prot_P-wetherbeei_contig52986.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig52986.1.1
Unique Nameprot_P-wetherbeei_contig52986.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length176
Homology
BLAST of mRNA_P-wetherbeei_contig52986.1.1 vs. uniprot
Match: A0A7C4XND0_9HYPH (RNA polymerase subunit sigma-70 n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4XND0_9HYPH)

HSP 1 Score: 297 bits (760), Expect = 1.710e-97
Identity = 131/177 (74.01%), Postives = 150/177 (84.75%), Query Frame = 0
Query:    1 MEGYIGNILVIYDLKDPANPTEVSRWWMPGQHVAAGEIPTWKGYKNRLHHALRHKDELWAAVWNAGIRVLDIKDIRNPKVVGAYDYHPPFPEPTHTILKVPFPVAGRDIAIGADEEHDHTYGNLHAGLWVFDVEKRDEIKALSMFHVPERMSPFSQIG-RFGMHQFQEHLTDTRLFC 176
            MEG+IGNILVIYDLK+P  P EVSRWWMPGQHVA GE PTWKGY NRLHH +R  +ELWAAVWNAGIRV+D+ DI  P+ +G+Y+YHPPFPEPTHT+LKVPFPVAGRDIA+  DEEHDH  G LHAGLWVFDV KRD+I+ L MFH+ E  SP+++ G RFGMHQFQEHL DTRL+C
Sbjct:  182 MEGFIGNILVIYDLKNPNKPAEVSRWWMPGQHVAGGEKPTWKGYGNRLHHTMRCGNELWAAVWNAGIRVIDVSDITKPRTIGSYNYHPPFPEPTHTVLKVPFPVAGRDIAVACDEEHDHVPGQLHAGLWVFDVAKRDDIRPLGMFHLSELASPYTKSGHRFGMHQFQEHLEDTRLYC 358          
BLAST of mRNA_P-wetherbeei_contig52986.1.1 vs. uniprot
Match: A0A1F4A3R3_9PROT (RNA polymerase subunit sigma-70 n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4A3R3_9PROT)

HSP 1 Score: 278 bits (711), Expect = 5.190e-90
Identity = 124/175 (70.86%), Postives = 141/175 (80.57%), Query Frame = 0
Query:    1 MEGYIGNILVIYDLKDPANPTEVSRWWMPGQHVAAGEIPTWKGYKNRLHHALRHKDELWAAVWNAGIRVLDIKDIRNPKVVGAYDYHPPFPEPTHTILKVPFPVAGRDIAIGADEEHDHTYGNLHAGLWVFDVEKRDEIKALSMFHVPERMSPFSQIGRFGMHQFQEHLTDTRLF 175
            MEGY+GNILVIYDL  P  P EVSRWW+PGQHVA GE PTW+ YKNRLHHALR  DELWAAVWNAG+RV+D+ DIR P+ V  Y+YHPPFPEPTHT+L VPFPVAGR IA+  DEEHDH  G  HAGLWVFDV    +I+ LSMFHV E  SP+S+ GRFG HQFQEHL+DT ++
Sbjct:  189 MEGYVGNILVIYDLAKPDAPQEVSRWWLPGQHVAGGETPTWESYKNRLHHALRSGDELWAAVWNAGLRVIDVSDIRRPRTVAEYNYHPPFPEPTHTVLPVPFPVAGRRIAVAVDEEHDHIPGQPHAGLWVFDVSDLADIRPLSMFHVGEMDSPWSRTGRFGAHQFQEHLSDTLVY 363          
BLAST of mRNA_P-wetherbeei_contig52986.1.1 vs. uniprot
Match: A0A6I7P5N7_9PROT (RNA polymerase subunit sigma-70 n=1 Tax=Geminicoccaceae bacterium TaxID=2448052 RepID=A0A6I7P5N7_9PROT)

HSP 1 Score: 275 bits (702), Expect = 8.860e-89
Identity = 119/175 (68.00%), Postives = 138/175 (78.86%), Query Frame = 0
Query:    1 MEGYIGNILVIYDLKDPANPTEVSRWWMPGQHVAAGEIPTWKGYKNRLHHALRHKDELWAAVWNAGIRVLDIKDIRNPKVVGAYDYHPPFPEPTHTILKVPFPVAGRDIAIGADEEHDHTYGNLHAGLWVFDVEKRDEIKALSMFHVPERMSPFSQIGRFGMHQFQEHLTDTRLF 175
            MEGY+GNILVIYDL DP  P EVSRWWMPGQHVA GE PTW GY +RLHH LRH DEL+AAVW AG R++D+KDI  P  +GA+DYHPPFPEPTHT ++VPFPVAGR +A+  DEEH HT G LH GLWVFDV     I+ + M+H+ ER SPF + GRFG HQFQEH+ DTRL+
Sbjct:  181 MEGYVGNILVIYDLADPTRPQEVSRWWMPGQHVAGGETPTWSGYSHRLHHTLRHGDELYAAVWYAGCRIIDVKDITKPTTIGAFDYHPPFPEPTHTFMRVPFPVAGRTLAVAVDEEHAHTPGQLHGGLWVFDVADPANIQHVGMWHLSERASPFVEHGRFGAHQFQEHMKDTRLY 355          
BLAST of mRNA_P-wetherbeei_contig52986.1.1 vs. uniprot
Match: W9HA84_9PROT (Uncharacterized protein n=1 Tax=Skermanella stibiiresistens SB22 TaxID=1385369 RepID=W9HA84_9PROT)

HSP 1 Score: 269 bits (688), Expect = 1.410e-86
Identity = 119/177 (67.23%), Postives = 137/177 (77.40%), Query Frame = 0
Query:    1 MEGYIGNILVIYDLKDPANPTEVSRWWMPGQHVAAGEIPTWKGYKNRLHHALRHKDELWAAVWNAGIRVLDIKDIRNPKVVGAYDYHPPFPEPTHTILKVPFPVAGRDIAIGADEEHDHTYGNLHAGLWVFDVEKRDEIKALSMFHVPERMSPFSQIG-RFGMHQFQEHLTDTRLFC 176
            M+GY+GNILV+YD+ DPA PTEVSRWWMPGQHVA GE P W G +NRLHHALR  DELWA+VW AG+RV+DI D+  P+ +GAYDYHPPFPEPTHTI  VP    GR IA+  DEEHDHT G LH GLW FDVE R +IK + MFH+ E  SPFS+IG RFG HQFQE +T   L+C
Sbjct:  187 MDGYVGNILVVYDIADPAQPTEVSRWWMPGQHVAGGETPFWSGQRNRLHHALRFGDELWASVWYAGLRVIDISDVTKPRTIGAYDYHPPFPEPTHTIAPVPVKWKGRQIAVAVDEEHDHTPGQLHGGLWFFDVEDRTDIKPIGMFHLSELDSPFSRIGARFGAHQFQERVTGDTLYC 363          
BLAST of mRNA_P-wetherbeei_contig52986.1.1 vs. uniprot
Match: A0A1F4DGU0_9PROT (RNA polymerase subunit sigma-70 n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13 TaxID=1797498 RepID=A0A1F4DGU0_9PROT)

HSP 1 Score: 269 bits (687), Expect = 2.170e-86
Identity = 121/175 (69.14%), Postives = 140/175 (80.00%), Query Frame = 0
Query:    1 MEGYIGNILVIYDLKDPANPTEVSRWWMPGQHVAAGEIPTWKGYKNRLHHALRHKDELWAAVWNAGIRVLDIKDIRNPKVVGAYDYHPPFPEPTHTILKVPFPVAGRDIAIGADEEHDHTYGNLHAGLWVFDVEKRDEIKALSMFHVPERMSPFSQIGRFGMHQFQEHLTDTRLF 175
            MEGY+GNILVIYDL  P  P EVSRWW+PGQHVA GE+PTW+ YKNRLHHALR  DELWAAVWNAG+RV+DI DIR+P+ VG Y+YHPPFPEPTHT+L V  PVAGR IA+  DEEH+H  G  HAGLWVFDV     I+ LS+F V E  SP+S+ GRFG HQFQEHL+DT ++
Sbjct:  189 MEGYVGNILVIYDLAKPEAPEEVSRWWLPGQHVAGGEMPTWEAYKNRLHHALRTGDELWAAVWNAGLRVIDISDIRHPRTVGEYNYHPPFPEPTHTVLPVRIPVAGRRIAVAVDEEHEHIPGQPHAGLWVFDVTDLGNIRPLSLFQVSELDSPWSRRGRFGAHQFQEHLSDTLVY 363          
BLAST of mRNA_P-wetherbeei_contig52986.1.1 vs. uniprot
Match: A0A541BYC9_9PROT (RNA polymerase subunit sigma-70 n=2 Tax=Elioraea sp. Yellowstone TaxID=2592070 RepID=A0A541BYC9_9PROT)

HSP 1 Score: 265 bits (676), Expect = 8.350e-85
Identity = 116/176 (65.91%), Postives = 136/176 (77.27%), Query Frame = 0
Query:    1 MEGYIGNILVIYDLKDPANPTEVSRWWMPGQHVAAGEIPTWKGYKNRLHHALRHKDELWAAVWNAGIRVLDIKDIRNPKVVGAYDYHPPFPEPTHTILKVPFPVAGRDIAIGADEEHDHTYGNLHAGLWVFDVEKRDEIKALSMFHVPERMSPFSQIG-RFGMHQFQEHLTDTRLF 175
            MEGY+GNILVIYD++DPA P EV RWWMPGQH+A GE P+W G ++RLHHALRH D L+AAVW AG R++DI DI  P+ +G Y YHPPFPEPTHT L+VPFPV GR +A+  DEEHDH  G LH GLWVFDV    +I+ +SMFH+ E  SP+ Q G RFG HQFQE L DTRLF
Sbjct:  184 MEGYVGNILVIYDMRDPARPEEVGRWWMPGQHIAGGETPSWPGQQHRLHHALRHGDRLYAAVWYAGCRIIDISDIARPRTIGEYRYHPPFPEPTHTFLRVPFPVKGRTLAVAVDEEHDHVPGQLHGGLWVFDVADETDIRPVSMFHLSELASPYVQAGGRFGAHQFQERLADTRLF 359          
BLAST of mRNA_P-wetherbeei_contig52986.1.1 vs. uniprot
Match: UPI00062B9BBF (DNA-directed RNA polymerase sigma-70 factor n=1 Tax=Microvirga massiliensis TaxID=1033741 RepID=UPI00062B9BBF)

HSP 1 Score: 261 bits (666), Expect = 2.540e-83
Identity = 113/176 (64.20%), Postives = 135/176 (76.70%), Query Frame = 0
Query:    1 MEGYIGNILVIYDLKDPANPTEVSRWWMPGQHVAAGEIPTWKGYKNRLHHALRHKDELWAAVWNAGIRVLDIKDIRNPKVVGAYDYHPPFPEPTHTILKVPFPVAGRDIAIGADEEHDHTYGNLHAGLWVFDVEKRDEIKALSMFHVPERMSPFSQIGRFGMHQFQEHLTDTRLFC 176
            MEG++GNILV+YD+ DP+ PTEVSRWWMPGQ+ A GE P WKG  +RLHHA+R  DELWAAVW AGIRV+D +DI N +  G ++YHPPFPEPTHT++ VP    GR +A+  DEEHDH  G LH GLW+ DVE R EIK L MFH+ E  SPFS+IGRFG HQFQEH+   RL+C
Sbjct:  183 MEGFLGNILVVYDIADPSRPTEVSRWWMPGQNTARGETPHWKGLSHRLHHAMRFGDELWAAVWYAGIRVIDARDITNLRTAGEFNYHPPFPEPTHTVVPVPVRWQGRQVAVAVDEEHDHRKGQLHGGLWLLDVENRSEIKPLGMFHLSELDSPFSRIGRFGAHQFQEHVKGDRLYC 358          
BLAST of mRNA_P-wetherbeei_contig52986.1.1 vs. uniprot
Match: A0A317FG51_9PROT (RNA polymerase subunit sigma-70 n=2 Tax=Acetobacteraceae TaxID=433 RepID=A0A317FG51_9PROT)

HSP 1 Score: 258 bits (659), Expect = 3.140e-82
Identity = 115/176 (65.34%), Postives = 139/176 (78.98%), Query Frame = 0
Query:    1 MEGYIGNILVIYDLKDPANPTEVSRWWMPGQHVAAGEIPTWKGYKNRLHHALRHKDELWAAVWNAGIRVLDIKDIRNPKVVGAYDYHPPFPEPTHTILKVPFPVAGRDIAIGADEEHDHTYGNLHAGLWVFDVEKRDEIKALSMFHVPERMSPFSQIG-RFGMHQFQEHLTDTRLF 175
            MEGY+GNILVIYD+ DPA P EVSRW MPGQHVAAGE+PTW+G ++RLHH LRH D+L+AAVW AG R+LD+ DI  PKVVG Y YHPPFPEPTHT ++VPF + GRDIA+  DEEH+H  G LH GLWVFDV    +I+ LSM+H+ E  +P+ + G RFG HQFQEH+ DT L+
Sbjct:  185 MEGYVGNILVIYDIADPAKPREVSRWHMPGQHVAAGEVPTWQGQQHRLHHTLRHGDQLFAAVWYAGCRILDVSDITRPKVVGEYRYHPPFPEPTHTFMRVPFQIGGRDIAVAVDEEHEHVAGQLHGGLWVFDVTDPAKIQPLSMWHLTELDNPYVKAGGRFGAHQFQEHMEDTCLY 360          
BLAST of mRNA_P-wetherbeei_contig52986.1.1 vs. uniprot
Match: UPI0018731C07 (RNA polymerase subunit sigma-70 n=1 Tax=Pelagibius sp. NBU2595 TaxID=2762760 RepID=UPI0018731C07)

HSP 1 Score: 251 bits (640), Expect = 2.350e-79
Identity = 118/177 (66.67%), Postives = 137/177 (77.40%), Query Frame = 0
Query:    1 MEGYIGNILVIYDLKDPANPTEVSRWWMPGQHVAAGEIPTWKGYKNRLHHALRHKDELWAAVWNAGIRVLDIKDIRNPKVVGAYDYHPPFPEPTHTILKVPFPVAGRDIAIGADEEHDHTYGNLHAGLWVFDVEKRDEIKALSMFHVPERMSPFSQI-GRFGMHQFQEHLTDTRLFC 176
            MEGY+GNILVIYDLKDPA+P EVSRW MPGQH+AAGE PTW+GYKNRLHHALR  DE+WA+VW+AG RVLD+ DI  P+ V ++DYHPPFPEPTHTIL V   VAGR IA+  DEEHDH  G LHA LWVFDV   D I ALS F V E  SP+++  GRFG HQF+E L +  ++ 
Sbjct:  185 MEGYLGNILVIYDLKDPADPQEVSRWHMPGQHIAAGEKPTWQGYKNRLHHALRVGDEMWASVWHAGFRVLDVSDITRPRTVASHDYHPPFPEPTHTILPVAGTVAGRRIAVAVDEEHDHVAGRLHAFLWVFDVTDFDNITALSAFDVSELDSPWARSPGRFGAHQFREKLDEPLVYA 361          
BLAST of mRNA_P-wetherbeei_contig52986.1.1 vs. uniprot
Match: UPI001666D717 (RNA polymerase subunit sigma-70 n=1 Tax=Alsobacter metallidurans TaxID=340221 RepID=UPI001666D717)

HSP 1 Score: 248 bits (634), Expect = 1.640e-78
Identity = 112/176 (63.64%), Postives = 131/176 (74.43%), Query Frame = 0
Query:    1 MEGYIGNILVIYDLKDPANPTEVSRWWMPGQHVAAGEIPTWKGYKNRLHHALRHKDELWAAVWNAGIRVLDIKDIRNPKVVGAYDYHPPFPEPTHTILKVPFPVAGRDIAIGADEEHDHTYGNLHAGLWVFDVEKRDEIKALSMFHVPERMSPFSQIGRFGMHQFQEHLTDTRLFC 176
            MEGY GNILVIYD+++P  P EVSRWWMPGQH A GE P W+G  NRLHHA+R  DELWAAVW AG+R +DI DIRNP+ V  ++YHPP PEPTHTIL    P+ GR IA+G DEEHDHT G  HA LW+FDV    E + +S FHV E  SP+++ GRFG HQFQEH+  T LFC
Sbjct:  183 MEGYRGNILVIYDIRNPERPAEVSRWWMPGQHEAGGETPFWRGESNRLHHAMRAGDELWAAVWYAGVRRIDISDIRNPRTVAEFNYHPPTPEPTHTILPALTPIGGRRIAVGVDEEHDHTPGQPHAHLWIFDVSD-GEFRPISTFHVSELDSPYAREGRFGAHQFQEHIDGTLLFC 357          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52986.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C4XND0_9HYPH1.710e-9774.01RNA polymerase subunit sigma-70 n=1 Tax=Hyphomicro... [more]
A0A1F4A3R3_9PROT5.190e-9070.86RNA polymerase subunit sigma-70 n=2 Tax=unclassifi... [more]
A0A6I7P5N7_9PROT8.860e-8968.00RNA polymerase subunit sigma-70 n=1 Tax=Geminicocc... [more]
W9HA84_9PROT1.410e-8667.23Uncharacterized protein n=1 Tax=Skermanella stibii... [more]
A0A1F4DGU0_9PROT2.170e-8669.14RNA polymerase subunit sigma-70 n=1 Tax=Betaproteo... [more]
A0A541BYC9_9PROT8.350e-8565.91RNA polymerase subunit sigma-70 n=2 Tax=Elioraea s... [more]
UPI00062B9BBF2.540e-8364.20DNA-directed RNA polymerase sigma-70 factor n=1 Ta... [more]
A0A317FG51_9PROT3.140e-8265.34RNA polymerase subunit sigma-70 n=2 Tax=Acetobacte... [more]
UPI0018731C072.350e-7966.67RNA polymerase subunit sigma-70 n=1 Tax=Pelagibius... [more]
UPI001666D7171.640e-7863.64RNA polymerase subunit sigma-70 n=1 Tax=Alsobacter... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig52986contigP-wetherbeei_contig52986:2..529 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig52986.1.1mRNA_P-wetherbeei_contig52986.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig52986 2..541 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig52986.1.1 ID=prot_P-wetherbeei_contig52986.1.1|Name=mRNA_P-wetherbeei_contig52986.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=176bp
MEGYIGNILVIYDLKDPANPTEVSRWWMPGQHVAAGEIPTWKGYKNRLHH
ALRHKDELWAAVWNAGIRVLDIKDIRNPKVVGAYDYHPPFPEPTHTILKV
PFPVAGRDIAIGADEEHDHTYGNLHAGLWVFDVEKRDEIKALSMFHVPER
MSPFSQIGRFGMHQFQEHLTDTRLFC
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