prot_P-wetherbeei_contig5280.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig5280.1.1
Unique Nameprot_P-wetherbeei_contig5280.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length103
Homology
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BLAST of mRNA_P-wetherbeei_contig5280.1.1 vs. uniprot
Match: A0A835Z651_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z651_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 5.170e-10
Identity = 28/52 (53.85%), Postives = 39/52 (75.00%), Query Frame = 0 
Query:    1 MMLKAQEFFSPTCKEIDTKELKMFCKAVSVGLQLVPRGSALVPPDVNKPELE 52
            +MLKAQEF SP+ +E+   ELK FC+   VGL+LVP+GS L PP+ NK +++
Sbjct:  105 LMLKAQEFHSPSPQELKLAELKQFCRESGVGLKLVPKGSGLTPPEANKTDVD 156
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5280.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835Z651_9STRA5.170e-1053.85Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021503Protein of unknown function DUF3110PFAMPF11360DUF3110coord: 1..45
e-value: 1.2E-9
score: 38.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5280contigP-wetherbeei_contig5280:1348..2175 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5280.1.1mRNA_P-wetherbeei_contig5280.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig5280 2..2880 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig5280.1.1 ID=prot_P-wetherbeei_contig5280.1.1|Name=mRNA_P-wetherbeei_contig5280.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=103bp
MMLKAQEFFSPTCKEIDTKELKMFCKAVSVGLQLVPRGSALVPPDVNKPE
LEYDPAAMKDRKKKSGAGRGGAAAAERMFSANEIDDIKSRFNRLYEETTR
DS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021503DUF3110