prot_P-wetherbeei_contig5276.4.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig5276.4.1
Unique Name	prot_P-wetherbeei_contig5276.4.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	130

Homology

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BLAST of mRNA_P-wetherbeei_contig5276.4.1 vs. uniprot
Match: A0A3C0TUE0_9PROT (Short chain dehydrogenase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TUE0_9PROT)

HSP 1 Score: 224 bits (571), Expect = 7.140e-72
Identity = 110/129 (85.27%), Postives = 118/129 (91.47%), Query Frame = 0

Query:    1 ASQHPHAQTGNVINIMDQRVWRLTPRYISYTLSKSALWTLTQTMAMALAPAIRVNGVGPGPTLPNEYQDEAQFARQAGSTILGRGAGLEEISAAVRFILASPSMTGQMIALDGGQHLAWETPDILGMED 129
            A Q P    GNVINI+DQRVWRLTPRY+SYTLSKSALWTLT+TMAMALAP IRVNG+GPGPTLPN+ QD AQFARQAGSTIL RGAGL+EI+AA RFILASPSMTGQMIALDGGQHLAWETPDI+GMED
Sbjct:  131 ARQLPKGAQGNVINILDQRVWRLTPRYLSYTLSKSALWTLTRTMAMALAPVIRVNGIGPGPTLPNDQQDAAQFARQAGSTILRRGAGLDEIAAAARFILASPSMTGQMIALDGGQHLAWETPDIVGMED 259

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BLAST of mRNA_P-wetherbeei_contig5276.4.1 vs. uniprot
Match: A0A2A5EU54_9HYPH (Short chain dehydrogenase n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2A5EU54_9HYPH)

HSP 1 Score: 190 bits (482), Expect = 2.310e-58
Identity = 90/124 (72.58%), Postives = 105/124 (84.68%), Query Frame = 0

Query:    5 PHAQTGNVINIMDQRVWRLTPRYISYTLSKSALWTLTQTMAMALAPAIRVNGVGPGPTLPNEYQDEAQFARQAGSTILGRGAGLEEISAAVRFILASPSMTGQMIALDGGQHLAWETPDILGME 128
            P   +GN+IN++DQRVWRLTPR++SYT++KS LWTLTQT+A ALAP IRVNG+GPGPTL N+ Q E  F  QA +T+LGRG  LEEI AAVRFILASP+MTGQMIALDGGQHLAWETPD +G E
Sbjct:  137 PEGTSGNIINMIDQRVWRLTPRFLSYTVAKSGLWTLTQTLAQALAPKIRVNGIGPGPTLCNDRQSETDFQAQAAATLLGRGPELEEICAAVRFILASPAMTGQMIALDGGQHLAWETPDAVGPE 260

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BLAST of mRNA_P-wetherbeei_contig5276.4.1 vs. uniprot
Match: A0A2Z4UKA5_9HYPH (3-oxoacyl-[acyl-carrier-protein] reductase FabG n=2 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2Z4UKA5_9HYPH)

HSP 1 Score: 186 bits (471), Expect = 8.940e-57
Identity = 90/128 (70.31%), Postives = 103/128 (80.47%), Query Frame = 0

Query:    1 ASQHPHAQTGNVINIMDQRVWRLTPRYISYTLSKSALWTLTQTMAMALAPAIRVNGVGPGPTLPNEYQDEAQFARQAGSTILGRGAGLEEISAAVRFILASPSMTGQMIALDGGQHLAWETPDILGME 128
            A Q P +  GN+INI+DQRVWRLTPR++SYT SK+ LWTLTQT+A ALAP IRVNG+GPGPTL N+ Q  A F  QA ST+L R   +EEI AAVRFILASP+MTGQMIALD GQHLAWETPD +G E
Sbjct:  127 AKQLPESNAGNIINIIDQRVWRLTPRFLSYTASKAGLWTLTQTLAQALAPKIRVNGIGPGPTLSNDRQSSADFEAQATSTLLQRQISMEEICAAVRFILASPAMTGQMIALDSGQHLAWETPDAIGPE 254

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BLAST of mRNA_P-wetherbeei_contig5276.4.1 vs. uniprot
Match: A0A081BD53_9HYPH (Short-chain dehydrogenase/reductase SDR n=1 Tax=Tepidicaulis marinus TaxID=1333998 RepID=A0A081BD53_9HYPH)

HSP 1 Score: 185 bits (470), Expect = 1.310e-56
Identity = 87/129 (67.44%), Postives = 106/129 (82.17%), Query Frame = 0

Query:    1 ASQHPHAQTGNVINIMDQRVWRLTPRYISYTLSKSALWTLTQTMAMALAPAIRVNGVGPGPTLPNEYQDEAQFARQAGSTILGRGAGLEEISAAVRFILASPSMTGQMIALDGGQHLAWETPDILGMED 129
            A+Q P    GN+INI+DQRVWRLTPR+ SYTLSK+ LWT+TQT+A ALAP IRVNG+GPGPTL N  Q++A F RQ  + +L RG  L EI+AA+RFIL SPS+TGQMIALDGGQHLAWETPD++G+ +
Sbjct:  127 AAQLPDGAQGNIINIIDQRVWRLTPRFFSYTLSKAGLWTMTQTLAQALAPRIRVNGIGPGPTLKNARQEDADFTRQQEALLLRRGPALGEITAAIRFILESPSLTGQMIALDGGQHLAWETPDVVGIPE 255

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BLAST of mRNA_P-wetherbeei_contig5276.4.1 vs. uniprot
Match: A0A2D8XG93_9HYPH (Short chain dehydrogenase n=1 Tax=Parvibaculum sp. TaxID=2024848 RepID=A0A2D8XG93_9HYPH)

HSP 1 Score: 181 bits (458), Expect = 8.310e-55
Identity = 88/128 (68.75%), Postives = 101/128 (78.91%), Query Frame = 0

Query:    1 ASQHPHAQTGNVINIMDQRVWRLTPRYISYTLSKSALWTLTQTMAMALAPAIRVNGVGPGPTLPNEYQDEAQFARQAGSTILGRGAGLEEISAAVRFILASPSMTGQMIALDGGQHLAWETPDILGME 128
            A Q P + +GN+INI+DQRVWRLTPR++SYT SK+ LWTLTQT+A +LAP IRVNG+GPGPTL N+ Q  A F  Q  ST L R    EEI AAVRFILASP+MTGQMIALD GQHLAWETPD +G E
Sbjct:  127 AKQLPESNSGNIINIIDQRVWRLTPRFLSYTTSKAGLWTLTQTLAQSLAPKIRVNGIGPGPTLSNDRQSNADFQAQVASTPLQRQISTEEIRAAVRFILASPAMTGQMIALDSGQHLAWETPDAVGPE 254

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BLAST of mRNA_P-wetherbeei_contig5276.4.1 vs. uniprot
Match: A0A2N3E0Y1_9PROT (Short-chain dehydrogenase (Fragment) n=1 Tax=Alphaproteobacteria bacterium HGW-Alphaproteobacteria-12 TaxID=2013658 RepID=A0A2N3E0Y1_9PROT)

HSP 1 Score: 177 bits (450), Expect = 9.760e-55
Identity = 85/129 (65.89%), Postives = 101/129 (78.29%), Query Frame = 0

Query:    1 ASQHPHAQTGNVINIMDQRVWRLTPRYISYTLSKSALWTLTQTMAMALAPAIRVNGVGPGPTLPNEYQDEAQFARQAGSTILGRGAGLEEISAAVRFILASPSMTGQMIALDGGQHLAWETPDILGMED 129
            A+Q P    GN++NI+DQRVW  TPR+ SYT+SK ALW +TQ MA +LAP IRVNG+GPGPTL N  Q  A F RQ  +TILGRG   EEI  A+RFILASP+MTGQMIALDGGQHLAWETPD++G+ +
Sbjct:   40 AAQLPAGIEGNIVNIVDQRVWAPTPRFFSYTISKMALWDMTQVMARSLAPRIRVNGIGPGPTLANARQSAADFERQTRATILGRGTTPEEICTALRFILASPAMTGQMIALDGGQHLAWETPDVIGISE 168

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BLAST of mRNA_P-wetherbeei_contig5276.4.1 vs. uniprot
Match: A0A836TQ82_9PROT (SDR family oxidoreductase n=1 Tax=Sneathiellales bacterium TaxID=2528251 RepID=A0A836TQ82_9PROT)

HSP 1 Score: 180 bits (457), Expect = 1.180e-54
Identity = 86/117 (73.50%), Postives = 104/117 (88.89%), Query Frame = 0

Query:    7 AQTGNVINIMDQRVWRLTPRYISYTLSKSALWTLTQTMAMALAPAIRVNGVGPGPTLPNEYQDEAQFARQAGSTILGRGAGLEEISAAVRFILASPSMTGQMIALDGGQHLAWETPD 123
            A  GNVINI+DQRVW+LTP ++SYT+SK+ALWTLTQT+AMALAP IRVNGVGPGPTLP+  Q +AQFA+Q  ST+L RGA  EEI AA++FIL++PSMTGQMIALDGGQHLAW++P+
Sbjct:  132 ADGGNVINILDQRVWKLTPFFLSYTVSKAALWTLTQTLAMALAPGIRVNGVGPGPTLPSPRQTDAQFAQQCASTLLQRGASPEEICAAIQFILSTPSMTGQMIALDGGQHLAWQSPE 248

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BLAST of mRNA_P-wetherbeei_contig5276.4.1 vs. uniprot
Match: A7HVF9_PARL1 (Short-chain dehydrogenase/reductase SDR n=2 Tax=Parvibaculum lavamentivorans TaxID=256618 RepID=A7HVF9_PARL1)

HSP 1 Score: 179 bits (455), Expect = 2.510e-54
Identity = 85/129 (65.89%), Postives = 103/129 (79.84%), Query Frame = 0

Query:    1 ASQHPHAQTGNVINIMDQRVWRLTPRYISYTLSKSALWTLTQTMAMALAPAIRVNGVGPGPTLPNEYQDEAQFARQAGSTILGRGAGLEEISAAVRFILASPSMTGQMIALDGGQHLAWETPDILGMED 129
            A+Q P    GN++NI+DQRVW  TP+++SYTLSK ALW +TQ +A +LAP IRVNG+GPGPTL N+ Q  A F RQ  STILGRG   EEI AA+RFILA+P+MTGQMIALDGGQHLAWETPD+ G+ +
Sbjct:  128 AAQLPAGAKGNIVNIIDQRVWAPTPKFLSYTLSKMALWDMTQVLARSLAPHIRVNGIGPGPTLANQRQSAADFERQTASTILGRGTTPEEICAALRFILAAPAMTGQMIALDGGQHLAWETPDVTGISE 256

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BLAST of mRNA_P-wetherbeei_contig5276.4.1 vs. uniprot
Match: A0A353LSQ4_9PROT (Short chain dehydrogenase (Fragment) n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A353LSQ4_9PROT)

HSP 1 Score: 176 bits (446), Expect = 8.150e-54
Identity = 86/129 (66.67%), Postives = 100/129 (77.52%), Query Frame = 0

Query:    1 ASQHPHAQTGNVINIMDQRVWRLTPRYISYTLSKSALWTLTQTMAMALAPAIRVNGVGPGPTLPNEYQDEAQFARQAGSTILGRGAGLEEISAAVRFILASPSMTGQMIALDGGQHLAWETPDILGMED 129
            A+Q P    GNVINI+DQRVWRLTPR+ SYTLSK+ LWT+TQT A ALAP IRVN + PGPTL N  Q    FA Q  + +L +GA LEE  AAVRFILA+ SMTGQMIALDGGQHLAWETPD+ G+++
Sbjct:   63 AAQLPEPMRGNVINIIDQRVWRLTPRFFSYTLSKAGLWTMTQTAAQALAPRIRVNAIAPGPTLRNARQSAEDFAAQEKNVLLQQGAALEEFGAAVRFILAAQSMTGQMIALDGGQHLAWETPDVHGLDE 191

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BLAST of mRNA_P-wetherbeei_contig5276.4.1 vs. uniprot
Match: A0A2E5BTJ2_9HYPH (Short chain dehydrogenase n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2E5BTJ2_9HYPH)

HSP 1 Score: 177 bits (449), Expect = 1.860e-53
Identity = 84/127 (66.14%), Postives = 100/127 (78.74%), Query Frame = 0

Query:    2 SQHPHAQTGNVINIMDQRVWRLTPRYISYTLSKSALWTLTQTMAMALAPAIRVNGVGPGPTLPNEYQDEAQFARQAGSTILGRGAGLEEISAAVRFILASPSMTGQMIALDGGQHLAWETPDILGME 128
            +Q P  Q GN+IN++DQRVWRLTPR++SYT SK+ LWTLTQT+A  LAP +RVN +GPGP L NE Q EA F  Q  +T+L RG  L+EI  A+RFILA+PSMTGQMIALDGGQHLAW TPD +G E
Sbjct:  127 NQLPRHQKGNIINLIDQRVWRLTPRFLSYTASKAGLWTLTQTLAQGLAPHVRVNAIGPGPVLTNERQKEADFEAQVKATLLQRGPELDEICQAIRFILAAPSMTGQMIALDGGQHLAWATPDAIGPE 253

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig5276.4.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig5276.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A3C0TUE0_9PROT	7.140e-72	85.27	Short chain dehydrogenase n=1 Tax=Alphaproteobacte...	[more]
A0A2A5EU54_9HYPH	2.310e-58	72.58	Short chain dehydrogenase n=1 Tax=Rhodobiaceae bac...	[more]
A0A2Z4UKA5_9HYPH	8.940e-57	70.31	3-oxoacyl-[acyl-carrier-protein] reductase FabG n=...	[more]
A0A081BD53_9HYPH	1.310e-56	67.44	Short-chain dehydrogenase/reductase SDR n=1 Tax=Te...	[more]
A0A2D8XG93_9HYPH	8.310e-55	68.75	Short chain dehydrogenase n=1 Tax=Parvibaculum sp....	[more]
A0A2N3E0Y1_9PROT	9.760e-55	65.89	Short-chain dehydrogenase (Fragment) n=1 Tax=Alpha...	[more]
A0A836TQ82_9PROT	1.180e-54	73.50	SDR family oxidoreductase n=1 Tax=Sneathiellales b...	[more]
A7HVF9_PARL1	2.510e-54	65.89	Short-chain dehydrogenase/reductase SDR n=2 Tax=Pa...	[more]
A0A353LSQ4_9PROT	8.150e-54	66.67	Short chain dehydrogenase (Fragment) n=2 Tax=Alpha...	[more]
A0A2E5BTJ2_9HYPH	1.860e-53	66.14	Short chain dehydrogenase n=1 Tax=Rhodobiaceae bac...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002347	Short-chain dehydrogenase/reductase SDR	PRINTS	PR00081	GDHRDH	coord: 30..49 score: 33.63 coord: 50..67 score: 35.14 coord: 81..101 score: 24.37
None	No IPR available	GENE3D	3.40.50.720		coord: 1..129 e-value: 8.3E-23 score: 83.0
None	No IPR available	PFAM	PF13561	adh_short_C2	coord: 8..116 e-value: 1.4E-14 score: 54.2
None	No IPR available	PIRSR	PIRSR629511-2	PIRSR629511-2	coord: 10..60 e-value: 1.8E-4 score: 18.5
None	No IPR available	PIRSR	PIRSR000094-3	PIRSR000094-3	coord: 22..117 e-value: 9.7E-4 score: 16.2
None	No IPR available	PIRSR	PIRSR617711-1	PIRSR617711-1	coord: 28..61 e-value: 2.1E-5 score: 21.6
None	No IPR available	PIRSR	PIRSR629511-1	PIRSR629511-1	coord: 10..60 e-value: 1.8E-4 score: 18.5
None	No IPR available	PIRSR	PIRSR617711-2	PIRSR617711-2	coord: 28..61 e-value: 2.1E-5 score: 21.6
None	No IPR available	PANTHER	PTHR43639	OXIDOREDUCTASE, SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY (AFU_ORTHOLOGUE AFUA_5G02870)	coord: 7..118
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 9..117

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig5276	contig	P-wetherbeei_contig5276:3540..3929 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig5276.4.1	mRNA_P-wetherbeei_contig5276.4.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig5276 3540..3929 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig5276.4.1 ID=prot_P-wetherbeei_contig5276.4.1|Name=mRNA_P-wetherbeei_contig5276.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=130bp
ASQHPHAQTGNVINIMDQRVWRLTPRYISYTLSKSALWTLTQTMAMALAP
AIRVNGVGPGPTLPNEYQDEAQFARQAGSTILGRGAGLEEISAAVRFILA
SPSMTGQMIALDGGQHLAWETPDILGMED*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002347	SDR_fam
IPR036291	NAD(P)-bd_dom_sf