prot_P-wetherbeei_contig5269.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig5269.2.1
Unique Name	prot_P-wetherbeei_contig5269.2.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	247

Homology

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BLAST of mRNA_P-wetherbeei_contig5269.2.1 vs. uniprot
Match: A0A6H5KE80_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE80_9PHAE)

HSP 1 Score: 267 bits (682), Expect = 1.330e-87
Identity = 139/192 (72.40%), Postives = 160/192 (83.33%), Query Frame = 0

Query:   56 SRNVKWVRVASKPIGVGKSSLVLRFVTNNFKPYSESTIGASFMSKMIMIETTPIKFQIWDTAGQEKYHSLAPMYYRGAGAAIIVYDITNRQSFKTLKDWVGELQQQGPPDIVIAIAGNKRDLEADREVEVSTARAYAEEIGAMFFETSAKDDTNVYNVFVELSKHLPEREPPPAPAKIDLSTSPS-SSSSCC 246
            SR VK V +     GVGKSSLV RFVTNNFKPYSESTIGASFMSKMIM++ +P+KFQIWDTAGQEKYHSLAPMYYRGAGAAI+VYDIT   SF+TLK+W+ ELQ QGP DI IA+AGNKRDLE+ REVE S A+AYA+EIGAMF ETSAKD T+V ++FVELSK LP+REP P  + +DL+   S +SSSCC
Sbjct:   11 SREVKVVLLGDT--GVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQREVESSMAQAYADEIGAMFVETSAKDATHVQDMFVELSKRLPKREPLPPASGVDLNLDSSGASSSCC 200

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BLAST of mRNA_P-wetherbeei_contig5269.2.1 vs. uniprot
Match: F0WNT1_9STRA (Rab5 family GTPase putative n=3 Tax=Albugo TaxID=65356 RepID=F0WNT1_9STRA)

HSP 1 Score: 241 bits (615), Expect = 1.860e-77
Identity = 122/167 (73.05%), Postives = 141/167 (84.43%), Query Frame = 0

Query:   56 SRNVKWVRVASKPIGVGKSSLVLRFVTNNFKPYSESTIGASFMSKMIMIETTPIKFQIWDTAGQEKYHSLAPMYYRGAGAAIIVYDITNRQSFKTLKDWVGELQQQGPPDIVIAIAGNKRDLEADREVEVSTARAYAEEIGAMFFETSAKDDTNVYNVFVELSKHLP 222
            +R VK V +     GVGKSSLVLRFVTNNF+PYSESTIGASFMSKMIM+E TPIK+QIWDTAGQEKYHSLAPMYYRGA AAI+VYDIT +QS  TLK+WV EL+Q GP +IVIAIAGNK DLE  REV  + A+AYA+EIGA+F ETSAK+DTNV ++F+ +SK LP
Sbjct:    8 AREVKVVLLGDT--GVGKSSLVLRFVTNNFRPYSESTIGASFMSKMIMVENTPIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLATLKNWVKELKQLGPENIVIAIAGNKSDLEDKREVPSAQAKAYADEIGALFIETSAKEDTNVSDLFISISKQLP 172

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BLAST of mRNA_P-wetherbeei_contig5269.2.1 vs. uniprot
Match: D0N0I0_PHYIT (Rab5 family GTPase, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N0I0_PHYIT)

HSP 1 Score: 238 bits (608), Expect = 2.300e-76
Identity = 122/170 (71.76%), Postives = 141/170 (82.94%), Query Frame = 0

Query:   53 NRISRNVKWVRVASKPIGVGKSSLVLRFVTNNFKPYSESTIGASFMSKMIMIETTPIKFQIWDTAGQEKYHSLAPMYYRGAGAAIIVYDITNRQSFKTLKDWVGELQQQGPPDIVIAIAGNKRDLEADREVEVSTARAYAEEIGAMFFETSAKDDTNVYNVFVELSKHLP 222
            N  +R VK V +     GVGKSSLVLRFVTNNF+PYSESTIGASFMSKMI++  TPIK+QIWDTAGQEKYHSLAPMYYRGA AAI+VYDIT +QS  TLK+WV EL+Q GP +IVIAIAGNK DLE  REV  S ARAYA EIGA+F ETSAK+DTNV ++F+++S+ LP
Sbjct:    6 NSKAREVKVVLLGDT--GVGKSSLVLRFVTNNFRPYSESTIGASFMSKMIVVNDTPIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLTTLKNWVKELKQLGPDNIVIAIAGNKSDLEEKREVPASQARAYAGEIGALFIETSAKEDTNVSDLFIQISQALP 173

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BLAST of mRNA_P-wetherbeei_contig5269.2.1 vs. uniprot
Match: K3X978_GLOUD (Uncharacterized protein n=22 Tax=Oomycota TaxID=4762 RepID=K3X978_GLOUD)

HSP 1 Score: 238 bits (607), Expect = 3.150e-76
Identity = 121/167 (72.46%), Postives = 140/167 (83.83%), Query Frame = 0

Query:   56 SRNVKWVRVASKPIGVGKSSLVLRFVTNNFKPYSESTIGASFMSKMIMIETTPIKFQIWDTAGQEKYHSLAPMYYRGAGAAIIVYDITNRQSFKTLKDWVGELQQQGPPDIVIAIAGNKRDLEADREVEVSTARAYAEEIGAMFFETSAKDDTNVYNVFVELSKHLP 222
            +R VK V +     GVGKSSLVLRFVTNNF+PYSESTIGASFMSKMI++  TPIK+QIWDTAGQEKYHSLAPMYYRGA AAI+VYDIT +QS  TLK+WV EL+Q GP +IVIAIAGNK DLE  REV  S ARAYAEEIGA+F ETSAK+D NV ++F+++S+ LP
Sbjct:    8 AREVKVVLLGDT--GVGKSSLVLRFVTNNFRPYSESTIGASFMSKMIVVNDTPIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLTTLKNWVKELKQLGPDNIVIAIAGNKSDLEEKREVPASQARAYAEEIGALFIETSAKEDRNVSDLFIQISQALP 172

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BLAST of mRNA_P-wetherbeei_contig5269.2.1 vs. uniprot
Match: A0A7S2SUM8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUM8_9STRA)

HSP 1 Score: 232 bits (591), Expect = 8.160e-74
Identity = 120/192 (62.50%), Postives = 145/192 (75.52%), Query Frame = 0

Query:   56 SRNVKWVRVASKPIGVGKSSLVLRFVTNNFKPYSESTIGASFMSKMIMIETTPIKFQIWDTAGQEKYHSLAPMYYRGAGAAIIVYDITNRQSFKTLKDWVGELQQQGPPDIVIAIAGNKRDLEADREVEVSTARAYAEEIGAMFFETSAKDDTNVYNVFVELSKHLPEREPPPA-PAKIDLSTSPSSSSSCC 246
            +R VK V +     GVGKSSLVLRF+TN FK Y ESTIGASFMSK+IM++ +PIKFQIWDTAGQEKYHSLAPMYY+GA AAI+VYDIT   +F+TLKDWV EL+ QGP +IVIA+AGNK DLE++REV+ +TA++YA  IGA F ETSAK   NV  +F  +SK LPE+E       K++L     SS  CC
Sbjct:    9 AREVKVVLLGDT--GVGKSSLVLRFITNEFKQYQESTIGASFMSKLIMVDGSPIKFQIWDTAGQEKYHSLAPMYYKGAAAAIVVYDITKESTFQTLKDWVAELRSQGPENIVIAVAGNKSDLESEREVDTATAQSYAHSIGASFLETSAKTKANVDEIFSNISKQLPEQERAGQYHNKLNLKAGKGSSGGCC 198

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BLAST of mRNA_P-wetherbeei_contig5269.2.1 vs. uniprot
Match: A0A067CI89_SAPPC (Uncharacterized protein n=7 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CI89_SAPPC)

HSP 1 Score: 228 bits (581), Expect = 2.590e-72
Identity = 116/167 (69.46%), Postives = 138/167 (82.63%), Query Frame = 0

Query:   56 SRNVKWVRVASKPIGVGKSSLVLRFVTNNFKPYSESTIGASFMSKMIMIETTPIKFQIWDTAGQEKYHSLAPMYYRGAGAAIIVYDITNRQSFKTLKDWVGELQQQGPPDIVIAIAGNKRDLEADREVEVSTARAYAEEIGAMFFETSAKDDTNVYNVFVELSKHLP 222
            +R VK V +     GVGKSSLVLRFVTNNF+PYSESTIGASFMSKM+++    IK+QIWDTAGQEKYHSLAPMYYRGA AAI+VYDIT +QS +TLK+WV EL+Q GP +IVIAIAGNK DL+  REV   TA+AYA+EIGA+F ETSAK+DTNV ++F  +S+ LP
Sbjct:    7 AREVKVVLLGDT--GVGKSSLVLRFVTNNFRPYSESTIGASFMSKMLLVGDQAIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLQTLKNWVKELKQLGPDNIVIAIAGNKSDLKDKREVSSETAKAYADEIGAVFIETSAKEDTNVSDLFKTISQQLP 171

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BLAST of mRNA_P-wetherbeei_contig5269.2.1 vs. uniprot
Match: A0A7S1CIP5_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CIP5_9STRA)

HSP 1 Score: 230 bits (586), Expect = 6.950e-72
Identity = 117/168 (69.64%), Postives = 136/168 (80.95%), Query Frame = 0

Query:   56 SRNVKWVRVASKPIGVGKSSLVLRFVTNNFKPYSESTIGASFMSKMIMIETTPIKFQIWDTAGQEKYHSLAPMYYRGAGAAIIVYDITNRQSFKTLKDWVGELQQQGPPDIVIAIAGNKRDLEADREVEVSTARAYAEEIGAMFFETSAKDDTNVYNVFVELSKHLPE 223
            +R VK V +     GVGKSSLVLRFVTNNFKPYSESTIGASFM+KM++I++TPIK+QIWDTAGQEKYHSLAPMYYRGA AAI+VYDIT   SF TLK+WV EL+Q GP DIVIAIAGNK DL   REVE   AR YA  IGA++ ETSAK D+NV  +FV+++  LP+
Sbjct:   89 AREVKVVLLGDT--GVGKSSLVLRFVTNNFKPYSESTIGASFMAKMMIIDSTPIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRAASFATLKNWVRELKQLGPEDIVIAIAGNKSDLAPQREVEEEDAREYARSIGALYIETSAKTDSNVKQLFVDIAMRLPD 254

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BLAST of mRNA_P-wetherbeei_contig5269.2.1 vs. uniprot
Match: A0A3R7AA57_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7AA57_9STRA)

HSP 1 Score: 228 bits (581), Expect = 9.190e-70
Identity = 116/167 (69.46%), Postives = 138/167 (82.63%), Query Frame = 0

Query:   56 SRNVKWVRVASKPIGVGKSSLVLRFVTNNFKPYSESTIGASFMSKMIMIETTPIKFQIWDTAGQEKYHSLAPMYYRGAGAAIIVYDITNRQSFKTLKDWVGELQQQGPPDIVIAIAGNKRDLEADREVEVSTARAYAEEIGAMFFETSAKDDTNVYNVFVELSKHLP 222
            +R VK V +     GVGKSSLVLRFVTNNF+PYSESTIGASFMSKM+++    IK+QIWDTAGQEKYHSLAPMYYRGA AAI+VYDIT +QS  TLK+WV EL+Q GP +IVIAIAGNK DL+  REV  +TA+AYA+EIGA+F ETSAK+DTNV ++F  +S+ LP
Sbjct:  199 AREVKVVLLGDT--GVGKSSLVLRFVTNNFRPYSESTIGASFMSKMLLVGDQAIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLVTLKNWVKELKQLGPDNIVIAIAGNKSDLDDKREVSSATAKAYADEIGAVFIETSAKEDTNVLDLFKTISQQLP 363

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BLAST of mRNA_P-wetherbeei_contig5269.2.1 vs. uniprot
Match: A0A5D6XGD9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XGD9_9STRA)

HSP 1 Score: 239 bits (609), Expect = 1.370e-68
Identity = 124/184 (67.39%), Postives = 145/184 (78.80%), Query Frame = 0

Query:   39 AVTIVRSSPRSPFYNRISRNVKWVRVASKPIGVGKSSLVLRFVTNNFKPYSESTIGASFMSKMIMIETTPIKFQIWDTAGQEKYHSLAPMYYRGAGAAIIVYDITNRQSFKTLKDWVGELQQQGPPDIVIAIAGNKRDLEADREVEVSTARAYAEEIGAMFFETSAKDDTNVYNVFVELSKHLP 222
            A+ +    P S      +R VK V +     GVGKSSLVLRFVTNNF+PYSESTIGASFMSKMI++  TPIK+QIWDTAGQEKYHSLAPMYYRGA AAI+VYDIT +QS  TLK+WV EL+Q GP +IVIAIAGNK DLE  REV  S ARAYAEEIGA+F ETSAK+D NV ++F+++S+ LP
Sbjct: 1201 ALRVASVKPASMADGGKAREVKVVLLGDT--GVGKSSLVLRFVTNNFRPYSESTIGASFMSKMIVVNDTPIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLATLKNWVKELKQLGPDNIVIAIAGNKSDLEEKREVPASQARAYAEEIGALFIETSAKEDRNVSDLFIQISQALP 1382

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BLAST of mRNA_P-wetherbeei_contig5269.2.1 vs. uniprot
Match: A0A7S1CIJ3_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CIJ3_9STRA)

HSP 1 Score: 214 bits (546), Expect = 2.560e-67
Identity = 105/147 (71.43%), Postives = 122/147 (82.99%), Query Frame = 0

Query:   77 VLRFVTNNFKPYSESTIGASFMSKMIMIETTPIKFQIWDTAGQEKYHSLAPMYYRGAGAAIIVYDITNRQSFKTLKDWVGELQQQGPPDIVIAIAGNKRDLEADREVEVSTARAYAEEIGAMFFETSAKDDTNVYNVFVELSKHLPE 223
            VLRFVTN FKPYSESTIGASFM+KM++I++TPIK+QIWDTAGQEKYHSLAPMYYRGA AAI+VYDIT   SF TLK+WV EL+Q GP DIVIAIAGNK DL   REVE   AR YA  IGA++ ETSAK D+NV  +FV+++  LP+
Sbjct:    1 VLRFVTNTFKPYSESTIGASFMAKMMIIDSTPIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRAASFATLKNWVRELKQLGPEDIVIAIAGNKSDLAPQREVEEEDAREYARSIGALYIETSAKTDSNVKQLFVDIAMRLPD 147

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig5269.2.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig5269.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KE80_9PHAE	1.330e-87	72.40	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
F0WNT1_9STRA	1.860e-77	73.05	Rab5 family GTPase putative n=3 Tax=Albugo TaxID=6...	[more]
D0N0I0_PHYIT	2.300e-76	71.76	Rab5 family GTPase, putative n=2 Tax=Phytophthora ...	[more]
K3X978_GLOUD	3.150e-76	72.46	Uncharacterized protein n=22 Tax=Oomycota TaxID=47...	[more]
A0A7S2SUM8_9STRA	8.160e-74	62.50	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A067CI89_SAPPC	2.590e-72	69.46	Uncharacterized protein n=7 Tax=Saprolegniaceae Ta...	[more]
A0A7S1CIP5_9STRA	6.950e-72	69.64	Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20...	[more]
A0A3R7AA57_9STRA	9.190e-70	69.46	Uncharacterized protein n=4 Tax=Aphanomyces astaci...	[more]
A0A5D6XGD9_9STRA	1.370e-68	67.39	Uncharacterized protein n=1 Tax=Pythium brassicum ...	[more]
A0A7S1CIJ3_9STRA	2.560e-67	71.43	Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 164..177 score: 42.07 coord: 61..82 score: 34.04 coord: 199..221 score: 38.99 coord: 102..124 score: 44.91 coord: 84..100 score: 30.04
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 70..224 e-value: 5.6E-66 score: 235.2
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 56..224 e-value: 8.4E-20 score: 81.8
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 70..245 e-value: 1.7E-4 score: 15.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 223..246
None	No IPR available	PANTHER	PTHR47977	LD21953P-RELATED	coord: 69..224
None	No IPR available	PANTHER	PTHR47977:SF13	RAS-RELATED PROTEIN RAB-5C	coord: 69..224
None	No IPR available	PROSITE	PS51419	RAB	coord: 56..246 score: 29.617863
None	No IPR available	CDD	cd01860	Rab5_related	coord: 70..221 e-value: 1.54079E-90 score: 262.488
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 70..224 e-value: 1.6E-9 score: 3.1
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 70..221 e-value: 7.7E-53 score: 178.4
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 54..246 score: 14.243045
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 70..214 e-value: 5.5E-22 score: 76.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 67..246 e-value: 1.8E-57 score: 195.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 69..227

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig5269	contig	P-wetherbeei_contig5269:2328..3068 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig5269.2.1	mRNA_P-wetherbeei_contig5269.2.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig5269 1928..3405 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig5269.2.1 ID=prot_P-wetherbeei_contig5269.2.1|Name=mRNA_P-wetherbeei_contig5269.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=247bp
MSLSTLIGHCESFKSGVLVPIARKAFSHDTAVVIFRILAVTIVRSSPRSP
FYNRISRNVKWVRVASKPIGVGKSSLVLRFVTNNFKPYSESTIGASFMSK
MIMIETTPIKFQIWDTAGQEKYHSLAPMYYRGAGAAIIVYDITNRQSFKT
LKDWVGELQQQGPPDIVIAIAGNKRDLEADREVEVSTARAYAEEIGAMFF
ETSAKDDTNVYNVFVELSKHLPEREPPPAPAKIDLSTSPSSSSSCC*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001806	Small_GTPase
IPR005225	Small_GTP-bd_dom
IPR027417	P-loop_NTPase