prot_P-wetherbeei_contig527.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig527.1.1
Unique Nameprot_P-wetherbeei_contig527.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length157
Homology
BLAST of mRNA_P-wetherbeei_contig527.1.1 vs. uniprot
Match: A0A835YXL6_9STRA (S1-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXL6_9STRA)

HSP 1 Score: 146 bits (368), Expect = 3.840e-42
Identity = 76/106 (71.70%), Postives = 87/106 (82.08%), Query Frame = 0
Query:   50 PMRTASASAMALLAKKRGGPDKGSEGAKPRERKQKDDVIEVEGVVKESLPNAMFRVELSGNSNVILCTISGKIRQNFVRILVGDPVKVELSPYDLTRGRITFRYKK 155
            PM +       +  KK+G   + +EGA PRE+K KDDVIEVEGVVKESLP+AMFRVE+S  + +ILCTISGKIR+NFVRILVGDPVKVELSPYDLTRGRITFRYKK
Sbjct:   40 PMESRRQCTTIMHQKKKGRGGQNTEGATPREKKVKDDVIEVEGVVKESLPSAMFRVEISPTNQIILCTISGKIRKNFVRILVGDPVKVELSPYDLTRGRITFRYKK 145          
BLAST of mRNA_P-wetherbeei_contig527.1.1 vs. uniprot
Match: A0A6H5KG72_9PHAE (S1-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG72_9PHAE)

HSP 1 Score: 146 bits (368), Expect = 9.250e-42
Identity = 75/101 (74.26%), Postives = 85/101 (84.16%), Query Frame = 0
Query:   55 SASAMALLAKKRGGPDKGSEGAKPRERKQKDDVIEVEGVVKESLPNAMFRVELSGNSNVILCTISGKIRQNFVRILVGDPVKVELSPYDLTRGRITFRYKK 155
            +A+  ALLAK        +EGAKPRERK+KDDVIEVEGVVKE LP+AMFRVE+     V+LCTISG+IR+NFVRILVGDPV+VELSPYDLTRGRITFRYKK
Sbjct:   74 AAATSALLAKXXXXXXXXNEGAKPRERKEKDDVIEVEGVVKEGLPSAMFRVEVGATGKVVLCTISGRIRKNFVRILVGDPVRVELSPYDLTRGRITFRYKK 174          
BLAST of mRNA_P-wetherbeei_contig527.1.1 vs. uniprot
Match: D7G916_ECTSI (S1-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G916_ECTSI)

HSP 1 Score: 136 bits (343), Expect = 1.560e-38
Identity = 77/127 (60.63%), Postives = 87/127 (68.50%), Query Frame = 0
Query:   56 ASAMALLAKKRGGPDKGSEGAKPRERKQKDDVIE---------------------------VEGVVKESLPNAMFRVELSGNSNVILCTISGKIRQNFVRILVGDPVKVELSPYDLTRGRITFRYKK 155
            A+  ALLAKK+G     +EGAKPRERK+KDDVIE                           VEGVVKE LP+AMFRVE+     V+LCTISG+IR+NFVRILVGDPV+VELSPYDLTRGRITFRYKK
Sbjct:    5 AATSALLAKKKGRGGGNNEGAKPRERKEKDDVIEPDSIFTSHAEKDCSAKACRMLVLLSQKVEGVVKEGLPSAMFRVEVGATGKVVLCTISGRIRKNFVRILVGDPVRVELSPYDLTRGRITFRYKK 131          
BLAST of mRNA_P-wetherbeei_contig527.1.1 vs. uniprot
Match: A0A6U1NIU1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1NIU1_9STRA)

HSP 1 Score: 129 bits (323), Expect = 4.070e-35
Identity = 62/72 (86.11%), Postives = 68/72 (94.44%), Query Frame = 0
Query:   84 KDDVIEVEGVVKESLPNAMFRVELSGNSNVILCTISGKIRQNFVRILVGDPVKVELSPYDLTRGRITFRYKK 155
            K+DVIEVEGVVKESLPNAMFRVEL  N NVILCTISGKIR+NFV++LVGD V+VELSPYDLTRGRITFRY+K
Sbjct:   90 KEDVIEVEGVVKESLPNAMFRVELEANQNVILCTISGKIRKNFVKVLVGDSVRVELSPYDLTRGRITFRYRK 161          
BLAST of mRNA_P-wetherbeei_contig527.1.1 vs. uniprot
Match: A0A7S4EBF0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EBF0_9STRA)

HSP 1 Score: 115 bits (287), Expect = 4.590e-30
Identity = 57/74 (77.03%), Postives = 64/74 (86.49%), Query Frame = 0
Query:   79 RERKQKDDVIEVEGVVKESLPNAMFRVELSGNSNVILCTISGKIRQNFVRILVGDPVKVELSPYDLTRGRITFR 152
            RERK KDD IEV+GVV E+LP+A FRVE+     V+LCTISGKIR+NFV+ILVGD VKVELSPYDLTRGRITFR
Sbjct:   54 RERKVKDDKIEVDGVVTEALPSANFRVEIGATKQVLLCTISGKIRKNFVKILVGDSVKVELSPYDLTRGRITFR 127          
BLAST of mRNA_P-wetherbeei_contig527.1.1 vs. uniprot
Match: W7THD1_9STRA (Translation initiation factor if-1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7THD1_9STRA)

HSP 1 Score: 110 bits (275), Expect = 8.200e-28
Identity = 52/72 (72.22%), Postives = 63/72 (87.50%), Query Frame = 0
Query:   81 RKQKDDVIEVEGVVKESLPNAMFRVELSGNSNVILCTISGKIRQNFVRILVGDPVKVELSPYDLTRGRITFR 152
            + ++ DVIEV+G+VKESLPNA FRVEL     VI+C+ SGK+R+NFVR+LVGDPVKVELSPYDLTRGRIT+R
Sbjct:   73 KNKESDVIEVDGIVKESLPNAKFRVELVATKAVIVCSTSGKMRKNFVRVLVGDPVKVELSPYDLTRGRITYR 144          
BLAST of mRNA_P-wetherbeei_contig527.1.1 vs. uniprot
Match: A0A7R9YY09_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9YY09_9STRA)

HSP 1 Score: 108 bits (270), Expect = 3.440e-27
Identity = 56/77 (72.73%), Postives = 64/77 (83.12%), Query Frame = 0
Query:   79 RERKQKDDVIEVEGVVKESLPNAMFRVELSGNSNV---ILCTISGKIRQNFVRILVGDPVKVELSPYDLTRGRITFR 152
            RE+K+KDDVIEVEGVV ESLPNAMFR  + G  +    +L TISGKIR+NFV+ILVGD V +ELSPYDLTRGRITFR
Sbjct:   77 REKKKKDDVIEVEGVVLESLPNAMFRCAIDGAPDTQEPVLATISGKIRKNFVKILVGDKVTIELSPYDLTRGRITFR 153          
BLAST of mRNA_P-wetherbeei_contig527.1.1 vs. uniprot
Match: A0A7S4KRC9_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KRC9_GUITH)

HSP 1 Score: 107 bits (267), Expect = 7.170e-27
Identity = 53/73 (72.60%), Postives = 60/73 (82.19%), Query Frame = 0
Query:   82 KQKDDVIEVEGVVKESLPNAMFRVELSGNSNVILCTISGKIRQNFVRILVGDPVKVELSPYDLTRGRITFRYK 154
            K+K D IE++GVV ESLPNAMFRVEL  N  VIL  ISGKIR+NF++IL GD V  ELSPYDLT+GRITFRYK
Sbjct:   72 KKKKDCIELDGVVTESLPNAMFRVELEANQQVILAHISGKIRKNFIKILPGDKVTCELSPYDLTKGRITFRYK 144          
BLAST of mRNA_P-wetherbeei_contig527.1.1 vs. uniprot
Match: W7D6D1_9LIST (Translation initiation factor IF-1 n=3 Tax=Bacilli TaxID=91061 RepID=W7D6D1_9LIST)

HSP 1 Score: 105 bits (261), Expect = 7.480e-27
Identity = 51/71 (71.83%), Postives = 62/71 (87.32%), Query Frame = 0
Query:   84 KDDVIEVEGVVKESLPNAMFRVELSGNSNVILCTISGKIRQNFVRILVGDPVKVELSPYDLTRGRITFRYK 154
            K+DVIEVEGV+KE+LPNAMF+VEL  N + +L TISGKIR +++RIL GD V VELSPYDLTRGRIT+R+K
Sbjct:    3 KEDVIEVEGVIKETLPNAMFKVELE-NGHAVLATISGKIRMHYIRILPGDKVTVELSPYDLTRGRITYRFK 72          
BLAST of mRNA_P-wetherbeei_contig527.1.1 vs. uniprot
Match: A0A7S0F076_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0F076_9CRYP)

HSP 1 Score: 107 bits (267), Expect = 8.710e-27
Identity = 53/73 (72.60%), Postives = 60/73 (82.19%), Query Frame = 0
Query:   82 KQKDDVIEVEGVVKESLPNAMFRVELSGNSNVILCTISGKIRQNFVRILVGDPVKVELSPYDLTRGRITFRYK 154
            K+K D IE++GVV ESLPNAMFRVEL  N  VIL  ISGKIR+NF++IL GD V  ELSPYDLT+GRITFRYK
Sbjct:   79 KKKKDCIELDGVVTESLPNAMFRVELEANQQVILAHISGKIRKNFIKILPGDKVTCELSPYDLTKGRITFRYK 151          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig527.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YXL6_9STRA3.840e-4271.70S1-like domain-containing protein n=1 Tax=Tribonem... [more]
A0A6H5KG72_9PHAE9.250e-4274.26S1-like domain-containing protein n=1 Tax=Ectocarp... [more]
D7G916_ECTSI1.560e-3860.63S1-like domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6U1NIU1_9STRA4.070e-3586.11Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S4EBF0_9STRA4.590e-3077.03Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
W7THD1_9STRA8.200e-2872.22Translation initiation factor if-1 n=2 Tax=Monodop... [more]
A0A7R9YY09_9STRA3.440e-2772.73Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S4KRC9_GUITH7.170e-2772.60Hypothetical protein n=2 Tax=Guillardia theta TaxI... [more]
W7D6D1_9LIST7.480e-2771.83Translation initiation factor IF-1 n=3 Tax=Bacilli... [more]
A0A7S0F076_9CRYP8.710e-2772.60Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006196RNA-binding domain, S1, IF1 typePFAMPF01176eIF-1acoord: 88..152
e-value: 9.3E-24
score: 83.0
IPR006196RNA-binding domain, S1, IF1 typePROSITEPS50832S1_IF1_TYPEcoord: 78..154
score: 18.137587
IPR004368Translation initiation factor IF-1TIGRFAMTIGR00008TIGR00008coord: 84..153
e-value: 3.5E-30
score: 101.8
IPR004368Translation initiation factor IF-1PANTHERPTHR33370TRANSLATION INITIATION FACTOR IF-1, CHLOROPLASTICcoord: 74..155
IPR004368Translation initiation factor IF-1HAMAPMF_00075IF_1coord: 82..154
score: 23.969437
IPR004368Translation initiation factor IF-1CDDcd04451S1_IF1coord: 88..152
e-value: 4.32188E-33
score: 109.918
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 75..154
e-value: 3.0E-34
score: 118.7
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 84..153
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..85
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..85
NoneNo IPR availablePANTHERPTHR33370:SF1TRANSLATION INITIATION FACTOR IF-1, CHLOROPLASTICcoord: 74..155

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig527contigP-wetherbeei_contig527:503..1415 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig527.1.1mRNA_P-wetherbeei_contig527.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig527 2..2087 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig527.1.1 ID=prot_P-wetherbeei_contig527.1.1|Name=mRNA_P-wetherbeei_contig527.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=157bp
MAGALRLVFVIAACILSVVCQAFVTPFPAATVARTAGALRPCPACDVARP
MRTASASAMALLAKKRGGPDKGSEGAKPRERKQKDDVIEVEGVVKESLPN
AMFRVELSGNSNVILCTISGKIRQNFVRILVGDPVKVELSPYDLTRGRIT
FRYKKQ*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006196RNA-binding_domain_S1_IF1
IPR004368TIF_IF1
IPR012340NA-bd_OB-fold