig53106.1.1 vs. uniprot
Match: A0A7Y9H5U2_9ACTN (Geranylgeranyl reductase family protein n=2 Tax=Nocardioides cavernae TaxID=1921566 RepID=A0A7Y9H5U2_9ACTN)

HSP 1 Score: 268 bits (684), Expect = 3.020e-86
Identity = 138/180 (76.67%), Postives = 150/180 (83.33%), Query Frame = 0
Query:    1 VDGWAPLRDLELSRGDVRVSGPMRREAYVVPRRVLDARLVEKAVAAGAVLRRHRVTSVTAEPGRALVSERFAAPVVVGADGAHSLVRTALLGRRRDQRALAIRGYAPTPPHLVGRQVIRYGERTQPSYAWAFDRGDGLANVGYGELLPRGRGDGSPPSRRLLLEQLEELLPGMASTGTDW 180
            V GW PLRDLELSR DV VSGPMRR+ +VVPRRVLDARLVE+AVAAGA LR HRVTS+ A P   LVS+     VVVGADGAHSLVRTALLG+RR+ RA+AIRGYAPT P + GRQVIRYGER QPSYAWAFDRGDGLANVGYGELLP  +  G  PSRRLLL+QLE L+PG ASTGTDW
Sbjct:   75 VAGWTPLRDLELSRRDVVVSGPMRRDVHVVPRRVLDARLVERAVAAGAELRTHRVTSLAAGPDGVLVSDGVRGRVVVGADGAHSLVRTALLGKRREARAIAIRGYAPTTPEMAGRQVIRYGERRQPSYAWAFDRGDGLANVGYGELLPGEQKPGQAPSRRLLLDQLERLVPGAASTGTDW 254          
BLAST of mRNA_P-wetherbeei_contig53106.1.1 vs. uniprot
Match: A0A0Q9QEH3_9ACTN (Hyaluronate lyase n=1 Tax=Nocardioides sp. Soil777 TaxID=1736409 RepID=A0A0Q9QEH3_9ACTN)

HSP 1 Score: 265 bits (676), Expect = 2.460e-85
Identity = 139/182 (76.37%), Postives = 151/182 (82.97%), Query Frame = 0
Query:    1 VDGWAPLRDLELSRGDVRVSGPMRREAYVVPRRVLDARLVEKAVAAGAVLRRHRVTSVT--AEPGRALVSERFAAPVVVGADGAHSLVRTALLGRRRDQRALAIRGYAPTPPHLVGRQVIRYGERTQPSYAWAFDRGDGLANVGYGELLPRGRGDGSPPSRRLLLEQLEELLPGMASTGTDW 180
            VD W PLRDLELS GDVRV+G M R AYVVPR VLDARLVE+AVAAGA LRRHRV+SVT  A+ G  LVS+  AA VVVGADGAHSLVRT LLG  RD+RA+AIRGYAPT P L GRQVIRYG+R QPSYAWAFDRGDGLANVGYGELLP  R     PSRRLLLEQLE L+PG+A++GTDW
Sbjct:   59 VDDWTPLRDLELSHGDVRVAGAMERPAYVVPRAVLDARLVERAVAAGATLRRHRVSSVTPAADGGPVLVSDELAAGVVVGADGAHSLVRTGLLGTTRDRRAIAIRGYAPTTPELRGRQVIRYGDRRQPSYAWAFDRGDGLANVGYGELLPTERDRREAPSRRLLLEQLEVLIPGVAASGTDW 240          
BLAST of mRNA_P-wetherbeei_contig53106.1.1 vs. uniprot
Match: A0A4Q2S412_9ACTN (Geranylgeranyl reductase family protein n=1 Tax=Nocardioides glacieisoli TaxID=1168730 RepID=A0A4Q2S412_9ACTN)

HSP 1 Score: 264 bits (675), Expect = 5.780e-85
Identity = 136/180 (75.56%), Postives = 151/180 (83.89%), Query Frame = 0
Query:    1 VDGWAPLRDLELSRGDVRVSGPMRREAYVVPRRVLDARLVEKAVAAGAVLRRHRVTSVTAEPGRALVSERFAAPVVVGADGAHSLVRTALLGRRRDQRALAIRGYAPTPPHLVGRQVIRYGERTQPSYAWAFDRGDGLANVGYGELLPRGRGDGSPPSRRLLLEQLEELLPGMASTGTDW 180
            VDGW PLRDLEL+ GDV V+GPMRR+A+VVPRRVLDARLVE AVAAGAVLRRHRVTSVT +    +VS    A VVVGADGAHSLVR ALLGRRRD+RA+AIRGYAP    + GRQVIR+G+RT  SYAWAFDRGDGLANVGYGELLP  R    PPSRRLLL+QLE+L+PG ASTG+DW
Sbjct:   68 VDGWTPLRDLELAHGDVAVAGPMRRDAWVVPRRVLDARLVEHAVAAGAVLRRHRVTSVTVDDTGPVVSGDLRAAVVVGADGAHSLVRQALLGRRRDRRAIAIRGYAPVTDAVRGRQVIRFGDRTHTSYAWAFDRGDGLANVGYGELLPTERSGTRPPSRRLLLDQLEQLVPGAASTGSDW 247          
BLAST of mRNA_P-wetherbeei_contig53106.1.1 vs. uniprot
Match: UPI001E30DDA7 (NAD(P)/FAD-dependent oxidoreductase n=1 Tax=Nocardioides okcheonensis TaxID=2894081 RepID=UPI001E30DDA7)

HSP 1 Score: 261 bits (668), Expect = 2.950e-84
Identity = 138/180 (76.67%), Postives = 147/180 (81.67%), Query Frame = 0
Query:    1 VDGWAPLRDLELSRGDVRVSGPMRREAYVVPRRVLDARLVEKAVAAGAVLRRHRVTSVTAEPGRALVSERFAAPVVVGADGAHSLVRTALLGRRRDQRALAIRGYAPTPPHLVGRQVIRYGERTQPSYAWAFDRGDGLANVGYGELLPRGRGDGSPPSRRLLLEQLEELLPGMASTGTDW 180
            V+GW PLR+L LSRGDV V+GPMRRE +VVPRRVLDARLVE+AVAAGAVLRRHR TS+      +LVS   A  VVVGADGAHSLVRTALLGR R  RA+AIRGYAP P    GRQVIRYGER QPSYAW FDRGDGLANVGYGELLP G GD  PPSRRLLLEQLE L+PG ASTG DW
Sbjct:   69 VEGWRPLRELVLSRGDVTVTGPMRREVHVVPRRVLDARLVERAVAAGAVLRRHRATSLHVGRDDSLVSGELAGRVVVGADGAHSLVRTALLGRSRSPRAIAIRGYAPVPAGTEGRQVIRYGERRQPSYAWCFDRGDGLANVGYGELLP-GEGDTDPPSRRLLLEQLELLVPGAASTGGDW 247          
BLAST of mRNA_P-wetherbeei_contig53106.1.1 vs. uniprot
Match: A0A4Q2SBU2_9ACTN (NAD(P)/FAD-dependent oxidoreductase n=2 Tax=Nocardioides TaxID=1839 RepID=A0A4Q2SBU2_9ACTN)

HSP 1 Score: 262 bits (669), Expect = 6.810e-84
Identity = 138/185 (74.59%), Postives = 149/185 (80.54%), Query Frame = 0
Query:    1 VDGWAPLRDLELSRGDVRVSGPMRREAYVVPRRVLDARLVEKAVAAGAVLRRHRVTSVT-----AEPGRALVSERFAAPVVVGADGAHSLVRTALLGRRRDQRALAIRGYAPTPPHLVGRQVIRYGERTQPSYAWAFDRGDGLANVGYGELLPRGRGDGSPPSRRLLLEQLEELLPGMASTGTDW 180
            V  W PLRDLELS GDV VSGPMRRE +VVPR VLDARLVE+AVAAGAVLR HRVTS+        PG  +VS + +A V+VGADGAHSLVRTALLGRRR+ RA+AIRGYAPT P + GRQVIRYG R QPSYAWAFDRGDGLANVGYGELLP  RG    PSRRLLLEQLEEL+PG A TG DW
Sbjct:   70 VADWTPLRDLELSHGDVTVSGPMRREVHVVPRAVLDARLVERAVAAGAVLRTHRVTSLANLHAPRPPGVPVVSGQVSADVLVGADGAHSLVRTALLGRRREPRAIAIRGYAPTTPEMAGRQVIRYGTRRQPSYAWAFDRGDGLANVGYGELLPGERGGAGTPSRRLLLEQLEELVPGAARTGGDW 254          
BLAST of mRNA_P-wetherbeei_contig53106.1.1 vs. uniprot
Match: UPI00174C6209 (geranylgeranyl reductase family protein n=1 Tax=Nocardioides flavus Wang et al. 2016 TaxID=2058780 RepID=UPI00174C6209)

HSP 1 Score: 261 bits (668), Expect = 1.150e-83
Identity = 139/185 (75.14%), Postives = 149/185 (80.54%), Query Frame = 0
Query:    1 VDGWAPLRDLELSRGDVRVSGPMRREAYVVPRRVLDARLVEKAVAAGAVLRRHRVTSVT-----AEPGRALVSERFAAPVVVGADGAHSLVRTALLGRRRDQRALAIRGYAPTPPHLVGRQVIRYGERTQPSYAWAFDRGDGLANVGYGELLPRGRGDGSPPSRRLLLEQLEELLPGMASTGTDW 180
            VDGWAPLRDLELS GDV VSGPMRRE +VVPR VLDARLV++AVAAGAVLR HRVTS+        PG  +VS   +A V+VGADGAHSLVRTALLG RR  RA+AIRGYAPT P L GRQVIRYG R QPSYAWAFDRGDGLANVGYGELLP  R     PSRRLLL+QLEEL+PG ASTG DW
Sbjct:   70 VDGWAPLRDLELSHGDVTVSGPMRREVHVVPRAVLDARLVQRAVAAGAVLRTHRVTSLANLHAPRVPGLPVVSGSVSASVLVGADGAHSLVRTALLGPRRQTRAIAIRGYAPTTPELAGRQVIRYGTRRQPSYAWAFDRGDGLANVGYGELLPGERDGTGTPSRRLLLKQLEELVPGAASTGGDW 254          
BLAST of mRNA_P-wetherbeei_contig53106.1.1 vs. uniprot
Match: UPI0017462126 (NAD(P)/FAD-dependent oxidoreductase n=1 Tax=Nocardioides cavernae TaxID=1921566 RepID=UPI0017462126)

HSP 1 Score: 261 bits (667), Expect = 1.290e-83
Identity = 136/180 (75.56%), Postives = 150/180 (83.33%), Query Frame = 0
Query:    1 VDGWAPLRDLELSRGDVRVSGPMRREAYVVPRRVLDARLVEKAVAAGAVLRRHRVTSVTAEPGRALVSERFAAPVVVGADGAHSLVRTALLGRRRDQRALAIRGYAPTPPHLVGRQVIRYGERTQPSYAWAFDRGDGLANVGYGELLPRGRGDGSPPSRRLLLEQLEELLPGMASTGTDW 180
            VDGWAPLRDLEL+ GDV V+GPMRRE +VVPRRVLDARLVE+AVAAGAVLR HR TS+T      +VS   +A VVVGADGAHS VRTALLG+RR+ RA+AIRGYAPT P + GRQVIRYG+R QPSYAWAFDRGDGLANVGYGELLP G   G  PSRRLLL+QLE L+PG ASTG DW
Sbjct:   72 VDGWAPLRDLELAHGDVSVAGPMRREVHVVPRRVLDARLVERAVAAGAVLRTHRATSLT-RTDTPVVSGEVSADVVVGADGAHSFVRTALLGKRREPRAIAIRGYAPTTPEMAGRQVIRYGDRRQPSYAWAFDRGDGLANVGYGELLP-GERHGGAPSRRLLLDQLELLVPGAASTGDDW 249          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig53106.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6L6AIS9_9ACTN1.160e-11897.78Geranylgeranyl reductase family protein n=5 Tax=ro... [more]
UPI001B3173B47.440e-8879.01geranylgeranyl reductase family protein n=2 Tax=un... [more]
A0A0Q6V5I7_9ACTN1.810e-8775.56Hyaluronate lyase n=2 Tax=root TaxID=1 RepID=A0A0Q... [more]
A0A7Y9H5U2_9ACTN3.020e-8676.67Geranylgeranyl reductase family protein n=2 Tax=No... [more]
A0A0Q9QEH3_9ACTN2.460e-8576.37Hyaluronate lyase n=1 Tax=Nocardioides sp. Soil777... [more]
A0A4Q2S412_9ACTN5.780e-8575.56Geranylgeranyl reductase family protein n=1 Tax=No... [more]
UPI001E30DDA72.950e-8476.67NAD(P)/FAD-dependent oxidoreductase n=1 Tax=Nocard... [more]
A0A4Q2SBU2_9ACTN6.810e-8474.59NAD(P)/FAD-dependent oxidoreductase n=2 Tax=Nocard... [more]
UPI00174C62091.150e-8375.14geranylgeranyl reductase family protein n=1 Tax=No... [more]
UPI00174621261.290e-8375.56NAD(P)/FAD-dependent oxidoreductase n=1 Tax=Nocard... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036188FAD/NAD(P)-binding domain superfamilyGENE3D3.50.50.60coord: 4..178
e-value: 8.3E-21
score: 76.6
IPR036188FAD/NAD(P)-binding domain superfamilySUPERFAMILY51905FAD/NAD(P)-binding domaincoord: 19..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig53106contigP-wetherbeei_contig53106:1..540 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig53106.1.1mRNA_P-wetherbeei_contig53106.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig53106 1..540 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig53106.1.1 ID=prot_P-wetherbeei_contig53106.1.1|Name=mRNA_P-wetherbeei_contig53106.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=180bp
VDGWAPLRDLELSRGDVRVSGPMRREAYVVPRRVLDARLVEKAVAAGAVL
RRHRVTSVTAEPGRALVSERFAAPVVVGADGAHSLVRTALLGRRRDQRAL
AIRGYAPTPPHLVGRQVIRYGERTQPSYAWAFDRGDGLANVGYGELLPRG
RGDGSPPSRRLLLEQLEELLPGMASTGTDW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036188FAD/NAD-bd_sf