prot_P-wetherbeei_contig53005.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig53005.2.1
Unique Nameprot_P-wetherbeei_contig53005.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length37
Homology
BLAST of mRNA_P-wetherbeei_contig53005.2.1 vs. uniprot
Match: B9TB85_RICCO (HHH_8 domain-containing protein (Fragment) n=1 Tax=Ricinus communis TaxID=3988 RepID=B9TB85_RICCO)

HSP 1 Score: 60.5 bits (145), Expect = 1.210e-10
Identity = 28/37 (75.68%), Postives = 33/37 (89.19%), Query Frame = 0
Query:    1 MPAHNADIADAFNEMADLLELRQDNRFRIRAYRNAAR 37
            MP HNADIA+ FNE+ADLLE++ DN FR+RAYRNAAR
Sbjct:   11 MPIHNADIAEIFNEIADLLEIQGDNPFRVRAYRNAAR 47          
BLAST of mRNA_P-wetherbeei_contig53005.2.1 vs. uniprot
Match: A0A1F4FFQ6_9PROT (DNA polymerase beta n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14 TaxID=1797501 RepID=A0A1F4FFQ6_9PROT)

HSP 1 Score: 60.8 bits (146), Expect = 8.870e-10
Identity = 29/37 (78.38%), Postives = 33/37 (89.19%), Query Frame = 0
Query:    1 MPAHNADIADAFNEMADLLELRQDNRFRIRAYRNAAR 37
            MP HNADIA AF+E+ADLLELR +N FR+RAYRNAAR
Sbjct:    1 MPVHNADIARAFDEIADLLELRDENPFRVRAYRNAAR 37          
BLAST of mRNA_P-wetherbeei_contig53005.2.1 vs. uniprot
Match: A0A521Z397_9PROT (DNA polymerase beta n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521Z397_9PROT)

HSP 1 Score: 60.8 bits (146), Expect = 8.870e-10
Identity = 29/37 (78.38%), Postives = 33/37 (89.19%), Query Frame = 0
Query:    1 MPAHNADIADAFNEMADLLELRQDNRFRIRAYRNAAR 37
            MP HNADIA AF+E+ADLLELR +N FR+RAYRNAAR
Sbjct:    1 MPVHNADIARAFDEIADLLELRDENPFRVRAYRNAAR 37          
BLAST of mRNA_P-wetherbeei_contig53005.2.1 vs. uniprot
Match: UPI0004734C94 (DNA polymerase/3'-5' exonuclease PolX n=1 Tax=Herminiimonas sp. CN TaxID=1349818 RepID=UPI0004734C94)

HSP 1 Score: 59.7 bits (143), Expect = 2.270e-9
Identity = 29/37 (78.38%), Postives = 32/37 (86.49%), Query Frame = 0
Query:    1 MPAHNADIADAFNEMADLLELRQDNRFRIRAYRNAAR 37
            MP HNADIA  F+E+ADLLE+R DN FRIRAYRNAAR
Sbjct:    1 MPLHNADIAAIFDEIADLLEIRDDNPFRIRAYRNAAR 37          
BLAST of mRNA_P-wetherbeei_contig53005.2.1 vs. uniprot
Match: A0A1J5QFI1_9ZZZZ (DNA polymerase beta n=1 Tax=mine drainage metagenome TaxID=410659 RepID=A0A1J5QFI1_9ZZZZ)

HSP 1 Score: 59.7 bits (143), Expect = 2.270e-9
Identity = 30/37 (81.08%), Postives = 31/37 (83.78%), Query Frame = 0
Query:    1 MPAHNADIADAFNEMADLLELRQDNRFRIRAYRNAAR 37
            MP HNADIA AF EMADLLE+ Q N FRIRAYRNAAR
Sbjct:    1 MPIHNADIAAAFTEMADLLEIEQANPFRIRAYRNAAR 37          
BLAST of mRNA_P-wetherbeei_contig53005.2.1 vs. uniprot
Match: A0A1F4DGH8_9PROT (DNA polymerase beta n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 TaxID=1797497 RepID=A0A1F4DGH8_9PROT)

HSP 1 Score: 58.9 bits (141), Expect = 4.230e-9
Identity = 29/37 (78.38%), Postives = 31/37 (83.78%), Query Frame = 0
Query:    1 MPAHNADIADAFNEMADLLELRQDNRFRIRAYRNAAR 37
            MP HNADIA  F E+ADLLE+R DN FRIRAYRNAAR
Sbjct:    1 MPIHNADIAAVFEEIADLLEIRGDNPFRIRAYRNAAR 37          
BLAST of mRNA_P-wetherbeei_contig53005.2.1 vs. uniprot
Match: A0A1F4DRC1_9PROT (DNA polymerase beta n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13 TaxID=1797495 RepID=A0A1F4DRC1_9PROT)

HSP 1 Score: 58.2 bits (139), Expect = 7.910e-9
Identity = 28/37 (75.68%), Postives = 31/37 (83.78%), Query Frame = 0
Query:    1 MPAHNADIADAFNEMADLLELRQDNRFRIRAYRNAAR 37
            MP HNADIA  F E+ADLLE+R +N FRIRAYRNAAR
Sbjct:    1 MPIHNADIAAVFEEIADLLEIRDENPFRIRAYRNAAR 37          
BLAST of mRNA_P-wetherbeei_contig53005.2.1 vs. uniprot
Match: A0A0A6Q9B3_9BURK (DNA-directed DNA polymerase n=1 Tax=Paraburkholderia sacchari TaxID=159450 RepID=A0A0A6Q9B3_9BURK)

HSP 1 Score: 57.8 bits (138), Expect = 1.080e-8
Identity = 26/37 (70.27%), Postives = 32/37 (86.49%), Query Frame = 0
Query:    1 MPAHNADIADAFNEMADLLELRQDNRFRIRAYRNAAR 37
            MP HNAD+A+ FNE+ADLLE++  N FR+RAYRNAAR
Sbjct:    1 MPIHNADVAEVFNEIADLLEIQGGNPFRVRAYRNAAR 37          
BLAST of mRNA_P-wetherbeei_contig53005.2.1 vs. uniprot
Match: A0A5C6V4Y0_9BURK (DNA-directed DNA polymerase n=2 Tax=Burkholderiaceae TaxID=119060 RepID=A0A5C6V4Y0_9BURK)

HSP 1 Score: 57.4 bits (137), Expect = 1.480e-8
Identity = 27/37 (72.97%), Postives = 31/37 (83.78%), Query Frame = 0
Query:    1 MPAHNADIADAFNEMADLLELRQDNRFRIRAYRNAAR 37
            MP HNADIAD FNE+ADLLE++  N FR+RAYR AAR
Sbjct:    1 MPIHNADIADVFNEIADLLEIQGGNPFRVRAYRRAAR 37          
BLAST of mRNA_P-wetherbeei_contig53005.2.1 vs. uniprot
Match: A0A1F4F3E5_9PROT (DNA polymerase beta n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_20 TaxID=1797505 RepID=A0A1F4F3E5_9PROT)

HSP 1 Score: 57.0 bits (136), Expect = 1.930e-8
Identity = 27/36 (75.00%), Postives = 30/36 (83.33%), Query Frame = 0
Query:    1 MPAHNADIADAFNEMADLLELRQDNRFRIRAYRNAA 36
            MP HNADIA  F E+ADLLELR +N FR+RAYRNAA
Sbjct:    1 MPVHNADIARIFEEIADLLELRDENPFRVRAYRNAA 36          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig53005.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
B9TB85_RICCO1.210e-1075.68HHH_8 domain-containing protein (Fragment) n=1 Tax... [more]
A0A1F4FFQ6_9PROT8.870e-1078.38DNA polymerase beta n=1 Tax=Betaproteobacteria bac... [more]
A0A521Z397_9PROT8.870e-1078.38DNA polymerase beta n=1 Tax=Betaproteobacteria bac... [more]
UPI0004734C942.270e-978.38DNA polymerase/3'-5' exonuclease PolX n=1 Tax=Herm... [more]
A0A1J5QFI1_9ZZZZ2.270e-981.08DNA polymerase beta n=1 Tax=mine drainage metageno... [more]
A0A1F4DGH8_9PROT4.230e-978.38DNA polymerase beta n=1 Tax=Betaproteobacteria bac... [more]
A0A1F4DRC1_9PROT7.910e-975.68DNA polymerase beta n=1 Tax=Betaproteobacteria bac... [more]
A0A0A6Q9B3_9BURK1.080e-870.27DNA-directed DNA polymerase n=1 Tax=Paraburkholder... [more]
A0A5C6V4Y0_9BURK1.480e-872.97DNA-directed DNA polymerase n=2 Tax=Burkholderiace... [more]
A0A1F4F3E5_9PROT1.930e-875.00DNA polymerase beta n=1 Tax=Betaproteobacteria bac... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010996DNA polymerase beta-like, N-terminal domainPFAMPF14716HHH_8coord: 5..37
e-value: 3.3E-12
score: 46.6
IPR027421DNA polymerase lambda lyase domain superfamilyGENE3D1.10.150.110coord: 2..37
e-value: 3.0E-12
score: 48.7
IPR027421DNA polymerase lambda lyase domain superfamilySUPERFAMILY47802DNA polymerase beta, N-terminal domain-likecoord: 2..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig53005contigP-wetherbeei_contig53005:430..540 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig53005.2.1mRNA_P-wetherbeei_contig53005.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig53005 406..540 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig53005.2.1 ID=prot_P-wetherbeei_contig53005.2.1|Name=mRNA_P-wetherbeei_contig53005.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=37bp
MPAHNADIADAFNEMADLLELRQDNRFRIRAYRNAAR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010996DNA_pol_b-like_N
IPR027421DNA_pol_lamdba_lyase_dom_sf